RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 SRGAP1Q7Z6B7 1085 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 CCDC155Q8N6L0 562 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 GPR161Q8N6U8 529 aaKnown RBP10.97□□□□□ -0.65
RAB5B-206ENST00000549505 MSANTD4Q8NCY6 345 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 OLIG1Q8TAK6 271 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 RUBCNQ92622 972 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 RMDN3Q96TC7 470 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 SYT11Q9BT88 431 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 AGPAT3Q9NRZ7 376 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 FBXO40Q9UH90 709 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 KCNG1Q9UIX4 513 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 INTUQ9ULD6 942 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 LRRC53A6NM62 1247 aa10.96□□□□□ -0.65
RAB5B-206ENST00000549505 KRT86O43790 486 aa10.96□□□□□ -0.65
RAB5B-206ENST00000549505 PADI6Q6TGC4 694 aa10.96□□□□□ -0.65
RAB5B-206ENST00000549505 RPGRIP1Q96KN7 1286 aa10.96□□□□□ -0.65
RAB5B-206ENST00000549505 RAB21Q9UL25 225 aa10.96□□□□□ -0.65
RAB5B-206ENST00000549505 GJA3Q9Y6H8 435 aa10.96□□□□□ -0.65
RAB5B-206ENST00000549505 A0A0U1RQJ8 604 aa10.96□□□□□ -0.66
RAB5B-206ENST00000549505 HIP1RO75146 1068 aa10.96□□□□□ -0.66
RAB5B-206ENST00000549505 NR3C2P08235 984 aa10.96□□□□□ -0.66
RAB5B-206ENST00000549505 EPB41P11171 864 aaKnown RBP10.96□□□□□ -0.66
RAB5B-206ENST00000549505 PON1P27169 355 aa10.96□□□□□ -0.66
RAB5B-206ENST00000549505 CYP4A11Q02928 519 aa10.96□□□□□ -0.66
RAB5B-206ENST00000549505 IRF2BP2Q7Z5L9 587 aa10.96□□□□□ -0.66
RAB5B-206ENST00000549505 ATRIPQ8WXE1 791 aa10.96□□□□□ -0.66
RAB5B-206ENST00000549505 ZNF592Q92610 1267 aa10.96□□□□□ -0.66
RAB5B-206ENST00000549505 ZKSCAN4Q969J2 545 aaPredicted RBP10.96□□□□□ -0.66
RAB5B-206ENST00000549505 WNK4Q96J92 1243 aa10.96□□□□□ -0.66
RAB5B-206ENST00000549505 DRC1Q96MC2 740 aa10.96□□□□□ -0.66
RAB5B-206ENST00000549505 TMOD4Q9NZQ9 345 aa10.96□□□□□ -0.66
RAB5B-206ENST00000549505 ARHGEF35A5YM69 484 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 SSBP05455 408 aaKnown RBP eCLIP10.95□□□□□ -0.66
RAB5B-206ENST00000549505 MOGSQ13724 837 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 ABHD15Q6UXT9 468 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 USP50Q70EL3 339 aaPredicted RBP10.95□□□□□ -0.66
RAB5B-206ENST00000549505 PIGOQ8TEQ8 1089 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 HNRNPLLQ8WVV9 542 aaKnown RBP10.95□□□□□ -0.66
RAB5B-206ENST00000549505 FBXL18Q96ME1 805 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 CEP89Q96ST8 783 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 CES2O00748 559 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 PRPF6O94906 941 aaKnown RBP10.95□□□□□ -0.66
RAB5B-206ENST00000549505 EPS15P42566 896 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 KIF11P52732 1056 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 BAATQ14032 418 aaPredicted RBP10.95□□□□□ -0.66
RAB5B-206ENST00000549505 ARHGAP29Q52LW3 1261 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 SLC35F6Q8N357 371 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 CALR3Q96L12 384 aaKnown RBP10.95□□□□□ -0.66
RAB5B-206ENST00000549505 CCDC94Q9BW85 323 aaPredicted RBP10.95□□□□□ -0.66
RAB5B-206ENST00000549505 TBC1D7Q9P0N9 293 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 LARSQ9P2J5 1176 aaKnown RBP10.95□□□□□ -0.66
RAB5B-206ENST00000549505 PCDHA13Q9Y5I0 950 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 RCCD1A6NED2 376 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 POTEB2H3BUK9 544 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 GCNT3O95395 438 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 XRCC5P13010 732 aaKnown RBP10.95□□□□□ -0.66
RAB5B-206ENST00000549505 YWHABP31946 246 aaKnown RBP10.95□□□□□ -0.66
RAB5B-206ENST00000549505 SFMBT2Q5VUG0 894 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 ARHGEF16Q5VV41 709 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 NELFCDQ8IXH7 590 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 LMO3Q8TAP4 145 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 JAKMIP2Q96AA8 810 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 GBP3Q9H0R5 595 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 SPON1Q9HCB6 807 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 A1CFQ9NQ94 594 aaKnown RBP10.95□□□□□ -0.66
RAB5B-206ENST00000549505 PCDHA10Q9Y5I2 948 aa10.95□□□□□ -0.66
RAB5B-206ENST00000549505 KIAA1217Q5T5P2 1943 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 ZNF236Q9UL36 1845 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 SPDYE5A6NIY4 337 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 ATP9AO75110 1047 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 ZRANB2O95218 330 aaKnown RBP eCLIP10.94□□□□□ -0.66
RAB5B-206ENST00000549505 ABL1P00519 1130 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 PIGRP01833 764 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 CACNB1Q02641 598 aaPredicted RBP10.94□□□□□ -0.66
RAB5B-206ENST00000549505 SLC18A3Q16572 532 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 ZNF569Q5MCW4 686 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 SNRNP48Q6IEG0 339 aaKnown RBP10.94□□□□□ -0.66
RAB5B-206ENST00000549505 FAM178BQ8IXR5 827 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 MYCT1Q8N699 235 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 AFAP1L1Q8TED9 768 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 KIFAP3Q92845 792 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 CCDC42Q96M95 316 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 ACCSQ96QU6 501 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 NIFKQ9BYG3 293 aaKnown RBP10.94□□□□□ -0.66
RAB5B-206ENST00000549505 MAFBQ9Y5Q3 323 aaPredicted RBP10.94□□□□□ -0.66
RAB5B-206ENST00000549505 STYXL1Q9Y6J8 313 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 MYH11P35749 1972 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 A0A0A6YYK5 440 aaPredicted RBP10.94□□□□□ -0.66
RAB5B-206ENST00000549505 EIF3JO75822 258 aaKnown RBP10.94□□□□□ -0.66
RAB5B-206ENST00000549505 URI1O94763 535 aaPredicted RBP10.94□□□□□ -0.66
RAB5B-206ENST00000549505 EIF4A3P38919 411 aaKnown RBP10.94□□□□□ -0.66
RAB5B-206ENST00000549505 HMGCS2P54868 508 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 DGKZQ13574 1117 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 VGLL4Q14135 290 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 SLC9C1Q4G0N8 1177 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 GBP6Q6ZN66 633 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 MAP4K3Q8IVH8 894 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 LRRN4CLQ8ND94 238 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 TRIM58Q8NG06 486 aa10.94□□□□□ -0.66
RAB5B-206ENST00000549505 LSM14BQ9BX40 385 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms