RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 SCN5AQ14524 2016 aa11.98□□□□□ -0.49
PAAF1-216ENST00000546039 LTBP2Q14767 1821 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 USO1O60763 962 aaKnown RBP11.97□□□□□ -0.49
PAAF1-216ENST00000546039 KINO60870 393 aaKnown RBP11.97□□□□□ -0.49
PAAF1-216ENST00000546039 MAFO75444 373 aaPredicted RBP11.97□□□□□ -0.49
PAAF1-216ENST00000546039 ZNF202O95125 648 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 MBD3O95983 291 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 LIG1P18858 919 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 ATN1P54259 1190 aaPredicted RBP11.97□□□□□ -0.49
PAAF1-216ENST00000546039 AMPD3Q01432 767 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 SNW1Q13573 536 aaKnown RBP11.97□□□□□ -0.49
PAAF1-216ENST00000546039 EMC2Q15006 297 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 PTGISQ16647 500 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 MARCH8Q5T0T0 291 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 RINT1Q6NUQ1 792 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 KANK3Q6NY19 840 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 TAF2Q6P1X5 1199 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 MTHFD1LQ6UB35 978 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 GPBP1Q86WP2 473 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 ENGASEQ8NFI3 743 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 PPP1R13LQ8WUF5 828 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 TCP11Q8WWU5 503 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 TIGD1Q96MW7 591 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 MTRQ99707 1265 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 SH2D3AQ9BRG2 576 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 KBTBD4Q9NVX7 518 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 SERTAD1Q9UHV2 236 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 NOD1Q9Y239 953 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 PCDHA2Q9Y5H9 948 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 DNAH12Q6ZR08 3092 aa11.97□□□□□ -0.49
PAAF1-216ENST00000546039 IGKV6-21A0A0C4DH24 114 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 SMIM35A0A1B0GVV1 85 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 DCDC2CA8MYV0 355 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 TREHO43280 583 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 NR1I2O75469 434 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 CYP2C9P11712 490 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 CYP11B2P19099 503 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 GUCY2CP25092 1073 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 KLRC1P26715 233 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 TMOD1P28289 359 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 RTP1P59025 263 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 PTK7Q13308 1070 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 HIC1Q14526 733 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 DHX8Q14562 1220 aaKnown RBP11.96□□□□□ -0.49
PAAF1-216ENST00000546039 TRIM60Q495X7 471 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 LONRF3Q496Y0 759 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 KRBA2Q6ZNG9 492 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 C1orf186Q6ZWK4 172 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 ANKRD33Q7Z3H0 272 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 SERINC5Q86VE9 423 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 FAM126BQ8IXS8 530 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 LINC01465Q8N7H1 131 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 CNNM3Q8NE01 707 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 TOX2Q96NM4 488 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 MAP7D2Q96T17 732 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 RUSC1Q9BVN2 902 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 PDLIM7Q9NR12 457 aa11.96□□□□□ -0.49
PAAF1-216ENST00000546039 B4GALT4O60513 344 aa11.95□□□□□ -0.5
PAAF1-216ENST00000546039 PQBP1O60828 265 aaKnown RBP11.95□□□□□ -0.5
PAAF1-216ENST00000546039 CD4P01730 458 aa11.95□□□□□ -0.5
PAAF1-216ENST00000546039 KRT18P05783 430 aaKnown RBP11.95□□□□□ -0.5
PAAF1-216ENST00000546039 MYL1P05976 194 aa11.95□□□□□ -0.5
PAAF1-216ENST00000546039 DNM2P50570 870 aa11.95□□□□□ -0.5
PAAF1-216ENST00000546039 ZNF200P98182 395 aaPredicted RBP11.95□□□□□ -0.5
PAAF1-216ENST00000546039 LRRC26Q2I0M4 334 aa11.95□□□□□ -0.5
PAAF1-216ENST00000546039 EFCAB12Q6NXP0 572 aa11.95□□□□□ -0.5
PAAF1-216ENST00000546039 RSPH3Q86UC2 560 aa11.95□□□□□ -0.5
PAAF1-216ENST00000546039 CCDC155Q8N6L0 562 aa11.95□□□□□ -0.5
PAAF1-216ENST00000546039 METTL13Q8N6R0 699 aa11.95□□□□□ -0.5
PAAF1-216ENST00000546039 KIFAP3Q92845 792 aa11.95□□□□□ -0.5
PAAF1-216ENST00000546039 DRC1Q96MC2 740 aa11.95□□□□□ -0.5
PAAF1-216ENST00000546039 HTATIP2Q9BUP3 242 aa11.95□□□□□ -0.5
PAAF1-216ENST00000546039 XPNPEP1Q9NQW7 623 aa11.95□□□□□ -0.5
PAAF1-216ENST00000546039 BMP2KQ9NSY1 1161 aaPredicted RBP11.95□□□□□ -0.5
PAAF1-216ENST00000546039 TRMT13Q9NUP7 481 aaKnown RBP11.95□□□□□ -0.5
PAAF1-216ENST00000546039 DACT1Q9NYF0 836 aa11.95□□□□□ -0.5
PAAF1-216ENST00000546039 HOOK1Q9UJC3 728 aaKnown RBP11.95□□□□□ -0.5
PAAF1-216ENST00000546039 ODF2LQ9ULJ1 636 aa11.95□□□□□ -0.5
PAAF1-216ENST00000546039 ATP11BQ9Y2G3 1177 aa11.95□□□□□ -0.5
PAAF1-216ENST00000546039 MYMKA6NI61 221 aa11.94□□□□□ -0.5
PAAF1-216ENST00000546039 GTPBP6O43824 516 aaPredicted RBP11.94□□□□□ -0.5
PAAF1-216ENST00000546039 CAND2O75155 1236 aa11.94□□□□□ -0.5
PAAF1-216ENST00000546039 CLCN3P51790 818 aa11.94□□□□□ -0.5
PAAF1-216ENST00000546039 TLE2Q04725 743 aa11.94□□□□□ -0.5
PAAF1-216ENST00000546039 RBL2Q08999 1139 aa11.94□□□□□ -0.5
PAAF1-216ENST00000546039 ARSHQ5FYA8 562 aa11.94□□□□□ -0.5
PAAF1-216ENST00000546039 IER5Q5VY09 327 aa11.94□□□□□ -0.5
PAAF1-216ENST00000546039 CNNM4Q6P4Q7 775 aa11.94□□□□□ -0.5
PAAF1-216ENST00000546039 RUFY4Q6ZNE9 571 aa11.94□□□□□ -0.5
PAAF1-216ENST00000546039 SH3RF1Q7Z6J0 888 aa11.94□□□□□ -0.5
PAAF1-216ENST00000546039 RPAINQ86UA6 219 aa11.94□□□□□ -0.5
PAAF1-216ENST00000546039 ELOA2Q8IYF1 753 aaPredicted RBP11.94□□□□□ -0.5
PAAF1-216ENST00000546039 ZNF710Q8N1W2 664 aa11.94□□□□□ -0.5
PAAF1-216ENST00000546039 LRRC71Q8N4P6 559 aa11.94□□□□□ -0.5
PAAF1-216ENST00000546039 CAGE1Q8TC20 777 aa11.94□□□□□ -0.5
PAAF1-216ENST00000546039 PSPC1Q8WXF1 523 aaKnown RBP11.94□□□□□ -0.5
PAAF1-216ENST00000546039 DDX12PQ92771 950 aa11.94□□□□□ -0.5
PAAF1-216ENST00000546039 CTAGE1Q96RT6 745 aa11.94□□□□□ -0.5
PAAF1-216ENST00000546039 C7orf25Q9BPX7 421 aa11.94□□□□□ -0.5
PAAF1-216ENST00000546039 REEP2Q9BRK0 252 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms