RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 METTL13Q8N6R0 699 aa12.69□□□□□ -0.38
CALCOCO1-208ENST00000547988 LINC01465Q8N7H1 131 aa12.69□□□□□ -0.38
CALCOCO1-208ENST00000547988 ZNF579Q8NAF0 562 aaKnown RBP12.69□□□□□ -0.38
CALCOCO1-208ENST00000547988 PIGOQ8TEQ8 1089 aa12.69□□□□□ -0.38
CALCOCO1-208ENST00000547988 BADQ92934 168 aa12.69□□□□□ -0.38
CALCOCO1-208ENST00000547988 ZBTB10Q96DT7 871 aa12.69□□□□□ -0.38
CALCOCO1-208ENST00000547988 CLIC6Q96NY7 704 aa12.69□□□□□ -0.38
CALCOCO1-208ENST00000547988 MAP7D2Q96T17 732 aa12.69□□□□□ -0.38
CALCOCO1-208ENST00000547988 SH2D3AQ9BRG2 576 aa12.69□□□□□ -0.38
CALCOCO1-208ENST00000547988 SCAND2PQ9GZW5 306 aaPredicted RBP12.69□□□□□ -0.38
CALCOCO1-208ENST00000547988 FAM49AQ9H0Q0 323 aaPredicted RBP12.69□□□□□ -0.38
CALCOCO1-208ENST00000547988 DDX19AQ9NUU7 478 aaKnown RBP12.69□□□□□ -0.38
CALCOCO1-208ENST00000547988 CHMP5Q9NZZ3 219 aa12.69□□□□□ -0.38
CALCOCO1-208ENST00000547988 M0QZ92 97 aa12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 DGAT1O75907 488 aa12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 EYA4O95677 639 aa12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 PFKMP08237 780 aa12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 MAGEA10P43363 369 aaPredicted RBP12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 DNM2P50570 870 aa12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 CCL23P55773 120 aa12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 MRPS6P82932 125 aaKnown RBP12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 FPGSQ05932 587 aa12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 GRB10Q13322 594 aa12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 PPIGQ13427 754 aaKnown RBP eCLIP12.68□□□□□ -0.383e-6■□□□□ 10.1
CALCOCO1-208ENST00000547988 EMC2Q15006 297 aa12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 TMEM119Q4V9L6 283 aa12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 TRAF7Q6Q0C0 670 aa12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 KIAA0319LQ8IZA0 1049 aa12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 RASSF8Q8NHQ8 419 aa12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 SYMPKQ92797 1274 aaKnown RBP12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 SPATA32Q96LK8 384 aa12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 PNMA5Q96PV4 448 aa12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 CCDC39Q9UFE4 941 aa12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 DNM3Q9UQ16 869 aa12.68□□□□□ -0.38
CALCOCO1-208ENST00000547988 ARHGEF35A5YM69 484 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 RSPH10B2B2RC85 870 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 CTSHP09668 335 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 RSPH10BP0C881 870 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 CSF2RAP15509 400 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 ME1P48163 572 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 CLCN3P51790 818 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 CDC42EP1Q00587 391 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 MDM2Q00987 491 aaPredicted RBP12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 MGAT3Q09327 533 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 ZRSR1Q15695 479 aaKnown RBP12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 SPECC1Q5M775 1068 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 PRPF38BQ5VTL8 546 aaKnown RBP12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 RPUSD2Q8IZ73 545 aaKnown RBP12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 LRRC71Q8N4P6 559 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 LEO1Q8WVC0 666 aaPredicted RBP12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 TCP11Q8WWU5 503 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 SCLYQ96I15 445 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 EPSTI1Q96J88 318 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 MTRQ99707 1265 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 GDF15Q99988 308 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 BHMT2Q9H2M3 363 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 SUGCTQ9HAC7 445 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 ATP6V0A4Q9HBG4 840 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 AKT3Q9Y243 479 aa12.67□□□□□ -0.38
CALCOCO1-208ENST00000547988 A0A087WWV3 80 aa12.66□□□□□ -0.38
CALCOCO1-208ENST00000547988 E9PMD0 336 aa12.66□□□□□ -0.38
CALCOCO1-208ENST00000547988 CHRNA1P02708 482 aa12.66□□□□□ -0.38
CALCOCO1-208ENST00000547988 KARSQ15046 597 aaKnown RBP12.66□□□□□ -0.38
CALCOCO1-208ENST00000547988 AXDND1Q5T1B0 1012 aaPredicted RBP12.66□□□□□ -0.38
CALCOCO1-208ENST00000547988 USP49Q70CQ1 688 aa12.66□□□□□ -0.38
CALCOCO1-208ENST00000547988 MCPH1Q8NEM0 835 aa12.66□□□□□ -0.38
CALCOCO1-208ENST00000547988 PSPC1Q8WXF1 523 aaKnown RBP12.66□□□□□ -0.38
CALCOCO1-208ENST00000547988 CELF4Q9BZC1 486 aaKnown RBP12.66□□□□□ -0.38
CALCOCO1-208ENST00000547988 IL23AQ9NPF7 189 aa12.66□□□□□ -0.38
CALCOCO1-208ENST00000547988 STK17AQ9UEE5 414 aa12.66□□□□□ -0.38
CALCOCO1-208ENST00000547988 PCDHA7Q9UN72 937 aa12.66□□□□□ -0.38
CALCOCO1-208ENST00000547988 TRPV2Q9Y5S1 764 aa12.66□□□□□ -0.38
CALCOCO1-208ENST00000547988 CDY2AQ9Y6F7 541 aa12.66□□□□□ -0.38
CALCOCO1-208ENST00000547988 SQORQ9Y6N5 450 aa12.66□□□□□ -0.38
CALCOCO1-208ENST00000547988 USO1O60763 962 aaKnown RBP12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 CXCL10P02778 98 aa12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 VTNP04004 478 aa12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 PLCG1P19174 1290 aa12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 BMP8BP34820 402 aa12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 TMEM62Q0P6H9 643 aa12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 MKRN4PQ13434 485 aaPredicted RBP12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 DRP2Q13474 957 aa12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 MBTPS1Q14703 1052 aa12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 ADALQ6DHV7 355 aa12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 PSRC1Q6PGN9 363 aaPredicted RBP12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 PADI6Q6TGC4 694 aa12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 CCDC73Q6ZRK6 1079 aa12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 KCNK18Q7Z418 384 aa12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 SYT2Q8N9I0 419 aaPredicted RBP12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 USP38Q8NB14 1042 aa12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 CHAMP1Q96JM3 812 aa12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 PLIN2Q99541 437 aa12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 XPNPEP1Q9NQW7 623 aa12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 KCND2Q9NZV8 630 aa12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 SUCLA2Q9P2R7 463 aaPredicted RBP12.65□□□□□ -0.38
CALCOCO1-208ENST00000547988 TTC3P53804 2025 aa12.64□□□□□ -0.39
CALCOCO1-208ENST00000547988 ASAP2O43150 1006 aa12.64□□□□□ -0.39
CALCOCO1-208ENST00000547988 NBNO60934 754 aa12.64□□□□□ -0.39
CALCOCO1-208ENST00000547988 GPR32O75388 356 aa12.64□□□□□ -0.39
CALCOCO1-208ENST00000547988 PLA2G4BP0C869 781 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms