RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 VTNP04004 478 aa16.23■□□□□ 0.19
COL2A1-209ENST00000546974 OATP04181 439 aa16.23■□□□□ 0.19
COL2A1-209ENST00000546974 PUS10Q3MIT2 529 aaKnown RBP16.23■□□□□ 0.19
COL2A1-209ENST00000546974 EFCAB12Q6NXP0 572 aa16.23■□□□□ 0.19
COL2A1-209ENST00000546974 SLC24A5Q71RS6 500 aa16.23■□□□□ 0.19
COL2A1-209ENST00000546974 FAM228AQ86W67 206 aa16.23■□□□□ 0.19
COL2A1-209ENST00000546974 LINC01465Q8N7H1 131 aa16.23■□□□□ 0.19
COL2A1-209ENST00000546974 MBOAT7Q96N66 472 aa16.23■□□□□ 0.19
COL2A1-209ENST00000546974 AIFM3Q96NN9 605 aa16.23■□□□□ 0.19
COL2A1-209ENST00000546974 OSMRQ99650 979 aa16.23■□□□□ 0.19
COL2A1-209ENST00000546974 ADAM2Q99965 735 aa16.23■□□□□ 0.19
COL2A1-209ENST00000546974 UNC45AQ9H3U1 944 aa16.23■□□□□ 0.19
COL2A1-209ENST00000546974 PPP4R2Q9NY27 417 aa16.23■□□□□ 0.19
COL2A1-209ENST00000546974 PLAGL2Q9UPG8 496 aa16.23■□□□□ 0.19
COL2A1-209ENST00000546974 C5orf42Q9H799 3197 aa16.22■□□□□ 0.19
COL2A1-209ENST00000546974 C9IYK1 514 aa16.22■□□□□ 0.19
COL2A1-209ENST00000546974 CHMP2AO43633 222 aa16.22■□□□□ 0.19
COL2A1-209ENST00000546974 TDP2O95551 362 aa16.22■□□□□ 0.19
COL2A1-209ENST00000546974 MMP1P03956 469 aa16.22■□□□□ 0.19
COL2A1-209ENST00000546974 CLCN3P51790 818 aa16.22■□□□□ 0.19
COL2A1-209ENST00000546974 PRKCEQ02156 737 aa16.22■□□□□ 0.19
COL2A1-209ENST00000546974 SCRN1Q12765 414 aa16.22■□□□□ 0.19
COL2A1-209ENST00000546974 PAN2Q504Q3 1202 aaKnown RBP16.22■□□□□ 0.19
COL2A1-209ENST00000546974 B3GNT9Q6UX72 402 aa16.22■□□□□ 0.19
COL2A1-209ENST00000546974 MIER3Q7Z3K6 550 aa16.22■□□□□ 0.19
COL2A1-209ENST00000546974 GJA10Q969M2 543 aa16.22■□□□□ 0.19
COL2A1-209ENST00000546974 MAP7D2Q96T17 732 aa16.22■□□□□ 0.19
COL2A1-209ENST00000546974 PPP1R16BQ96T49 567 aa16.22■□□□□ 0.19
COL2A1-209ENST00000546974 AKT3Q9Y243 479 aa16.22■□□□□ 0.19
COL2A1-209ENST00000546974 GRXCR2A6NFK2 248 aa16.21■□□□□ 0.19
COL2A1-209ENST00000546974 GATMP50440 423 aa16.21■□□□□ 0.19
COL2A1-209ENST00000546974 NLRP11P59045 1033 aaKnown RBP16.21■□□□□ 0.19
COL2A1-209ENST00000546974 ANAPC15P60006 121 aa16.21■□□□□ 0.19
COL2A1-209ENST00000546974 FAM189BP81408 668 aa16.21■□□□□ 0.19
COL2A1-209ENST00000546974 NONOQ15233 471 aaKnown RBP eCLIP16.21■□□□□ 0.19
COL2A1-209ENST00000546974 UGCGQ16739 394 aa16.21■□□□□ 0.19
COL2A1-209ENST00000546974 ERICH6BQ5W0A0 696 aa16.21■□□□□ 0.19
COL2A1-209ENST00000546974 PTCRAQ6ISU1 281 aaPredicted RBP16.21■□□□□ 0.19
COL2A1-209ENST00000546974 KRT25Q7Z3Z0 450 aa16.21■□□□□ 0.19
COL2A1-209ENST00000546974 ETNPPLQ8TBG4 499 aa16.21■□□□□ 0.19
COL2A1-209ENST00000546974 C1QTNF1Q9BXJ1 281 aa16.21■□□□□ 0.19
COL2A1-209ENST00000546974 SLKQ9H2G2 1235 aaPredicted RBP16.21■□□□□ 0.19
COL2A1-209ENST00000546974 ADAMTS10Q9H324 1103 aa16.21■□□□□ 0.19
COL2A1-209ENST00000546974 ELAC1Q9H777 363 aaKnown RBP16.21■□□□□ 0.19
COL2A1-209ENST00000546974 ALG13Q9NP73 1137 aaKnown RBP16.21■□□□□ 0.19
COL2A1-209ENST00000546974 STK36Q9NRP7 1315 aa16.2■□□□□ 0.18
COL2A1-209ENST00000546974 PFKFB2O60825 505 aa16.2■□□□□ 0.18
COL2A1-209ENST00000546974 ITGB1P05556 798 aa16.2■□□□□ 0.18
COL2A1-209ENST00000546974 XBP1P17861 261 aa16.2■□□□□ 0.18
COL2A1-209ENST00000546974 CAMK1Q14012 370 aa16.2■□□□□ 0.18
COL2A1-209ENST00000546974 DSC3Q14574 896 aa16.2■□□□□ 0.18
COL2A1-209ENST00000546974 TARBP2Q15633 366 aaKnown RBP16.2■□□□□ 0.18
COL2A1-209ENST00000546974 CTC1Q2NKJ3 1217 aa16.2■□□□□ 0.18
COL2A1-209ENST00000546974 FAM178BQ8IXR5 827 aa16.2■□□□□ 0.18
COL2A1-209ENST00000546974 LRRC71Q8N4P6 559 aa16.2■□□□□ 0.18
COL2A1-209ENST00000546974 KLHL23Q8NBE8 558 aa16.2■□□□□ 0.18
COL2A1-209ENST00000546974 SPPL3Q8TCT6 385 aa16.2■□□□□ 0.18
COL2A1-209ENST00000546974 PHF20Q9BVI0 1012 aa16.2■□□□□ 0.18
COL2A1-209ENST00000546974 NIFKQ9BYG3 293 aaKnown RBP16.2■□□□□ 0.18
COL2A1-209ENST00000546974 CLDND1Q9NY35 253 aa16.2■□□□□ 0.18
COL2A1-209ENST00000546974 DDX25Q9UHL0 483 aaKnown RBP16.2■□□□□ 0.18
COL2A1-209ENST00000546974 TPCN1Q9ULQ1 816 aa16.2■□□□□ 0.18
COL2A1-209ENST00000546974 KCNJ14Q9UNX9 436 aa16.2■□□□□ 0.18
COL2A1-209ENST00000546974 PLXNA4Q9HCM2 1894 aa16.19■□□□□ 0.18
COL2A1-209ENST00000546974 H3BQ06 376 aaPredicted RBP16.19■□□□□ 0.18
COL2A1-209ENST00000546974 IL9P15248 144 aa16.19■□□□□ 0.18
COL2A1-209ENST00000546974 IBSPP21815 317 aaPredicted RBP16.19■□□□□ 0.18
COL2A1-209ENST00000546974 EIF4BP23588 611 aaKnown RBP16.19■□□□□ 0.18
COL2A1-209ENST00000546974 GPC3P51654 580 aa16.19■□□□□ 0.18
COL2A1-209ENST00000546974 TBC1D8BQ0IIM8 1120 aa16.19■□□□□ 0.18
COL2A1-209ENST00000546974 HYAL1Q12794 435 aa16.19■□□□□ 0.18
COL2A1-209ENST00000546974 ANKRD1Q15327 319 aa16.19■□□□□ 0.18
COL2A1-209ENST00000546974 INF2Q27J81 1249 aa16.19■□□□□ 0.18
COL2A1-209ENST00000546974 XKR3Q5GH77 459 aa16.19■□□□□ 0.18
COL2A1-209ENST00000546974 FAM102BQ5T8I3 360 aa16.19■□□□□ 0.18
COL2A1-209ENST00000546974 EP400NLQ6ZTU2 488 aa16.19■□□□□ 0.18
COL2A1-209ENST00000546974 PPP2R3CQ969Q6 453 aa16.19■□□□□ 0.18
COL2A1-209ENST00000546974 ATP6V0A4Q9HBG4 840 aa16.19■□□□□ 0.18
COL2A1-209ENST00000546974 TMEM161AQ9NX61 479 aa16.19■□□□□ 0.18
COL2A1-209ENST00000546974 FAM50BQ9Y247 325 aa16.19■□□□□ 0.18
COL2A1-209ENST00000546974 CCDC194A0A1B0GVG4 234 aa16.18■□□□□ 0.18
COL2A1-209ENST00000546974 TBKBP1A7MCY6 615 aa16.18■□□□□ 0.18
COL2A1-209ENST00000546974 STBD1O95210 358 aa16.18■□□□□ 0.18
COL2A1-209ENST00000546974 ZSCAN20P17040 1043 aaPredicted RBP16.18■□□□□ 0.18
COL2A1-209ENST00000546974 COL9A1P20849 921 aa16.18■□□□□ 0.18
COL2A1-209ENST00000546974 DNAJB1P25685 340 aa16.18■□□□□ 0.18
COL2A1-209ENST00000546974 LTBRP36941 435 aa16.18■□□□□ 0.18
COL2A1-209ENST00000546974 CDC42EP1Q00587 391 aa16.18■□□□□ 0.18
COL2A1-209ENST00000546974 LETM2Q2VYF4 491 aa16.18■□□□□ 0.18
COL2A1-209ENST00000546974 PPP4R3AQ6IN85 833 aa16.18■□□□□ 0.18
COL2A1-209ENST00000546974 POF1BQ8WVV4 589 aa16.18■□□□□ 0.18
COL2A1-209ENST00000546974 CEP89Q96ST8 783 aa16.18■□□□□ 0.18
COL2A1-209ENST00000546974 CD320Q9NPF0 282 aa16.18■□□□□ 0.18
COL2A1-209ENST00000546974 AAASQ9NRG9 546 aa16.18■□□□□ 0.18
COL2A1-209ENST00000546974 SEPT9Q9UHD8 586 aaPredicted RBP16.18■□□□□ 0.18
COL2A1-209ENST00000546974 PCDHB12Q9Y5F1 795 aa16.18■□□□□ 0.18
COL2A1-209ENST00000546974 IGKV6-21A0A0C4DH24 114 aa16.17■□□□□ 0.18
COL2A1-209ENST00000546974 DARSP14868 501 aaKnown RBP16.17■□□□□ 0.18
COL2A1-209ENST00000546974 GCFC2P16383 781 aaKnown RBP16.17■□□□□ 0.18
COL2A1-209ENST00000546974 UBE3AQ05086 875 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms