RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ERCC6LQ2NKX8 1250 aa13.14□□□□□ -0.31
CCDC38-202ENST00000546386 MCTP2Q6DN12 878 aa13.14□□□□□ -0.31
CCDC38-202ENST00000546386 CDR2LQ86X02 465 aaPredicted RBP13.14□□□□□ -0.31
CCDC38-202ENST00000546386 TTYH3Q9C0H2 523 aa13.14□□□□□ -0.31
CCDC38-202ENST00000546386 KIAA1217Q5T5P2 1943 aa13.14□□□□□ -0.31
CCDC38-202ENST00000546386 DOCK1Q14185 1865 aa13.14□□□□□ -0.31
CCDC38-202ENST00000546386 EXOC3O60645 756 aa13.14□□□□□ -0.31
CCDC38-202ENST00000546386 NOL4O94818 638 aa13.14□□□□□ -0.31
CCDC38-202ENST00000546386 CALCAP01258 141 aa13.14□□□□□ -0.31
CCDC38-202ENST00000546386 HARSP12081 509 aaKnown RBP13.14□□□□□ -0.31
CCDC38-202ENST00000546386 EIF4A3P38919 411 aaKnown RBP13.14□□□□□ -0.31
CCDC38-202ENST00000546386 IRX5P78411 483 aaPredicted RBP13.14□□□□□ -0.31
CCDC38-202ENST00000546386 MRPS25P82663 173 aaKnown RBP13.14□□□□□ -0.31
CCDC38-202ENST00000546386 ELF2Q15723 593 aa13.14□□□□□ -0.31
CCDC38-202ENST00000546386 HSDL1Q3SXM5 330 aa13.14□□□□□ -0.31
CCDC38-202ENST00000546386 CYP26C1Q6V0L0 522 aa13.14□□□□□ -0.31
CCDC38-202ENST00000546386 ERO1BQ86YB8 467 aa13.14□□□□□ -0.31
CCDC38-202ENST00000546386 SLC35F6Q8N357 371 aa13.14□□□□□ -0.31
CCDC38-202ENST00000546386 CARD6Q9BX69 1037 aa13.14□□□□□ -0.31
CCDC38-202ENST00000546386 ACP6Q9NPH0 428 aa13.14□□□□□ -0.31
CCDC38-202ENST00000546386 NMRK2Q9NPI5 230 aa13.14□□□□□ -0.31
CCDC38-202ENST00000546386 PCDHA10Q9Y5I2 948 aa13.14□□□□□ -0.31
CCDC38-202ENST00000546386 RLFQ13129 1914 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 WDR64B1ANS9 1081 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 ZSCAN12O43309 604 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 MCM3APO60318 1980 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 CLSTN1O94985 981 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 CBWD6Q4V339 395 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 CBWD3Q5JTY5 395 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 CBWD5Q5RIA9 395 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 EPM2AIP1Q7L775 607 aaPredicted RBP13.13□□□□□ -0.31
CCDC38-202ENST00000546386 TMEM130Q8N3G9 435 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 DEF6Q9H4E7 631 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 SUGCTQ9HAC7 445 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 SLC9A2Q9UBY0 812 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 CHORDC1Q9UHD1 332 aaPredicted RBP13.13□□□□□ -0.31
CCDC38-202ENST00000546386 ADGRA3Q8IWK6 1321 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 TMCO5BA8MYB1 307 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 ANKRD63C9JTQ0 380 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 XRCC5P13010 732 aaKnown RBP13.13□□□□□ -0.31
CCDC38-202ENST00000546386 ATP4AP20648 1035 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 PRKCEQ02156 737 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 SCARA3Q6AZY7 606 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 TRIM59Q8IWR1 403 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 NEK11Q8NG66 645 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 C12orf42Q96LP6 360 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 INPP4AQ96PE3 977 aaPredicted RBP13.13□□□□□ -0.31
CCDC38-202ENST00000546386 GOLPH3Q9H4A6 298 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 PLEKHA4Q9H4M7 779 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 TBC1D22BQ9NU19 505 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 FHOD1Q9Y613 1164 aa13.13□□□□□ -0.31
CCDC38-202ENST00000546386 PAPPA2Q9BXP8 1791 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 BUB1O43683 1085 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 TLR2O60603 784 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 CNMDO75829 334 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 CASQ1P31415 396 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 ALDH5A1P51649 535 aaPredicted RBP13.12□□□□□ -0.31
CCDC38-202ENST00000546386 STXBP2Q15833 593 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 HAUS6Q7Z4H7 955 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 KIAA1328Q86T90 577 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 SPOCK2Q92563 424 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 CCDC42Q96M95 316 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 MLXIPQ9HAP2 919 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 AGPAT3Q9NRZ7 376 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 TOPORSQ9NS56 1045 aaPredicted RBP13.12□□□□□ -0.31
CCDC38-202ENST00000546386 PHIPQ8WWQ0 1821 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 ITIH6Q6UXX5 1313 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 A0A0G2JLL6 359 aaPredicted RBP13.12□□□□□ -0.31
CCDC38-202ENST00000546386 CELF2O95319 508 aaKnown RBP13.12□□□□□ -0.31
CCDC38-202ENST00000546386 GCLMP48507 274 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 PSMC5P62195 406 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 IGBP1P78318 339 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 ARHGAP44Q17R89 818 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 CCDC122Q5T0U0 273 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 PRRT2Q7Z6L0 340 aaPredicted RBP13.12□□□□□ -0.31
CCDC38-202ENST00000546386 FAM186BQ8IYM0 893 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 LRRC71Q8N4P6 559 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 RBM46Q8TBY0 533 aaKnown RBP13.12□□□□□ -0.31
CCDC38-202ENST00000546386 CAPZA3Q96KX2 299 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 ADAMTS1Q9UHI8 967 aa13.12□□□□□ -0.31
CCDC38-202ENST00000546386 PFASO15067 1338 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 FRMPD4Q14CM0 1322 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 TTLL13PA6NNM8 815 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 AKR1B10O60218 316 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 GGPS1O95749 300 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 UBA1P22314 1058 aaKnown RBP13.11□□□□□ -0.31
CCDC38-202ENST00000546386 CXCR5P32302 372 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 PRIMPOLQ96LW4 560 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 DNAJC7Q99615 494 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 PACSIN1Q9BY11 444 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 GBP3Q9H0R5 595 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 MYH11P35749 1972 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 A0A1W2PQC6 194 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 SPDYE5A6NIY4 337 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 BCRP11274 1271 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 ARHGAP25P42331 645 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 NAP1L1P55209 391 aaKnown RBP13.11□□□□□ -0.31
CCDC38-202ENST00000546386 PPATQ06203 517 aa13.11□□□□□ -0.31
CCDC38-202ENST00000546386 NCBP1Q09161 790 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms