RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 HSPA6P17066 643 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 HSPA9P38646 679 aaKnown RBP14.2□□□□□ -0.14
CPSF7-223ENST00000544669 IRAK1P51617 712 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 CDR1P51861 262 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 PSMC6P62333 389 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 SLC7A5Q01650 507 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 CEP55Q53EZ4 464 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 DPY19L2P1Q6NXN4 242 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 MICALCLQ6ZW33 695 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 NIPA1Q7RTP0 329 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 FAM178BQ8IXR5 827 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 EFCAB13Q8IY85 973 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 RASGEF1CQ8N431 466 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 LRRC57Q8N9N7 239 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 CTNNBL1Q8WYA6 563 aaPredicted RBP14.2□□□□□ -0.14
CPSF7-223ENST00000544669 BORCS6Q96GS4 357 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 PSMB7Q99436 277 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 TEKT3Q9BXF9 490 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 FGFBP2Q9BYJ0 223 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 DBNDD1Q9H9R9 158 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.2□□□□□ -0.148e-6■■□□□ 11.4
CPSF7-223ENST00000544669 FAM114A2Q9NRY5 505 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 NENFQ9UMX5 172 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 MYH7BA7E2Y1 1941 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 GOLGA6L10A0A0M3HER8 536 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 MAPK13O15264 365 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 EIF3HO15372 352 aaKnown RBP eCLIP14.2□□□□□ -0.14
CPSF7-223ENST00000544669 SLITRK3O94933 977 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 ERCC3P19447 782 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 MAGEA9P43362 315 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 CASP5P51878 434 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 FKBP1CQ5VVH2 108 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 SH3BP5LQ7L8J4 393 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 ZNF720Q7Z2F6 126 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 CROCCP2Q86T23 111 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 TPH2Q8IWU9 490 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 RHOT2Q8IXI1 618 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 MORC4Q8TE76 937 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 PPM1EQ8WY54 764 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 IFT81Q8WYA0 676 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 RFFLQ8WZ73 363 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 CSRNP1Q96S65 589 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 QTRT2Q9H974 415 aaKnown RBP14.2□□□□□ -0.14
CPSF7-223ENST00000544669 LARSQ9P2J5 1176 aaKnown RBP14.2□□□□□ -0.14
CPSF7-223ENST00000544669 RSPH14Q9UHP6 348 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 FEM1BQ9UK73 627 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 PFASO15067 1338 aa14.19□□□□□ -0.14
CPSF7-223ENST00000544669 TMCO5BA8MYB1 307 aa14.19□□□□□ -0.14
CPSF7-223ENST00000544669 CEP104O60308 925 aa14.19□□□□□ -0.14
CPSF7-223ENST00000544669 GLI1P08151 1106 aa14.19□□□□□ -0.14
CPSF7-223ENST00000544669 VIL1P09327 827 aaKnown RBP14.19□□□□□ -0.14
CPSF7-223ENST00000544669 HOXD13P35453 343 aa14.19□□□□□ -0.14
CPSF7-223ENST00000544669 FMO5P49326 533 aa14.19□□□□□ -0.14
CPSF7-223ENST00000544669 BIRC3Q13489 604 aa14.19□□□□□ -0.14
CPSF7-223ENST00000544669 TCEAL1Q15170 157 aa14.19□□□□□ -0.14
CPSF7-223ENST00000544669 EZH2Q15910 746 aaKnown RBP14.19□□□□□ -0.14
CPSF7-223ENST00000544669 KDM7AQ6ZMT4 941 aa14.19□□□□□ -0.14
CPSF7-223ENST00000544669 INTS8Q75QN2 995 aaKnown RBP14.19□□□□□ -0.14
CPSF7-223ENST00000544669 AKT1S1Q96B36 256 aa14.19□□□□□ -0.14
CPSF7-223ENST00000544669 MS4A14Q96JA4 679 aa14.19□□□□□ -0.14
CPSF7-223ENST00000544669 GDAP1L1Q96MZ0 367 aa14.19□□□□□ -0.14
CPSF7-223ENST00000544669 RUSC1Q9BVN2 902 aa14.19□□□□□ -0.14
CPSF7-223ENST00000544669 RAB17Q9H0T7 212 aa14.19□□□□□ -0.14
CPSF7-223ENST00000544669 RANBP17Q9H2T7 1088 aaKnown RBP14.19□□□□□ -0.14
CPSF7-223ENST00000544669 DMAC2Q9NW81 257 aa14.19□□□□□ -0.14
CPSF7-223ENST00000544669 NFU1Q9UMS0 254 aa14.19□□□□□ -0.14
CPSF7-223ENST00000544669 ATXN2Q99700 1313 aaKnown RBP14.18□□□□□ -0.14
CPSF7-223ENST00000544669 TGFB1I1O43294 461 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 TBC1D12O60347 775 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 MMP10P09238 476 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 HADHBP55084 474 aaKnown RBP14.18□□□□□ -0.14
CPSF7-223ENST00000544669 IRX5P78411 483 aaPredicted RBP14.18□□□□□ -0.14
CPSF7-223ENST00000544669 CYP4A11Q02928 519 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 MCF2L2Q86YR7 1114 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 C12orf56Q8IXR9 622 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 GSPT2Q8IYD1 628 aaKnown RBP14.18□□□□□ -0.14
CPSF7-223ENST00000544669 C3orf20Q8ND61 904 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 FAM151AQ8WW52 585 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 CCDC43Q96MW1 224 aaKnown RBP14.18□□□□□ -0.14
CPSF7-223ENST00000544669 RUNDC3BQ96NL0 473 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 SIX2Q9NPC8 291 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 UTP11Q9Y3A2 253 aaKnown RBP14.18□□□□□ -0.14
CPSF7-223ENST00000544669 NCANO14594 1321 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 ARHGEF35A5YM69 484 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 MIF4GDA9UHW6 222 aaKnown RBP14.18□□□□□ -0.14
CPSF7-223ENST00000544669 KRIT1O00522 736 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 PMM2O15305 246 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 GDF11O95390 407 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 CFBP00751 764 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 ACTN1P12814 892 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 TNFAIP3P21580 790 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 CARSP49589 748 aaKnown RBP14.18□□□□□ -0.14
CPSF7-223ENST00000544669 CORO7P57737 925 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 DAAM2Q86T65 1068 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 COL23A1Q86Y22 540 aaPredicted RBP14.18□□□□□ -0.14
CPSF7-223ENST00000544669 SLC30A5Q8TAD4 765 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 HES6Q96HZ4 224 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 ZIM3Q96PE6 472 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 ZNF577Q9BSK1 485 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 CARD9Q9H257 536 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms