RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 CDH22Q9UJ99 828 aa13.58□□□□□ -0.24
TRAFD1-205ENST00000548277 SAMM50Q9Y512 469 aa13.58□□□□□ -0.24
TRAFD1-205ENST00000548277 WDFY4Q6ZS81 3184 aa13.58□□□□□ -0.24
TRAFD1-205ENST00000548277 KLF18A0A0U1RQI7 1052 aa13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 ZBTB42B2RXF5 422 aa13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 DHX15O43143 795 aaKnown RBP13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 SREBF1P36956 1147 aa13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 CLK2P49760 499 aaKnown RBP13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 CLCN3P51790 818 aa13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 CRYBB1P53674 252 aaPredicted RBP13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 FUT2Q10981 343 aa13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 ADCK5Q3MIX3 580 aa13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 ODR4Q5SWX8 454 aa13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 LRRC55Q6ZSA7 311 aa13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 ZBTB33Q86T24 672 aa13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 TCF25Q9BQ70 676 aa13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 TSHZ2Q9NRE2 1034 aa13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 FAM86C1Q9NVL1 165 aa13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 BARHL2Q9NY43 387 aa13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 GABBR1Q9UBS5 961 aa13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 TCEAL9Q9UHQ7 104 aa13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 AKT3Q9Y243 479 aa13.57□□□□□ -0.24
TRAFD1-205ENST00000548277 HIDE1A8MVS5 230 aa13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 IPO5O00410 1097 aaKnown RBP13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 GPR32O75388 356 aa13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 C22orf31O95567 290 aa13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 CPA1P15085 419 aa13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 FGFR4P22455 802 aa13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 ADD1P35611 737 aaKnown RBP13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 NLRP11P59045 1033 aaKnown RBP13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 EXOSC10Q01780 885 aaKnown RBP13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 UBE3AQ05086 875 aa13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 AP3B2Q13367 1082 aa13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 RNF20Q5VTR2 975 aa13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 EFCAB12Q6NXP0 572 aa13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 DHX32Q7L7V1 743 aaKnown RBP13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 BMP8AQ7Z5Y6 402 aa13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 LRRC71Q8N4P6 559 aa13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 MRPS27Q92552 414 aaKnown RBP13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 FAM217BQ9NTX9 383 aaPredicted RBP13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 TMEM161AQ9NX61 479 aa13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 PUF60Q9UHX1 559 aaKnown RBP13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 COL1A2P08123 1366 aa13.56□□□□□ -0.24
TRAFD1-205ENST00000548277 IGLV3-22A0A075B6J6 115 aa13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 NT5C1B-RDH14C9J2C7 533 aa13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 FSCN2O14926 492 aa13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 ZSCAN20P17040 1043 aaPredicted RBP13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 LAG3P18627 525 aa13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 VCPP55072 806 aaKnown RBP13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 FGD1P98174 961 aa13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 CBX2Q14781 532 aaPredicted RBP13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 LONRF3Q496Y0 759 aa13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 PRR16Q569H4 304 aa13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 ANKRD54Q6NXT1 300 aa13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 PPP1R18Q6NYC8 613 aa13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 KCNT2Q6UVM3 1135 aa13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 TMC7Q7Z402 723 aa13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 RASEFQ8IZ41 740 aa13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 ABI1Q8IZP0 508 aa13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 FBXL6Q8N531 539 aa13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 RASGRP4Q8TDF6 673 aa13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 BBXQ8WY36 941 aaPredicted RBP13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 SCLT1Q96NL6 688 aa13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 CASD1Q96PB1 797 aa13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 RNF216Q9NWF9 866 aaPredicted RBP13.55□□□□□ -0.24
TRAFD1-205ENST00000548277 CSDE1O75534 798 aaKnown RBP13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 PDGFBP01127 241 aaPredicted RBP13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 PSAPP07602 524 aa13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 WEE2P0C1S8 567 aa13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 PTPN5P54829 565 aa13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 FAM189BP81408 668 aa13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 KRT17Q04695 432 aa13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 SIGLEC14Q08ET2 396 aa13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 TCF15Q12870 199 aa13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 DSC3Q14574 896 aa13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 SYCE2Q6PIF2 218 aa13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 NIPA1Q7RTP0 329 aa13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 SUSD6Q92537 303 aa13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 GJA10Q969M2 543 aa13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 CDCA3Q99618 268 aaPredicted RBP13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 TMEM117Q9H0C3 514 aa13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 S1PR5Q9H228 398 aa13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 TBC1D22BQ9NU19 505 aa13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 RNF19AQ9NV58 838 aa13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 PCDHA10Q9Y5I2 948 aa13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 MAFBQ9Y5Q3 323 aaPredicted RBP13.54□□□□□ -0.24
TRAFD1-205ENST00000548277 TRIOO75962 3097 aa13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 hCG_1984214I3L0E3 225 aa13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 CHMP2AO43633 222 aa13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 CYP3A4P08684 503 aa13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 SRGAP2BP0DMP2 458 aa13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 ATF7P17544 494 aaPredicted RBP13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 METAP2P50579 478 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 PFKFB3Q16875 520 aaPredicted RBP13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 PDE12Q6L8Q7 609 aaKnown RBP13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 ZNF746Q6NUN9 644 aaPredicted RBP13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 KANK3Q6NY19 840 aa13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 ECHDC2Q86YB7 292 aa13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 ZNF713Q8N859 430 aaPredicted RBP13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 HELQQ8TDG4 1101 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms