RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 CHORDC1Q9UHD1 332 aaPredicted RBP16.23■□□□□ 0.19
CUX1-214ENST00000550008 FMN2Q9NZ56 1722 aa16.23■□□□□ 0.19
CUX1-214ENST00000550008 CA8P35219 290 aa16.23■□□□□ 0.19
CUX1-214ENST00000550008 EPHB4P54760 987 aa16.23■□□□□ 0.19
CUX1-214ENST00000550008 FAM160B1Q5W0V3 765 aa16.23■□□□□ 0.19
CUX1-214ENST00000550008 GJB7Q6PEY0 223 aa16.23■□□□□ 0.19
CUX1-214ENST00000550008 CDHR1Q96JP9 859 aa16.23■□□□□ 0.19
CUX1-214ENST00000550008 MSTO1Q9BUK6 570 aa16.23■□□□□ 0.19
CUX1-214ENST00000550008 EHD2Q9NZN4 543 aa16.23■□□□□ 0.19
CUX1-214ENST00000550008 TTLL3Q9Y4R7 772 aa16.23■□□□□ 0.19
CUX1-214ENST00000550008 FHOD1Q9Y613 1164 aa16.23■□□□□ 0.19
CUX1-214ENST00000550008 ZNF233A6NK53 670 aa16.23■□□□□ 0.19
CUX1-214ENST00000550008 INTS8Q75QN2 995 aaKnown RBP16.23■□□□□ 0.19
CUX1-214ENST00000550008 LRRN4CLQ8ND94 238 aa16.23■□□□□ 0.19
CUX1-214ENST00000550008 NSUN6Q8TEA1 469 aaKnown RBP16.23■□□□□ 0.19
CUX1-214ENST00000550008 FAM151AQ8WW52 585 aa16.23■□□□□ 0.19
CUX1-214ENST00000550008 ESYT2A0FGR8 921 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 STIM2Q9P246 746 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 AKAP12Q02952 1782 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 MAP3K9P80192 1104 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 R3HDM1Q15032 1099 aaKnown RBP16.22■□□□□ 0.19
CUX1-214ENST00000550008 PPP2R5AQ15172 486 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 SLC15A2Q16348 729 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 TTI2Q6NXR4 508 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 CCDC89Q8N998 374 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 TACC3Q9Y6A5 838 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 H0YCG3 227 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 MSH4O15457 936 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 VAMP7P51809 220 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 CYP4F22Q6NT55 531 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 GIMAP7Q8NHV1 300 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 RAB20Q9NX57 234 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 KCNG1Q9UIX4 513 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 LTN1O94822 1766 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 TCHHQ07283 1943 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 CYP11B2P19099 503 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 FXR2P51116 673 aaKnown RBP eCLIP16.22■□□□□ 0.19
CUX1-214ENST00000550008 MTMR3Q13615 1198 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 RNF34Q969K3 372 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 TBC1D22BQ9NU19 505 aa16.22■□□□□ 0.19
CUX1-214ENST00000550008 CNGA1P29973 690 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 EPHA7Q15375 998 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 NBPF9Q3BBW0 867 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 CERS5Q8N5B7 392 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 ZDHHC15Q96MV8 337 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 ADPGKQ9BRR6 497 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 HEMGNQ9BXL5 484 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 LACRTQ9GZZ8 138 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 SEMA6BQ9H3T3 888 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 ADAM21Q9UKJ8 722 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 SNX24Q9Y343 169 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 INPP5BP32019 993 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 PSMC6P62333 389 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 SGO2Q562F6 1265 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 CTAGE3PQ8IX95 158 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 DAGLBQ8NCG7 672 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 INTS2Q9H0H0 1204 aaKnown RBP16.21■□□□□ 0.19
CUX1-214ENST00000550008 TXNDC16Q9P2K2 825 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 PNMA2Q9UL42 364 aa16.21■□□□□ 0.19
CUX1-214ENST00000550008 DAPK3O43293 454 aa16.21■□□□□ 0.18
CUX1-214ENST00000550008 UCHL3P15374 230 aa16.21■□□□□ 0.18
CUX1-214ENST00000550008 ZNF18P17022 549 aa16.21■□□□□ 0.18
CUX1-214ENST00000550008 RHBDL3P58872 404 aa16.21■□□□□ 0.18
CUX1-214ENST00000550008 APBA1Q02410 837 aa16.21■□□□□ 0.18
CUX1-214ENST00000550008 ANGEL2Q5VTE6 544 aaKnown RBP16.21■□□□□ 0.18
CUX1-214ENST00000550008 CASC4Q6P4E1 433 aa16.21■□□□□ 0.18
CUX1-214ENST00000550008 RPUSD2Q8IZ73 545 aaKnown RBP16.21■□□□□ 0.18
CUX1-214ENST00000550008 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.21■□□□□ 0.18
CUX1-214ENST00000550008 HAUS1Q96CS2 278 aa16.21■□□□□ 0.18
CUX1-214ENST00000550008 KIFC3Q9BVG8 833 aa16.21■□□□□ 0.18
CUX1-214ENST00000550008 FAM49AQ9H0Q0 323 aaPredicted RBP16.21■□□□□ 0.18
CUX1-214ENST00000550008 RIOX1Q9H6W3 641 aa16.21■□□□□ 0.18
CUX1-214ENST00000550008 RPA1P27694 616 aa16.2■□□□□ 0.18
CUX1-214ENST00000550008 APOBEC3HQ6NTF7 200 aaKnown RBP16.2■□□□□ 0.18
CUX1-214ENST00000550008 C7orf31Q8N865 590 aa16.2■□□□□ 0.18
CUX1-214ENST00000550008 LRRC1Q9BTT6 524 aa16.2■□□□□ 0.18
CUX1-214ENST00000550008 RUSC1Q9BVN2 902 aa16.2■□□□□ 0.18
CUX1-214ENST00000550008 FTLP02792 175 aaPredicted RBP16.2■□□□□ 0.18
CUX1-214ENST00000550008 TERF2Q15554 542 aa16.2■□□□□ 0.18
CUX1-214ENST00000550008 SPATA4Q8NEY3 305 aa16.2■□□□□ 0.18
CUX1-214ENST00000550008 FBF1Q8TES7 1133 aa16.2■□□□□ 0.18
CUX1-214ENST00000550008 ATG4CQ96DT6 458 aa16.2■□□□□ 0.18
CUX1-214ENST00000550008 RASSF4Q9H2L5 321 aa16.2■□□□□ 0.18
CUX1-214ENST00000550008 YWHABP31946 246 aaKnown RBP16.2■□□□□ 0.18
CUX1-214ENST00000550008 STXBP2Q15833 593 aa16.2■□□□□ 0.18
CUX1-214ENST00000550008 SHROOM1Q2M3G4 852 aaPredicted RBP16.2■□□□□ 0.18
CUX1-214ENST00000550008 KCNK18Q7Z418 384 aa16.2■□□□□ 0.18
CUX1-214ENST00000550008 RIN2Q8WYP3 895 aaPredicted RBP16.2■□□□□ 0.18
CUX1-214ENST00000550008 ZKSCAN4Q969J2 545 aaPredicted RBP16.2■□□□□ 0.18
CUX1-214ENST00000550008 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.19■□□□□ 0.18
CUX1-214ENST00000550008 ATP2A2P16615 1042 aaKnown RBP16.19■□□□□ 0.18
CUX1-214ENST00000550008 KCNJ6P48051 423 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 SARSP49591 514 aaKnown RBP16.19■□□□□ 0.18
CUX1-214ENST00000550008 CASP4P49662 377 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 SLC8A3P57103 927 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 KRT76Q01546 638 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 IFRD2Q12894 506 aaPredicted RBP16.19■□□□□ 0.18
CUX1-214ENST00000550008 DEFB129Q9H1M3 183 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 ANAPC7Q9UJX3 599 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 C11orf70Q9BRQ4 267 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms