RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TCERG1LQ5VWI1 586 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 CHADLQ6NUI6 762 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 ADAT2Q7Z6V5 191 aaKnown RBP15.41■□□□□ 0.06
SRP54-202ENST00000546080 KIRREL3Q8IZU9 778 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 HAS1Q92839 578 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 CEP95Q96GE4 821 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 PRMT1Q99873 361 aaKnown RBP15.41■□□□□ 0.06
SRP54-202ENST00000546080 ADAM7Q9H2U9 754 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 NR2E1Q9Y466 385 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 AFF2P51816 1311 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 FAM187AA6NFU0 413 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 CYP11B2P19099 503 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 GALCP54803 685 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 PLTPP55058 493 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 DIXDC1Q155Q3 683 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 UBE2SQ16763 222 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 NSMCE1Q8WV22 266 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 OSGEPQ9NPF4 335 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 RASAL2Q9UJF2 1139 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 LOC102724428A0A0B4J2F2 783 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 POTEB3A0JP26 581 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 POTECB2RU33 542 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 DDX3YO15523 660 aaKnown RBP15.4■□□□□ 0.06
SRP54-202ENST00000546080 AGTP01019 485 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 COPB2P35606 906 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 SIK1P57059 783 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 JAM2P57087 298 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 KLRC3Q07444 240 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 ADCY2Q08462 1091 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 ITPK1Q13572 414 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 DHX34Q14147 1143 aaKnown RBP15.4■□□□□ 0.06
SRP54-202ENST00000546080 PPP2R5AQ15172 486 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 EPHA7Q15375 998 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 C6orf118Q5T5N4 469 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 POTEBQ6S5H4 581 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 C16orf86Q6ZW13 317 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 CROCCP2Q86T23 111 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 TXNRD3Q86VQ6 643 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 MAB21L3Q8N8X9 362 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 TBC1D22AQ8WUA7 517 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 RNF25Q96BH1 459 aaPredicted RBP15.4■□□□□ 0.06
SRP54-202ENST00000546080 CCDC134Q9H6E4 229 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 AJAP1Q9UKB5 411 aaPredicted RBP15.4■□□□□ 0.06
SRP54-202ENST00000546080 C15orf41Q9Y2V0 281 aa15.4■□□□□ 0.06
SRP54-202ENST00000546080 CALUO43852 315 aaPredicted RBP15.39■□□□□ 0.05
SRP54-202ENST00000546080 RTN2O75298 545 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 FERP16591 822 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 IFI35P80217 286 aaPredicted RBP15.39■□□□□ 0.05
SRP54-202ENST00000546080 KIAA1755Q5JYT7 1200 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 DCAF12L1Q5VU92 463 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 COL23A1Q86Y22 540 aaPredicted RBP15.39■□□□□ 0.05
SRP54-202ENST00000546080 RFFLQ8WZ73 363 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 THOC1Q96FV9 657 aaKnown RBP15.39■□□□□ 0.05
SRP54-202ENST00000546080 CARD9Q9H257 536 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 BATF3Q9NR55 127 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 ABCF3Q9NUQ8 709 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 GCNT4Q9P109 453 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 TRPC6Q9Y210 931 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 TRAF3IP3Q9Y228 551 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 SNX24Q9Y343 169 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 NCANO14594 1321 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 GFPT2O94808 682 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 ANP32DO95626 131 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 IFNAR2P48551 515 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 CASP5P51878 434 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 SLC29A2Q14542 456 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 JAMLQ86YT9 394 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 LNX1Q8TBB1 728 aaPredicted RBP15.39■□□□□ 0.05
SRP54-202ENST00000546080 SLC35G2Q8TBE7 412 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 WDR66Q8TBY9 1149 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 FBXO25Q8TCJ0 367 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 GLG1Q92896 1179 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 STMN4Q9H169 189 aaPredicted RBP15.39■□□□□ 0.05
SRP54-202ENST00000546080 ERVK-5Q9HDB9 667 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 SIX2Q9NPC8 291 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 PPP1R9AQ9ULJ8 1098 aa15.39■□□□□ 0.05
SRP54-202ENST00000546080 PITPNM2Q9BZ72 1349 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 KRT13P13646 458 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 NQO1P15559 274 aaKnown RBP15.38■□□□□ 0.05
SRP54-202ENST00000546080 STAT1P42224 750 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 PPP4CP60510 307 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 SATB1Q01826 763 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 KNOP1Q1ED39 458 aaKnown RBP15.38■□□□□ 0.05
SRP54-202ENST00000546080 LRCH2Q5VUJ6 765 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 GJB7Q6PEY0 223 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 ZDHHC24Q6UX98 284 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 CLEC4GQ6UXB4 293 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 BICDL1Q6ZP65 573 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 CTNNBL1Q8WYA6 563 aaPredicted RBP15.38■□□□□ 0.05
SRP54-202ENST00000546080 CCDC113Q9H0I3 377 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 NOP53Q9NZM5 478 aaKnown RBP15.38■□□□□ 0.05
SRP54-202ENST00000546080 AGAP1Q9UPQ3 857 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 L3MBTL1Q9Y468 752 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 KIAA0391O15091 583 aaKnown RBP15.38■□□□□ 0.05
SRP54-202ENST00000546080 TMEM253P0C7T8 217 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 LMNB1P20700 586 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 MAPK7Q13164 816 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 ZNF268Q14587 947 aaPredicted RBP15.38■□□□□ 0.05
SRP54-202ENST00000546080 CLUL1Q15846 466 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 ASPRV1Q53RT3 343 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms