RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 H2AFZP0C0S5 128 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 HOXA13P31271 388 aaPredicted RBP16.66■□□□□ 0.26
CNN3-207ENST00000545882 LSP1P33241 339 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 JAG1P78504 1218 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 CUL1Q13616 776 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 MCTP2Q6DN12 878 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 RINT1Q6NUQ1 792 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 H2AFVQ71UI9 128 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 NT5DC3Q86UY8 548 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 ZDHHC15Q96MV8 337 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 SUCLA2Q9P2R7 463 aaPredicted RBP16.66■□□□□ 0.26
CNN3-207ENST00000545882 PCDHB13Q9Y5F0 798 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 SPDYE3A6NKU9 549 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 PLSCR1O15162 318 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 FOSP01100 380 aaPredicted RBP16.66■□□□□ 0.26
CNN3-207ENST00000545882 RPL13P26373 211 aaKnown RBP16.66■□□□□ 0.26
CNN3-207ENST00000545882 FLT3P36888 993 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 HLTFQ14527 1009 aaKnown RBP eCLIP16.66■□□□□ 0.26
CNN3-207ENST00000545882 CEP85LQ5SZL2 805 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 LRIG3Q6UXM1 1119 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 U2AF1L4Q8WU68 220 aaKnown RBP16.66■□□□□ 0.26
CNN3-207ENST00000545882 EFCC1Q9HA90 598 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 OLFML3Q9NRN5 406 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 INTUQ9ULD6 942 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 RABGAP1Q9Y3P9 1069 aa16.66■□□□□ 0.26
CNN3-207ENST00000545882 IGLV3-22A0A075B6J6 115 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 HMGB1P1B2RPK0 211 aaPredicted RBP16.65■□□□□ 0.26
CNN3-207ENST00000545882 NDUFAB1O14561 156 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 ZEB2O60315 1214 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 GFPT2O94808 682 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 NDUFB10O96000 172 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 CYP3A4P08684 503 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 NMT1P30419 496 aaKnown RBP16.65■□□□□ 0.26
CNN3-207ENST00000545882 PDE6BP35913 854 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 GALCP54803 685 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 NPEPPSP55786 919 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 ICA1Q05084 483 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 SYDE2Q5VT97 1194 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 PEX26Q7Z412 305 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 GMCL1P1Q8NEA9 526 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 OR2W6PQ8NHA6 318 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 KAT2BQ92831 832 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 MASTLQ96GX5 879 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 HES6Q96HZ4 224 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 SYT11Q9BT88 431 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 EPN3Q9H201 632 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 PI4KBQ9UBF8 816 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 STK24Q9Y6E0 443 aa16.65■□□□□ 0.26
CNN3-207ENST00000545882 TMCO5BA8MYB1 307 aa16.64■□□□□ 0.26
CNN3-207ENST00000545882 ZBTB39O15060 712 aa16.64■□□□□ 0.26
CNN3-207ENST00000545882 GDF11O95390 407 aa16.64■□□□□ 0.26
CNN3-207ENST00000545882 FERP16591 822 aa16.64■□□□□ 0.26
CNN3-207ENST00000545882 MDH1P40925 334 aaKnown RBP16.64■□□□□ 0.26
CNN3-207ENST00000545882 LIG3P49916 1009 aa16.64■□□□□ 0.26
CNN3-207ENST00000545882 CTTNQ14247 550 aaKnown RBP16.64■□□□□ 0.26
CNN3-207ENST00000545882 COG2Q14746 738 aa16.64■□□□□ 0.26
CNN3-207ENST00000545882 PTGISQ16647 500 aa16.64■□□□□ 0.26
CNN3-207ENST00000545882 ZC2HC1CQ53FD0 456 aaPredicted RBP16.64■□□□□ 0.26
CNN3-207ENST00000545882 MAATS1Q7Z4T9 603 aa16.64■□□□□ 0.26
CNN3-207ENST00000545882 MICALL1Q8N3F8 863 aa16.64■□□□□ 0.26
CNN3-207ENST00000545882 PIGOQ8TEQ8 1089 aa16.64■□□□□ 0.26
CNN3-207ENST00000545882 GMCL1Q96IK5 515 aa16.64■□□□□ 0.26
CNN3-207ENST00000545882 FIZ1Q96SL8 496 aa16.64■□□□□ 0.26
CNN3-207ENST00000545882 HSD17B14Q9BPX1 270 aa16.64■□□□□ 0.26
CNN3-207ENST00000545882 IDI2Q9BXS1 227 aa16.64■□□□□ 0.26
CNN3-207ENST00000545882 CCDC188H7C350 402 aa16.64■□□□□ 0.25
CNN3-207ENST00000545882 KRIT1O00522 736 aa16.64■□□□□ 0.25
CNN3-207ENST00000545882 EVI5O60447 810 aa16.64■□□□□ 0.25
CNN3-207ENST00000545882 TBCAO75347 108 aaKnown RBP16.64■□□□□ 0.25
CNN3-207ENST00000545882 PPP1R37O75864 691 aa16.64■□□□□ 0.25
CNN3-207ENST00000545882 GAP43P17677 238 aa16.64■□□□□ 0.25
CNN3-207ENST00000545882 POU5F1Q01860 360 aaKnown RBP16.64■□□□□ 0.25
CNN3-207ENST00000545882 SLC15A2Q16348 729 aa16.64■□□□□ 0.25
CNN3-207ENST00000545882 NFIL3Q16649 462 aa16.64■□□□□ 0.25
CNN3-207ENST00000545882 C1orf186Q6ZWK4 172 aa16.64■□□□□ 0.25
CNN3-207ENST00000545882 KSR1Q8IVT5 923 aa16.64■□□□□ 0.25
CNN3-207ENST00000545882 PAGR1Q9BTK6 254 aa16.64■□□□□ 0.25
CNN3-207ENST00000545882 WDR18Q9BV38 432 aa16.64■□□□□ 0.25
CNN3-207ENST00000545882 GPR88Q9GZN0 384 aa16.64■□□□□ 0.25
CNN3-207ENST00000545882 OSGEPQ9NPF4 335 aa16.64■□□□□ 0.25
CNN3-207ENST00000545882 AMACRQ9UHK6 382 aa16.64■□□□□ 0.25
CNN3-207ENST00000545882 NCANO14594 1321 aa16.63■□□□□ 0.25
CNN3-207ENST00000545882 IGSF9BQ9UPX0 1349 aa16.63■□□□□ 0.25
CNN3-207ENST00000545882 EIF3DO15371 548 aaKnown RBP eCLIP16.63■□□□□ 0.25
CNN3-207ENST00000545882 SLITRK3O94933 977 aa16.63■□□□□ 0.25
CNN3-207ENST00000545882 MMP10P09238 476 aa16.63■□□□□ 0.25
CNN3-207ENST00000545882 SOX5P35711 763 aa16.63■□□□□ 0.25
CNN3-207ENST00000545882 STAT1P42224 750 aa16.63■□□□□ 0.25
CNN3-207ENST00000545882 SEC24CP53992 1094 aa16.63■□□□□ 0.25
CNN3-207ENST00000545882 PPATQ06203 517 aa16.63■□□□□ 0.25
CNN3-207ENST00000545882 ZNF844Q08AG5 666 aa16.63■□□□□ 0.25
CNN3-207ENST00000545882 RRP1BQ14684 758 aaKnown RBP16.63■□□□□ 0.25
CNN3-207ENST00000545882 NAA35Q5VZE5 725 aa16.63■□□□□ 0.25
CNN3-207ENST00000545882 BTNL9Q6UXG8 535 aa16.63■□□□□ 0.25
CNN3-207ENST00000545882 TMEM179Q6ZVK1 233 aa16.63■□□□□ 0.25
CNN3-207ENST00000545882 PODNQ7Z5L7 613 aa16.63■□□□□ 0.25
CNN3-207ENST00000545882 DAAM2Q86T65 1068 aa16.63■□□□□ 0.25
CNN3-207ENST00000545882 KIAA0825Q8IV33 1275 aa16.63■□□□□ 0.25
CNN3-207ENST00000545882 FAM186BQ8IYM0 893 aa16.63■□□□□ 0.25
CNN3-207ENST00000545882 LMBR1Q8WVP7 490 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms