RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 PPP1R2P3Q6NXS1 205 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 TAOK1Q7L7X3 1001 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 PTF1AQ7RTS3 328 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 ERO1BQ86YB8 467 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 GRK7Q8WTQ7 553 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 CEP63Q96MT8 703 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 MRPL4Q9BYD3 311 aaKnown RBP12.79□□□□□ -0.36
CHERP-203ENST00000546361 PYCARDQ9ULZ3 195 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 GOLGA6CA6NDK9 693 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 SPDYE16A6NNV3 312 aaPredicted RBP12.79□□□□□ -0.36
CHERP-203ENST00000546361 HUS1O60921 280 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 GOLGA6DP0CG33 693 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 YWHABP31946 246 aaKnown RBP12.79□□□□□ -0.36
CHERP-203ENST00000546361 CASP7P55210 303 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 ERCC6LQ2NKX8 1250 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 SPDYE2Q495Y8 402 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 CCDC170Q8IYT3 715 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 CCNYQ8ND76 341 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 SAAL1Q96ER3 474 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 SLITRK6Q9H5Y7 841 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 GOLGA6AQ9NYA3 693 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 SLC12A6Q9UHW9 1150 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 PHLPP2Q6ZVD8 1323 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 SHPRHQ149N8 1683 aa12.79□□□□□ -0.36
CHERP-203ENST00000546361 DDTLA6NHG4 134 aaPredicted RBP12.78□□□□□ -0.36
CHERP-203ENST00000546361 FOXN1O15353 648 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 SERPING1P05155 500 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 RINT1Q6NUQ1 792 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 SCFD2Q8WU76 684 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 NGRNQ9NPE2 291 aaKnown RBP12.78□□□□□ -0.36
CHERP-203ENST00000546361 CRCPO75575 148 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 DGAT1O75907 488 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 CAPN12Q6ZSI9 719 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 NBPF11Q86T75 865 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 ERICH1Q86X53 443 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHERP-203ENST00000546361 SMC1BQ8NDV3 1235 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 ACRBPQ8NEB7 543 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 KRT12Q99456 494 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 MAP3K14Q99558 947 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 POLIQ9UNA4 740 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 STXBP3O00186 592 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 HIP1RO75146 1068 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 NDUFA10O95299 355 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 KIF11P52732 1056 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 MAP7D1Q3KQU3 841 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 NAALADL2Q58DX5 795 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 DENND2CQ68D51 928 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 CCDC110Q8TBZ0 833 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 RTFDC1Q9BY42 306 aaPredicted RBP12.78□□□□□ -0.36
CHERP-203ENST00000546361 TRIM9Q9C026 710 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 ZMYND12Q9H0C1 365 aa12.78□□□□□ -0.36
CHERP-203ENST00000546361 CPSF3Q9UKF6 684 aaKnown RBP12.78□□□□□ -0.36
CHERP-203ENST00000546361 PRR29P0C7W0 189 aa12.77□□□□□ -0.36
CHERP-203ENST00000546361 ARL4AP40617 200 aa12.77□□□□□ -0.36
CHERP-203ENST00000546361 ZNF699Q32M78 642 aa12.77□□□□□ -0.36
CHERP-203ENST00000546361 ZNF710Q8N1W2 664 aa12.77□□□□□ -0.36
CHERP-203ENST00000546361 BBS5Q8N3I7 341 aa12.77□□□□□ -0.36
CHERP-203ENST00000546361 NHEJ1Q9H9Q4 299 aaPredicted RBP12.77□□□□□ -0.36
CHERP-203ENST00000546361 ZNF18P17022 549 aa12.77□□□□□ -0.36
CHERP-203ENST00000546361 SMARCA1P28370 1054 aa12.77□□□□□ -0.36
CHERP-203ENST00000546361 PSMC4P43686 418 aa12.77□□□□□ -0.36
CHERP-203ENST00000546361 MTMR3Q13615 1198 aa12.77□□□□□ -0.36
CHERP-203ENST00000546361 SETDB1Q15047 1291 aa12.77□□□□□ -0.36
CHERP-203ENST00000546361 PDS5AQ29RF7 1337 aaKnown RBP12.77□□□□□ -0.36
CHERP-203ENST00000546361 BEST2Q8NFU1 509 aa12.77□□□□□ -0.36
CHERP-203ENST00000546361 SMARCAD1Q9H4L7 1026 aa12.77□□□□□ -0.36
CHERP-203ENST00000546361 TUFT1Q9NNX1 390 aa12.77□□□□□ -0.36
CHERP-203ENST00000546361 GINM1Q9NU53 330 aa12.77□□□□□ -0.36
CHERP-203ENST00000546361 FBXO2Q9UK22 296 aaPredicted RBP12.77□□□□□ -0.36
CHERP-203ENST00000546361 SOWAHDA6NJG2 315 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 IL1R1P14778 569 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 ANXA13P27216 316 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 NMT1P30419 496 aaKnown RBP12.77□□□□□ -0.37
CHERP-203ENST00000546361 HOXA10P31260 410 aaPredicted RBP12.77□□□□□ -0.37
CHERP-203ENST00000546361 VAMP7P51809 220 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 HHATQ5VTY9 493 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 MAP1SQ66K74 1059 aaPredicted RBP12.77□□□□□ -0.37
CHERP-203ENST00000546361 C4orf50Q6ZRC1 276 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 USP49Q70CQ1 688 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 RFX6Q8HWS3 928 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 TMEM35BQ8NCS4 154 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 CHST13Q8NET6 341 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 MYRIPQ8NFW9 859 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 MAD1L1Q9Y6D9 718 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 LRRD1A4D1F6 860 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 LGALS16A8MUM7 142 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 TBX3O15119 743 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 FDPSP14324 419 aaKnown RBP12.77□□□□□ -0.37
CHERP-203ENST00000546361 CDC25BP30305 580 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 EFNA5P52803 228 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 PPFIA1Q13136 1202 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 GNASQ5JWF2 1037 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 TMEM270Q6UE05 265 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 SCN4BQ8IWT1 228 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 UHMK1Q8TAS1 419 aaKnown RBP12.77□□□□□ -0.37
CHERP-203ENST00000546361 ATP2A3Q93084 1043 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 NUDT12Q9BQG2 462 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 CDC23Q9UJX2 597 aa12.77□□□□□ -0.37
CHERP-203ENST00000546361 AGO2Q9UKV8 859 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms