RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 MAP7D2Q96T17 732 aa16.15■□□□□ 0.18
DDX54-203ENST00000546869 FTOQ9C0B1 505 aaKnown RBP eCLIP16.15■□□□□ 0.18
DDX54-203ENST00000546869 FAM49AQ9H0Q0 323 aaPredicted RBP16.15■□□□□ 0.18
DDX54-203ENST00000546869 PCDH10Q9P2E7 1040 aa16.15■□□□□ 0.18
DDX54-203ENST00000546869 FBXO2Q9UK22 296 aaPredicted RBP16.15■□□□□ 0.18
DDX54-203ENST00000546869 ATP6V1DQ9Y5K8 247 aa16.15■□□□□ 0.18
DDX54-203ENST00000546869 TRPV2Q9Y5S1 764 aa16.15■□□□□ 0.18
DDX54-203ENST00000546869 WDR81Q562E7 1941 aa16.15■□□□□ 0.18
DDX54-203ENST00000546869 GPR32O75388 356 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 BAIAP3O94812 1187 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 ACRP10323 421 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 ACTN1P12814 892 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 CDC25AP30304 524 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 CRYBB1P53674 252 aaPredicted RBP16.14■□□□□ 0.17
DDX54-203ENST00000546869 SHHQ15465 462 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 ECM1Q16610 540 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 LRIT3Q3SXY7 679 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 PLEKHG4Q58EX7 1191 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 FBXO47Q5MNV8 452 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 CNKSR3Q6P9H4 555 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 PIGOQ8TEQ8 1089 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 TCP11Q8WWU5 503 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 APBB2Q92870 758 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 SH2D3AQ9BRG2 576 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 CCSER1Q9C0I3 900 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 SUGCTQ9HAC7 445 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 KIAA1024Q9UPX6 916 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 DNM3Q9UQ16 869 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 CDY2AQ9Y6F7 541 aa16.14■□□□□ 0.17
DDX54-203ENST00000546869 PP2D1A8MPX8 630 aa16.13■□□□□ 0.17
DDX54-203ENST00000546869 SPTLC2O15270 562 aa16.13■□□□□ 0.17
DDX54-203ENST00000546869 ASAP2O43150 1006 aa16.13■□□□□ 0.17
DDX54-203ENST00000546869 EFCAB14O75071 495 aa16.13■□□□□ 0.17
DDX54-203ENST00000546869 CTSHP09668 335 aa16.13■□□□□ 0.17
DDX54-203ENST00000546869 ANP32AP39687 249 aaKnown RBP16.13■□□□□ 0.17
DDX54-203ENST00000546869 UBA7P41226 1012 aa16.13■□□□□ 0.17
DDX54-203ENST00000546869 CLCN3P51790 818 aa16.13■□□□□ 0.17
DDX54-203ENST00000546869 POLGP54098 1239 aaPredicted RBP16.13■□□□□ 0.17
DDX54-203ENST00000546869 CEBPZQ03701 1054 aaKnown RBP16.13■□□□□ 0.17
DDX54-203ENST00000546869 POTEGQ6S5H5 508 aa16.13■□□□□ 0.17
DDX54-203ENST00000546869 DEFB128Q7Z7B8 93 aa16.13■□□□□ 0.17
DDX54-203ENST00000546869 LRRC71Q8N4P6 559 aa16.13■□□□□ 0.17
DDX54-203ENST00000546869 KRI1Q8N9T8 703 aaKnown RBP16.13■□□□□ 0.17
DDX54-203ENST00000546869 MTIF3Q9H2K0 278 aaKnown RBP16.13■□□□□ 0.17
DDX54-203ENST00000546869 ADAMTS10Q9H324 1103 aa16.13■□□□□ 0.17
DDX54-203ENST00000546869 DDX19AQ9NUU7 478 aaKnown RBP16.13■□□□□ 0.17
DDX54-203ENST00000546869 TFIP11Q9UBB9 837 aaKnown RBP16.13■□□□□ 0.17
DDX54-203ENST00000546869 RCOR1Q9UKL0 485 aa16.13■□□□□ 0.17
DDX54-203ENST00000546869 ABHD14A-ACY1A0A1B0GW23 586 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 EYA4O95677 639 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 MARCKSP29966 332 aaPredicted RBP16.12■□□□□ 0.17
DDX54-203ENST00000546869 GPC3P51654 580 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 GRIN1Q05586 938 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 POU5F1BQ06416 359 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 LPIN1Q14693 890 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 EMC2Q15006 297 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 STK38Q15208 465 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 TMEM119Q4V9L6 283 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 ODR4Q5SWX8 454 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 C9orf50Q5SZB4 431 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 FOXD4L5Q5VV16 416 aaPredicted RBP16.12■□□□□ 0.17
DDX54-203ENST00000546869 TSHZ1Q6ZSZ6 1077 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 CABP7Q86V35 215 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 ZNF410Q86VK4 478 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 KCNG4Q8TDN1 519 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 FOXD4L4Q8WXT5 416 aaPredicted RBP16.12■□□□□ 0.17
DDX54-203ENST00000546869 SEPT8Q92599 483 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 PNMA5Q96PV4 448 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 MTRQ99707 1265 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 CSRNP2Q9H175 543 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 ATP6V0A4Q9HBG4 840 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 XPNPEP1Q9NQW7 623 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 SUCLA2Q9P2R7 463 aaPredicted RBP16.12■□□□□ 0.17
DDX54-203ENST00000546869 AKT3Q9Y243 479 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 TANC1Q9C0D5 1861 aa16.12■□□□□ 0.17
DDX54-203ENST00000546869 CYP11B2P19099 503 aa16.11■□□□□ 0.17
DDX54-203ENST00000546869 NLRP11P59045 1033 aaKnown RBP16.11■□□□□ 0.17
DDX54-203ENST00000546869 DNM1Q05193 864 aaKnown RBP16.11■□□□□ 0.17
DDX54-203ENST00000546869 GRB10Q13322 594 aa16.11■□□□□ 0.17
DDX54-203ENST00000546869 DRP2Q13474 957 aa16.11■□□□□ 0.17
DDX54-203ENST00000546869 IKBKEQ14164 716 aa16.11■□□□□ 0.17
DDX54-203ENST00000546869 MXD4Q14582 209 aaPredicted RBP16.11■□□□□ 0.17
DDX54-203ENST00000546869 MCPH1Q8NEM0 835 aa16.11■□□□□ 0.17
DDX54-203ENST00000546869 DBF4BQ8NFT6 615 aa16.11■□□□□ 0.17
DDX54-203ENST00000546869 PHOSPHO2Q8TCD6 241 aa16.11■□□□□ 0.17
DDX54-203ENST00000546869 CALML4Q96GE6 196 aa16.11■□□□□ 0.17
DDX54-203ENST00000546869 CCDC43Q96MW1 224 aaKnown RBP16.11■□□□□ 0.17
DDX54-203ENST00000546869 CIZ1Q9ULV3 898 aaPredicted RBP16.11■□□□□ 0.17
DDX54-203ENST00000546869 A0A087WWV3 80 aa16.1■□□□□ 0.17
DDX54-203ENST00000546869 ARHGEF35A5YM69 484 aa16.1■□□□□ 0.17
DDX54-203ENST00000546869 E9PMD0 336 aa16.1■□□□□ 0.17
DDX54-203ENST00000546869 VTNP04004 478 aa16.1■□□□□ 0.17
DDX54-203ENST00000546869 EIF4BP23588 611 aaKnown RBP16.1■□□□□ 0.17
DDX54-203ENST00000546869 ARL2P36404 184 aa16.1■□□□□ 0.17
DDX54-203ENST00000546869 TMEM62Q0P6H9 643 aa16.1■□□□□ 0.17
DDX54-203ENST00000546869 KIZQ2M2Z5 673 aa16.1■□□□□ 0.17
DDX54-203ENST00000546869 HABP4Q5JVS0 413 aaKnown RBP16.1■□□□□ 0.17
DDX54-203ENST00000546869 PADI6Q6TGC4 694 aa16.1■□□□□ 0.17
DDX54-203ENST00000546869 OTOP2Q7RTS6 562 aa16.1■□□□□ 0.17
DDX54-203ENST00000546869 PRPF31Q8WWY3 499 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms