RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 CAPN14A8MX76 684 aa6.49□□□□□ -1.37
CCDC38-204ENST00000546816 GSTA4O15217 222 aa6.49□□□□□ -1.37
CCDC38-204ENST00000546816 MMEP08473 750 aa6.49□□□□□ -1.37
CCDC38-204ENST00000546816 NAT1P18440 290 aa6.49□□□□□ -1.37
CCDC38-204ENST00000546816 STAT5BP51692 787 aa6.49□□□□□ -1.37
CCDC38-204ENST00000546816 GABREP78334 506 aa6.49□□□□□ -1.37
CCDC38-204ENST00000546816 TM4SF20Q53R12 229 aa6.49□□□□□ -1.37
CCDC38-204ENST00000546816 GRAMD4Q6IC98 578 aa6.49□□□□□ -1.37
CCDC38-204ENST00000546816 Q6ZPA2 131 aa6.49□□□□□ -1.37
CCDC38-204ENST00000546816 MRGPRGQ86SM5 289 aa6.49□□□□□ -1.37
CCDC38-204ENST00000546816 NOSTRINQ8IVI9 506 aa6.49□□□□□ -1.37
CCDC38-204ENST00000546816 BCL6BQ8N143 479 aaPredicted RBP6.49□□□□□ -1.37
CCDC38-204ENST00000546816 THEMISQ8N1K5 641 aaPredicted RBP6.49□□□□□ -1.37
CCDC38-204ENST00000546816 ASB15Q8WXK1 588 aa6.49□□□□□ -1.37
CCDC38-204ENST00000546816 CLIP3Q96DZ5 547 aa6.49□□□□□ -1.37
CCDC38-204ENST00000546816 IPO9Q96P70 1041 aaKnown RBP6.49□□□□□ -1.37
CCDC38-204ENST00000546816 MRPS23Q9Y3D9 190 aaKnown RBP6.49□□□□□ -1.37
CCDC38-204ENST00000546816 PCDHA9Q9Y5H5 950 aa6.49□□□□□ -1.37
CCDC38-204ENST00000546816 MAFO75444 373 aaPredicted RBP6.48□□□□□ -1.37
CCDC38-204ENST00000546816 PEX11BO96011 259 aa6.48□□□□□ -1.37
CCDC38-204ENST00000546816 KRT4P19013 534 aa6.48□□□□□ -1.37
CCDC38-204ENST00000546816 RRP1BQ14684 758 aaKnown RBP6.48□□□□□ -1.37
CCDC38-204ENST00000546816 FAM47CQ5HY64 1035 aa6.48□□□□□ -1.37
CCDC38-204ENST00000546816 ULK2Q8IYT8 1036 aa6.48□□□□□ -1.37
CCDC38-204ENST00000546816 JMYQ8N9B5 988 aa6.48□□□□□ -1.37
CCDC38-204ENST00000546816 TMEM176AQ96HP8 235 aa6.48□□□□□ -1.37
CCDC38-204ENST00000546816 MPHOSPH9Q99550 1183 aa6.48□□□□□ -1.37
CCDC38-204ENST00000546816 PARPBPQ9NWS1 579 aa6.48□□□□□ -1.37
CCDC38-204ENST00000546816 DMRT1Q9Y5R6 373 aa6.48□□□□□ -1.37
CCDC38-204ENST00000546816 RASSF10A6NK89 507 aa6.47□□□□□ -1.37
CCDC38-204ENST00000546816 CYP27B1O15528 508 aa6.47□□□□□ -1.37
CCDC38-204ENST00000546816 CRTAMO95727 393 aa6.47□□□□□ -1.37
CCDC38-204ENST00000546816 DNM2P50570 870 aa6.47□□□□□ -1.37
CCDC38-204ENST00000546816 RIN1Q13671 783 aa6.47□□□□□ -1.37
CCDC38-204ENST00000546816 SAFB2Q14151 953 aaKnown RBP eCLIP6.47□□□□□ -1.37
CCDC38-204ENST00000546816 FSTL4Q6MZW2 842 aa6.47□□□□□ -1.37
CCDC38-204ENST00000546816 DNAJC10Q8IXB1 793 aa6.47□□□□□ -1.37
CCDC38-204ENST00000546816 WDR48Q8TAF3 677 aa6.47□□□□□ -1.37
CCDC38-204ENST00000546816 DNAJC7Q99615 494 aa6.47□□□□□ -1.37
CCDC38-204ENST00000546816 SLC2A4RGQ9NR83 387 aa6.47□□□□□ -1.37
CCDC38-204ENST00000546816 SH3BP1Q9Y3L3 701 aa6.47□□□□□ -1.37
CCDC38-204ENST00000546816 CTDP1Q9Y5B0 961 aaPredicted RBP6.47□□□□□ -1.37
CCDC38-204ENST00000546816 RABGGTAQ92696 567 aa6.46□□□□□ -1.38
CCDC38-204ENST00000546816 MKL1Q969V6 931 aa6.46□□□□□ -1.38
CCDC38-204ENST00000546816 PRRX2Q99811 253 aa6.46□□□□□ -1.38
CCDC38-204ENST00000546816 SLC52A2Q9HAB3 445 aa6.46□□□□□ -1.38
CCDC38-204ENST00000546816 FAM184BQ9ULE4 1060 aa6.46□□□□□ -1.38
CCDC38-204ENST00000546816 ASB1Q9Y576 335 aa6.46□□□□□ -1.38
CCDC38-204ENST00000546816 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.45□□□□□ -1.38
CCDC38-204ENST00000546816 PRAMEF22A3QJZ6 481 aa6.45□□□□□ -1.38
CCDC38-204ENST00000546816 SCDO00767 359 aa6.45□□□□□ -1.38
CCDC38-204ENST00000546816 SLC25A3Q00325 362 aa6.45□□□□□ -1.38
CCDC38-204ENST00000546816 ZC3H12BQ5HYM0 836 aaKnown RBP6.45□□□□□ -1.38
CCDC38-204ENST00000546816 ZC3H7AQ8IWR0 971 aaKnown RBP6.45□□□□□ -1.38
CCDC38-204ENST00000546816 GSTCDQ8NEC7 633 aa6.45□□□□□ -1.38
CCDC38-204ENST00000546816 SLC7A14Q8TBB6 771 aa6.45□□□□□ -1.38
CCDC38-204ENST00000546816 DLG3Q92796 817 aa6.45□□□□□ -1.38
CCDC38-204ENST00000546816 ZG16BQ96DA0 208 aa6.45□□□□□ -1.38
CCDC38-204ENST00000546816 GBP4Q96PP9 640 aa6.45□□□□□ -1.38
CCDC38-204ENST00000546816 SRPK1Q96SB4 655 aaKnown RBP6.45□□□□□ -1.38
CCDC38-204ENST00000546816 KCNH7Q9NS40 1196 aa6.45□□□□□ -1.38
CCDC38-204ENST00000546816 VWA7Q9Y334 891 aa6.45□□□□□ -1.38
CCDC38-204ENST00000546816 GOLGA6L22H0YM25 854 aa6.44□□□□□ -1.38
CCDC38-204ENST00000546816 FOXP2O15409 715 aa6.44□□□□□ -1.38
CCDC38-204ENST00000546816 SDHAP31040 664 aa6.44□□□□□ -1.38
CCDC38-204ENST00000546816 COL10A1Q03692 680 aa6.44□□□□□ -1.38
CCDC38-204ENST00000546816 CISD2Q8N5K1 135 aaKnown RBP6.44□□□□□ -1.38
CCDC38-204ENST00000546816 REXO2Q9Y3B8 237 aaKnown RBP6.44□□□□□ -1.38
CCDC38-204ENST00000546816 B3GALT1Q9Y5Z6 326 aa6.44□□□□□ -1.38
CCDC38-204ENST00000546816 PCSK5Q92824 1860 aa6.43□□□□□ -1.38
CCDC38-204ENST00000546816 APEX1P27695 318 aaKnown RBP6.43□□□□□ -1.38
CCDC38-204ENST00000546816 SCNN1GP51170 649 aa6.43□□□□□ -1.38
CCDC38-204ENST00000546816 ADCY7P51828 1080 aa6.43□□□□□ -1.38
CCDC38-204ENST00000546816 CRHR2Q13324 411 aa6.43□□□□□ -1.38
CCDC38-204ENST00000546816 ADAM15Q13444 863 aa6.43□□□□□ -1.38
CCDC38-204ENST00000546816 TRIM61Q5EBN2 209 aa6.43□□□□□ -1.38
CCDC38-204ENST00000546816 ANKRD35Q8N283 1001 aa6.43□□□□□ -1.38
CCDC38-204ENST00000546816 HIPK4Q8NE63 616 aa6.43□□□□□ -1.38
CCDC38-204ENST00000546816 PMFBP1Q8TBY8 1022 aa6.43□□□□□ -1.38
CCDC38-204ENST00000546816 LPPQ93052 612 aa6.43□□□□□ -1.38
CCDC38-204ENST00000546816 SCLYQ96I15 445 aa6.43□□□□□ -1.38
CCDC38-204ENST00000546816 GPRC5BQ9NZH0 403 aa6.43□□□□□ -1.38
CCDC38-204ENST00000546816 NDOR1Q9UHB4 597 aa6.43□□□□□ -1.38
CCDC38-204ENST00000546816 FOXN1O15353 648 aa6.42□□□□□ -1.38
CCDC38-204ENST00000546816 RAMP2O60895 175 aa6.42□□□□□ -1.38
CCDC38-204ENST00000546816 EFCAB14O75071 495 aa6.42□□□□□ -1.38
CCDC38-204ENST00000546816 RASGRP1O95267 797 aa6.42□□□□□ -1.38
CCDC38-204ENST00000546816 KCNA6P17658 529 aa6.42□□□□□ -1.38
CCDC38-204ENST00000546816 STAT3P40763 770 aa6.42□□□□□ -1.38
CCDC38-204ENST00000546816 ADAM8P78325 824 aa6.42□□□□□ -1.38
CCDC38-204ENST00000546816 ATP2C1P98194 919 aaPredicted RBP6.42□□□□□ -1.38
CCDC38-204ENST00000546816 CATSPEREQ5SY80 951 aa6.42□□□□□ -1.38
CCDC38-204ENST00000546816 SOGA3Q5TF21 947 aa6.42□□□□□ -1.38
CCDC38-204ENST00000546816 Q6ZRM9 215 aa6.42□□□□□ -1.38
CCDC38-204ENST00000546816 LILRB2Q8N423 598 aa6.42□□□□□ -1.38
CCDC38-204ENST00000546816 CALML6Q8TD86 181 aa6.42□□□□□ -1.38
CCDC38-204ENST00000546816 CELF4Q9BZC1 486 aaKnown RBP6.42□□□□□ -1.38
CCDC38-204ENST00000546816 A0A1W2PRX2 142 aa6.41□□□□□ -1.38
CCDC38-204ENST00000546816 PPFIA2O75334 1257 aa6.41□□□□□ -1.38
CCDC38-204ENST00000546816 KLHDC10Q6PID8 442 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms