RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 RHBDL3P58872 404 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 MEA1Q16626 185 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 ALS2CLQ60I27 953 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 NLGN1Q8N2Q7 840 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 MMGT1Q8N4V1 131 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 GIMAP7Q8NHV1 300 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 POP1Q99575 1024 aaKnown RBP10.62□□□□□ -0.71
TRAF1-203ENST00000546084 C7orf25Q9BPX7 421 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 PI4K2AQ9BTU6 479 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 GEMIN8Q9NWZ8 242 aaKnown RBP10.62□□□□□ -0.71
TRAF1-203ENST00000546084 SERPINA10Q9UK55 444 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 PLAGL2Q9UPG8 496 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 PLAAQ9Y263 795 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 KDM3AQ9Y4C1 1321 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 PPP1R11O60927 126 aaPredicted RBP10.62□□□□□ -0.71
TRAF1-203ENST00000546084 ZBTB7AO95365 584 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 GLI1P08151 1106 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 ITGA4P13612 1032 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 MARK3P27448 753 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 SATB1Q01826 763 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 EN1Q05925 392 aaPredicted RBP10.62□□□□□ -0.71
TRAF1-203ENST00000546084 IFI16Q16666 785 aaKnown RBP10.62□□□□□ -0.71
TRAF1-203ENST00000546084 CCDC121Q6ZUS5 278 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 CDR2LQ86X02 465 aaPredicted RBP10.62□□□□□ -0.71
TRAF1-203ENST00000546084 POMGNT1Q8WZA1 660 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 FNBP1Q96RU3 617 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 GLIS2Q9BZE0 524 aaPredicted RBP10.62□□□□□ -0.71
TRAF1-203ENST00000546084 CUEDC2Q9H467 287 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 ZNF408Q9H9D4 720 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 LRRIQ4A6NIV6 560 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 FAM86B1E9PN63 330 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 HNRNPDLO14979 420 aaKnown RBP10.62□□□□□ -0.71
TRAF1-203ENST00000546084 TTI1O43156 1089 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 ACSL3O95573 720 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 KRT19P08727 400 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 FAM86B2P0C5J1 330 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 CCDC172P0C7W6 258 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 CYP11B2P19099 503 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 CD58P19256 250 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 POLD1P28340 1107 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 PDE6BP35913 854 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 ERFP50548 548 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 MYL7Q01449 175 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 LRRC63Q05C16 580 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 LRRC14Q15048 493 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 KNOP1Q1ED39 458 aaKnown RBP10.62□□□□□ -0.71
TRAF1-203ENST00000546084 CYP4F22Q6NT55 531 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 AADACL2Q6P093 401 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 C4orf32Q8N8J7 132 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 RNPC3Q96LT9 517 aaKnown RBP10.62□□□□□ -0.71
TRAF1-203ENST00000546084 PARVGQ9HBI0 331 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 AKAP3O75969 853 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 UCHL3P15374 230 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 CD19P15391 556 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 ATF7P17544 494 aaPredicted RBP10.61□□□□□ -0.71
TRAF1-203ENST00000546084 TM4SF1P30408 202 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 TTMPQ5BVD1 217 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 SLFN12Q8IYM2 578 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.61□□□□□ -0.71
TRAF1-203ENST00000546084 SCFD1Q8WVM8 642 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 CABS1Q96KC9 395 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 SYNCQ9H7C4 482 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 RIC8AQ9NPQ8 531 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 COL1A1P02452 1464 aaPredicted RBP10.61□□□□□ -0.71
TRAF1-203ENST00000546084 FRMD3A2A2Y4 597 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 EML1O00423 815 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 SHMT1P34896 483 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 GRM1Q13255 1194 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 ARHGEF16Q5VV41 709 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 CC2D2BQ6DHV5 1058 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 PRR12Q9ULL5 1215 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 A0A1W2PRG0 241 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 RAD51CO43502 376 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 MYL1P05976 194 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 DYNLT1P63172 113 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 IGBP1P78318 339 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 MKRN3Q13064 507 aaKnown RBP10.61□□□□□ -0.71
TRAF1-203ENST00000546084 MTERF2Q49AM1 385 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 COL23A1Q86Y22 540 aaPredicted RBP10.61□□□□□ -0.71
TRAF1-203ENST00000546084 LMBR1Q8WVP7 490 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 KAT2BQ92831 832 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 LXNQ9BS40 222 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 TRPC5Q9UL62 973 aaPredicted RBP10.61□□□□□ -0.71
TRAF1-203ENST00000546084 PCNTO95613 3336 aa10.61□□□□□ -0.71
TRAF1-203ENST00000546084 ARP10275 920 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 LSP1P33241 339 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 SCARA5Q6ZMJ2 495 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 SEPT14Q6ZU15 432 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 CCDC26Q8TAB7 109 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 HAS1Q92839 578 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 IPO5O00410 1097 aaKnown RBP10.6□□□□□ -0.71
TRAF1-203ENST00000546084 PEX10O60683 326 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 PSMC2P35998 433 aaKnown RBP10.6□□□□□ -0.71
TRAF1-203ENST00000546084 SPP2Q13103 211 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 MIIPQ5JXC2 388 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 SLC10A5Q5PT55 438 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 ZBTB33Q86T24 672 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 MDM1Q8TC05 714 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 CNKSR1Q969H4 720 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 CCDC17Q96LX7 622 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms