RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 WRAP73Q9P2S5 460 aaPredicted RBP14.79□□□□□ -0.04
PTCH1-215ENST00000547672 PYCARDQ9ULZ3 195 aa14.79□□□□□ -0.04
PTCH1-215ENST00000547672 CAPN11Q9UMQ6 739 aa14.79□□□□□ -0.04
PTCH1-215ENST00000547672 MAFBQ9Y5Q3 323 aaPredicted RBP14.79□□□□□ -0.04
PTCH1-215ENST00000547672 KIAA1217Q5T5P2 1943 aa14.78□□□□□ -0.04
PTCH1-215ENST00000547672 PHLPP2Q6ZVD8 1323 aa14.78□□□□□ -0.04
PTCH1-215ENST00000547672 RSPH10B2B2RC85 870 aa14.78□□□□□ -0.04
PTCH1-215ENST00000547672 GAS2O43903 313 aaKnown RBP14.78□□□□□ -0.04
PTCH1-215ENST00000547672 MFAP3LO75121 409 aa14.78□□□□□ -0.04
PTCH1-215ENST00000547672 PRPF6O94906 941 aaKnown RBP14.78□□□□□ -0.04
PTCH1-215ENST00000547672 NR3C1P04150 777 aa14.78□□□□□ -0.04
PTCH1-215ENST00000547672 RSPH10BP0C881 870 aa14.78□□□□□ -0.04
PTCH1-215ENST00000547672 TRIM21P19474 475 aaKnown RBP14.78□□□□□ -0.04
PTCH1-215ENST00000547672 PSMC2P35998 433 aaKnown RBP14.78□□□□□ -0.04
PTCH1-215ENST00000547672 HUNKP57058 714 aa14.78□□□□□ -0.04
PTCH1-215ENST00000547672 DMP1Q13316 513 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-215ENST00000547672 IRF5Q13568 498 aa14.78□□□□□ -0.04
PTCH1-215ENST00000547672 FAM110CQ1W6H9 321 aa14.78□□□□□ -0.04
PTCH1-215ENST00000547672 CYP26C1Q6V0L0 522 aa14.78□□□□□ -0.04
PTCH1-215ENST00000547672 TC2NQ8N9U0 490 aa14.78□□□□□ -0.04
PTCH1-215ENST00000547672 AFAP1L1Q8TED9 768 aa14.78□□□□□ -0.04
PTCH1-215ENST00000547672 BRI3BPQ8WY22 251 aa14.78□□□□□ -0.04
PTCH1-215ENST00000547672 NIFKQ9BYG3 293 aaKnown RBP14.78□□□□□ -0.04
PTCH1-215ENST00000547672 ATP6V0A4Q9HBG4 840 aa14.78□□□□□ -0.04
PTCH1-215ENST00000547672 VTA1Q9NP79 307 aa14.78□□□□□ -0.04
PTCH1-215ENST00000547672 DAAM1Q9Y4D1 1078 aa14.78□□□□□ -0.04
PTCH1-215ENST00000547672 IGKV6D-21A0A0A0MT36 114 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 SLC15A5A6NIM6 579 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 SFI1A8K8P3 1242 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 NOP56O00567 594 aaKnown RBP14.77□□□□□ -0.05
PTCH1-215ENST00000547672 ZBTB39O15060 712 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 USO1O60763 962 aaKnown RBP14.77□□□□□ -0.05
PTCH1-215ENST00000547672 ITGBL1O95965 494 aaPredicted RBP14.77□□□□□ -0.05
PTCH1-215ENST00000547672 MYBP10242 640 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 CYP2C8P10632 490 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 KRT9P35527 623 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 STAT5BP51692 787 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 ZNF157P51786 506 aaPredicted RBP14.77□□□□□ -0.05
PTCH1-215ENST00000547672 ZBED6P86452 979 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 CELF3Q5SZQ8 465 aaKnown RBP14.77□□□□□ -0.05
PTCH1-215ENST00000547672 FAM102BQ5T8I3 360 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 PLPPR4Q7Z2D5 763 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 USP37Q86T82 979 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 FMNL3Q8IVF7 1028 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 TRIM59Q8IWR1 403 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 DHX37Q8IY37 1157 aaKnown RBP14.77□□□□□ -0.05
PTCH1-215ENST00000547672 ANKRD13CQ8N6S4 541 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 CPLX3Q8WVH0 158 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 CCDC102AQ96A19 550 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 STRA6Q9BX79 667 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 CYP26B1Q9NR63 512 aa14.77□□□□□ -0.05
PTCH1-215ENST00000547672 DDX41Q9UJV9 622 aaKnown RBP14.77□□□□□ -0.05
PTCH1-215ENST00000547672 SYNGAP1Q96PV0 1343 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 IGSF9BQ9UPX0 1349 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 K7ENM7 598 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 MAPK13O15264 365 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 FARP2O94887 1054 aaPredicted RBP14.76□□□□□ -0.05
PTCH1-215ENST00000547672 GGPS1O95749 300 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 OATP04181 439 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 XRCC5P13010 732 aaKnown RBP14.76□□□□□ -0.05
PTCH1-215ENST00000547672 UBA1P22314 1058 aaKnown RBP14.76□□□□□ -0.05
PTCH1-215ENST00000547672 CASP14P31944 242 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 TERF1P54274 439 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 ADKP55263 362 aaKnown RBP14.76□□□□□ -0.05
PTCH1-215ENST00000547672 GTF2BQ00403 316 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 PRKCEQ02156 737 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 LAMC2Q13753 1193 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 ARID5BQ14865 1188 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 SYCP1Q15431 976 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 PTPN14Q15678 1187 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 MIIPQ5JXC2 388 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 UTP14CQ5TAP6 766 aaKnown RBP14.76□□□□□ -0.05
PTCH1-215ENST00000547672 ANO5Q75V66 913 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 HAUS6Q7Z4H7 955 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 PLEKHH3Q7Z736 793 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 DPP9Q86TI2 863 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 C12orf56Q8IXR9 622 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 CCAR2Q8N163 923 aaKnown RBP14.76□□□□□ -0.05
PTCH1-215ENST00000547672 NEK11Q8NG66 645 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 SLC7A3Q8WY07 619 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 SEPT9Q9UHD8 586 aaPredicted RBP14.76□□□□□ -0.05
PTCH1-215ENST00000547672 PAXBP1Q9Y5B6 917 aa14.76□□□□□ -0.05
PTCH1-215ENST00000547672 KIAA0391O15091 583 aaKnown RBP14.75□□□□□ -0.05
PTCH1-215ENST00000547672 IPO7O95373 1038 aaKnown RBP14.75□□□□□ -0.05
PTCH1-215ENST00000547672 GYPCP04921 128 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 PGK2P07205 417 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 HOXC6P09630 235 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 TXNP10599 105 aaKnown RBP14.75□□□□□ -0.05
PTCH1-215ENST00000547672 KRT13P13646 458 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 FECHP22830 423 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 NMT1P30419 496 aaKnown RBP14.75□□□□□ -0.05
PTCH1-215ENST00000547672 POLGP54098 1239 aaPredicted RBP14.75□□□□□ -0.05
PTCH1-215ENST00000547672 NCKAP1LP55160 1127 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 SP2Q02086 613 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 CETN1Q12798 172 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 MAPK7Q13164 816 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 UGCGQ16739 394 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 ZNF792Q3KQV3 632 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 CST9Q5W186 159 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 RGMBQ6NW40 437 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms