RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 GOLGA8AA7E2F4 631 aa18.71■□□□□ 0.59
SSH1-208ENST00000548522 GOLGA8BA8MQT2 603 aa18.71■□□□□ 0.59
SSH1-208ENST00000548522 IPO5O00410 1097 aaKnown RBP18.71■□□□□ 0.59
SSH1-208ENST00000548522 FSCN2O14926 492 aa18.71■□□□□ 0.59
SSH1-208ENST00000548522 GPR32O75388 356 aa18.71■□□□□ 0.59
SSH1-208ENST00000548522 EXOSC10Q01780 885 aaKnown RBP18.71■□□□□ 0.59
SSH1-208ENST00000548522 UBE3AQ05086 875 aa18.71■□□□□ 0.59
SSH1-208ENST00000548522 PLPP4Q5VZY2 271 aa18.71■□□□□ 0.59
SSH1-208ENST00000548522 NIPA1Q7RTP0 329 aa18.71■□□□□ 0.59
SSH1-208ENST00000548522 PBXIP1Q96AQ6 731 aa18.71■□□□□ 0.59
SSH1-208ENST00000548522 CCDC136Q96JN2 1154 aa18.71■□□□□ 0.59
SSH1-208ENST00000548522 NEK1Q96PY6 1258 aa18.71■□□□□ 0.59
SSH1-208ENST00000548522 APOL5Q9BWW9 433 aa18.71■□□□□ 0.59
SSH1-208ENST00000548522 PHF7Q9BWX1 381 aaPredicted RBP18.71■□□□□ 0.59
SSH1-208ENST00000548522 TSHZ2Q9NRE2 1034 aa18.71■□□□□ 0.59
SSH1-208ENST00000548522 C1orf112Q9NSG2 853 aa18.71■□□□□ 0.59
SSH1-208ENST00000548522 RNF19AQ9NV58 838 aa18.71■□□□□ 0.59
SSH1-208ENST00000548522 KLF18A0A0U1RQI7 1052 aa18.7■□□□□ 0.58
SSH1-208ENST00000548522 SP100P23497 879 aaPredicted RBP18.7■□□□□ 0.58
SSH1-208ENST00000548522 CLCN3P51790 818 aa18.7■□□□□ 0.58
SSH1-208ENST00000548522 DSC3Q14574 896 aa18.7■□□□□ 0.58
SSH1-208ENST00000548522 ZNF484Q5JVG2 852 aa18.7■□□□□ 0.58
SSH1-208ENST00000548522 MIS18BP1Q6P0N0 1132 aa18.7■□□□□ 0.58
SSH1-208ENST00000548522 LLGL2Q6P1M3 1020 aa18.7■□□□□ 0.58
SSH1-208ENST00000548522 LRRC55Q6ZSA7 311 aa18.7■□□□□ 0.58
SSH1-208ENST00000548522 BMP8AQ7Z5Y6 402 aa18.7■□□□□ 0.58
SSH1-208ENST00000548522 CKAP2LQ8IYA6 745 aa18.7■□□□□ 0.58
SSH1-208ENST00000548522 METTL13Q8N6R0 699 aa18.7■□□□□ 0.58
SSH1-208ENST00000548522 ZNF668Q96K58 619 aaPredicted RBP18.7■□□□□ 0.58
SSH1-208ENST00000548522 TMEM161AQ9NX61 479 aa18.7■□□□□ 0.58
SSH1-208ENST00000548522 CFAP54Q96N23 3096 aa18.69■□□□□ 0.58
SSH1-208ENST00000548522 HIDE1A8MVS5 230 aa18.69■□□□□ 0.58
SSH1-208ENST00000548522 GPR182O15218 404 aa18.69■□□□□ 0.58
SSH1-208ENST00000548522 CRYBB1P53674 252 aaPredicted RBP18.69■□□□□ 0.58
SSH1-208ENST00000548522 KCNC3Q14003 757 aa18.69■□□□□ 0.58
SSH1-208ENST00000548522 TCF25Q9BQ70 676 aa18.69■□□□□ 0.58
SSH1-208ENST00000548522 ZNF577Q9BSK1 485 aa18.69■□□□□ 0.58
SSH1-208ENST00000548522 ATP6V0A4Q9HBG4 840 aa18.69■□□□□ 0.58
SSH1-208ENST00000548522 AAASQ9NRG9 546 aa18.69■□□□□ 0.58
SSH1-208ENST00000548522 hCG_1984214I3L0E3 225 aa18.68■□□□□ 0.58
SSH1-208ENST00000548522 CPA1P15085 419 aa18.68■□□□□ 0.58
SSH1-208ENST00000548522 ADD1P35611 737 aaKnown RBP18.68■□□□□ 0.58
SSH1-208ENST00000548522 VCPP55072 806 aaKnown RBP18.68■□□□□ 0.58
SSH1-208ENST00000548522 FAM189BP81408 668 aa18.68■□□□□ 0.58
SSH1-208ENST00000548522 TCF15Q12870 199 aa18.68■□□□□ 0.58
SSH1-208ENST00000548522 SYCE2Q6PIF2 218 aa18.68■□□□□ 0.58
SSH1-208ENST00000548522 DHX32Q7L7V1 743 aaKnown RBP18.68■□□□□ 0.58
SSH1-208ENST00000548522 TEX2Q8IWB9 1127 aa18.68■□□□□ 0.58
SSH1-208ENST00000548522 LRRC71Q8N4P6 559 aa18.68■□□□□ 0.58
SSH1-208ENST00000548522 ZNF713Q8N859 430 aaPredicted RBP18.68■□□□□ 0.58
SSH1-208ENST00000548522 RASGRP4Q8TDF6 673 aa18.68■□□□□ 0.58
SSH1-208ENST00000548522 ASIC4Q96FT7 647 aa18.68■□□□□ 0.58
SSH1-208ENST00000548522 CASD1Q96PB1 797 aa18.68■□□□□ 0.58
SSH1-208ENST00000548522 S1PR5Q9H228 398 aa18.68■□□□□ 0.58
SSH1-208ENST00000548522 MAFBQ9Y5Q3 323 aaPredicted RBP18.68■□□□□ 0.58
SSH1-208ENST00000548522 CACNA1HO95180 2353 aa18.67■□□□□ 0.58
SSH1-208ENST00000548522 CYP3A4P08684 503 aa18.67■□□□□ 0.58
SSH1-208ENST00000548522 ATF7P17544 494 aaPredicted RBP18.67■□□□□ 0.58
SSH1-208ENST00000548522 LAG3P18627 525 aa18.67■□□□□ 0.58
SSH1-208ENST00000548522 TECP42680 631 aa18.67■□□□□ 0.58
SSH1-208ENST00000548522 PFKFB3Q16875 520 aaPredicted RBP18.67■□□□□ 0.58
SSH1-208ENST00000548522 LINC01465Q8N7H1 131 aa18.67■□□□□ 0.58
SSH1-208ENST00000548522 BBXQ8WY36 941 aaPredicted RBP18.67■□□□□ 0.58
SSH1-208ENST00000548522 MRPS27Q92552 414 aaKnown RBP18.67■□□□□ 0.58
SSH1-208ENST00000548522 ENTPD7Q9NQZ7 604 aa18.67■□□□□ 0.58
SSH1-208ENST00000548522 GABBR1Q9UBS5 961 aa18.67■□□□□ 0.58
SSH1-208ENST00000548522 NAP1L2Q9ULW6 460 aaPredicted RBP18.67■□□□□ 0.58
SSH1-208ENST00000548522 NLRP11P59045 1033 aaKnown RBP18.66■□□□□ 0.58
SSH1-208ENST00000548522 PRR16Q569H4 304 aa18.66■□□□□ 0.58
SSH1-208ENST00000548522 CLLU1OSQ5K130 101 aa18.66■□□□□ 0.58
SSH1-208ENST00000548522 RNF20Q5VTR2 975 aa18.66■□□□□ 0.58
SSH1-208ENST00000548522 ZNF746Q6NUN9 644 aaPredicted RBP18.66■□□□□ 0.58
SSH1-208ENST00000548522 ANKRD54Q6NXT1 300 aa18.66■□□□□ 0.58
SSH1-208ENST00000548522 SUGP1Q8IWZ8 645 aaKnown RBP18.66■□□□□ 0.58
SSH1-208ENST00000548522 FBXL6Q8N531 539 aa18.66■□□□□ 0.58
SSH1-208ENST00000548522 RNF169Q8NCN4 708 aa18.66■□□□□ 0.58
SSH1-208ENST00000548522 LENG9Q96B70 501 aa18.66■□□□□ 0.58
SSH1-208ENST00000548522 CDCA3Q99618 268 aaPredicted RBP18.66■□□□□ 0.58
SSH1-208ENST00000548522 TMEM117Q9H0C3 514 aa18.66■□□□□ 0.58
SSH1-208ENST00000548522 ADAMTS10Q9H324 1103 aa18.66■□□□□ 0.58
SSH1-208ENST00000548522 ELAC1Q9H777 363 aaKnown RBP18.66■□□□□ 0.58
SSH1-208ENST00000548522 FAM86C1Q9NVL1 165 aa18.66■□□□□ 0.58
SSH1-208ENST00000548522 AKT3Q9Y243 479 aa18.66■□□□□ 0.58
SSH1-208ENST00000548522 KMT2EQ8IZD2 1858 aa18.66■□□□□ 0.58
SSH1-208ENST00000548522 ZNF862O60290 1169 aa18.65■□□□□ 0.58
SSH1-208ENST00000548522 PDGFBP01127 241 aaPredicted RBP18.65■□□□□ 0.58
SSH1-208ENST00000548522 FGFR4P22455 802 aa18.65■□□□□ 0.58
SSH1-208ENST00000548522 PTPN5P54829 565 aa18.65■□□□□ 0.58
SSH1-208ENST00000548522 PLCB3Q01970 1234 aa18.65■□□□□ 0.58
SSH1-208ENST00000548522 SIGLEC14Q08ET2 396 aa18.65■□□□□ 0.58
SSH1-208ENST00000548522 PKN1Q16512 942 aa18.65■□□□□ 0.58
SSH1-208ENST00000548522 UGCGQ16739 394 aa18.65■□□□□ 0.58
SSH1-208ENST00000548522 PTPN21Q16825 1174 aa18.65■□□□□ 0.58
SSH1-208ENST00000548522 ODR4Q5SWX8 454 aa18.65■□□□□ 0.58
SSH1-208ENST00000548522 KCNT2Q6UVM3 1135 aa18.65■□□□□ 0.58
SSH1-208ENST00000548522 TMEM184AQ6ZMB5 413 aa18.65■□□□□ 0.58
SSH1-208ENST00000548522 REXO1Q8N1G1 1221 aaKnown RBP18.65■□□□□ 0.58
SSH1-208ENST00000548522 LRRC43Q8N309 656 aa18.65■□□□□ 0.58
SSH1-208ENST00000548522 GLT8D2Q9H1C3 349 aa18.65■□□□□ 0.58
SSH1-208ENST00000548522 LZTS1Q9Y250 596 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms