RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 HSD17B14Q9BPX1 270 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 EPB41P11171 864 aaKnown RBP17.24■□□□□ 0.35
SNRNP70-203ENST00000544278 COBLL1Q53SF7 1204 aa17.24■□□□□ 0.35
SNRNP70-203ENST00000544278 CEP63Q96MT8 703 aa17.24■□□□□ 0.35
SNRNP70-203ENST00000544278 TSGA10Q9BZW7 698 aa17.24■□□□□ 0.35
SNRNP70-203ENST00000544278 TMX2Q9Y320 296 aa17.24■□□□□ 0.35
SNRNP70-203ENST00000544278 GJA3Q9Y6H8 435 aa17.24■□□□□ 0.35
SNRNP70-203ENST00000544278 CNTNAP1P78357 1384 aa17.24■□□□□ 0.35
SNRNP70-203ENST00000544278 HIP1RO75146 1068 aa17.24■□□□□ 0.35
SNRNP70-203ENST00000544278 EYA4O95677 639 aa17.24■□□□□ 0.35
SNRNP70-203ENST00000544278 MBOAT7Q96N66 472 aa17.24■□□□□ 0.35
SNRNP70-203ENST00000544278 EXOC3O60645 756 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 EIF3JO75822 258 aaKnown RBP17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 PSMD10O75832 226 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 CXCL9Q07325 125 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 RASA3Q14644 834 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 STYK1Q6J9G0 422 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 AADACL2Q6P093 401 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 TTLL6Q8N841 843 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 HNRNPLLQ8WVV9 542 aaKnown RBP17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 FOCADQ5VW36 1801 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 K7ENM7 598 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 WNT10BO00744 389 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 ATP9AO75110 1047 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 ENTPD3O75355 529 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 CLSTN1O94985 981 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 CYP3A4P08684 503 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 ITGA4P13612 1032 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 GCLMP48507 274 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 ZNF211Q13398 564 aaPredicted RBP17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 CPNE8Q86YQ8 564 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 CCDC127Q96BQ5 260 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 FAM20AQ96MK3 541 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 CBWD1Q9BRT8 395 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 ZMYM2Q9UBW7 1377 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 TESPA1A2RU30 521 aaPredicted RBP17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 ARHGEF35A5YM69 484 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 HEXIM1O94992 359 aaKnown RBP17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 FOSP01100 380 aaPredicted RBP17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 KRT14P02533 472 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 CDK17Q00537 523 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 SF3A3Q12874 501 aaKnown RBP eCLIP17.23■□□□□ 0.357e-56■■■□□ 17.6
SNRNP70-203ENST00000544278 SPP2Q13103 211 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 GPS2Q13227 327 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 UGCGQ16739 394 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 C1orf186Q6ZWK4 172 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 TXLNBQ8N3L3 684 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 TAAR1Q96RJ0 339 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 DDX47Q9H0S4 455 aaKnown RBP17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 VCPKMTQ9H867 229 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 PARVGQ9HBI0 331 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 GOPCQ9HD26 462 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 KCNH7Q9NS40 1196 aa17.23■□□□□ 0.35
SNRNP70-203ENST00000544278 IGSF9BQ9UPX0 1349 aa17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 ANO9A1A5B4 782 aa17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 FRMD3A2A2Y4 597 aa17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 AGPSO00116 658 aa17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 ATMINO43313 823 aaPredicted RBP17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 CALUO43852 315 aaPredicted RBP17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 FLOT1O75955 427 aa17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 ATP1A2P50993 1020 aa17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 EPHA7Q15375 998 aa17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 POP1Q99575 1024 aaKnown RBP17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 TYW1Q9NV66 732 aaKnown RBP17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 COL4A5P29400 1685 aa17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 SSTR3P32745 418 aaPredicted RBP17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 PRELPP51888 382 aa17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 WDR93Q6P2C0 686 aa17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 ARL8AQ96BM9 186 aa17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 SIX2Q9NPC8 291 aa17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 LRRC37AA6NMS7 1700 aa17.22■□□□□ 0.35
SNRNP70-203ENST00000544278 DDX3XO00571 662 aaKnown RBP eCLIP17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 EVI5O60447 810 aa17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 RXRBP28702 533 aa17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 TUBB2AQ13885 445 aa17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 HLTFQ14527 1009 aaKnown RBP eCLIP17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 DRAP1Q14919 205 aaPredicted RBP17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 GBP6Q6ZN66 633 aa17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 EPM2AIP1Q7L775 607 aaPredicted RBP17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 DAW1Q8N136 415 aa17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 FAM151AQ8WW52 585 aa17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 SAAL1Q96ER3 474 aa17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 TUBB2BQ9BVA1 445 aa17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 STK32BQ9NY57 414 aa17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 NAGPAQ9UK23 515 aa17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 DNAJC12Q9UKB3 198 aa17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 RRP15Q9Y3B9 282 aaKnown RBP17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 MIER3Q7Z3K6 550 aa17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 OR2W6PQ8NHA6 318 aa17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 SLC20A1Q8WUM9 679 aa17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 CELF4Q9BZC1 486 aaKnown RBP17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 GBP3Q9H0R5 595 aa17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 NR2E1Q9Y466 385 aa17.21■□□□□ 0.35
SNRNP70-203ENST00000544278 SLC16A4O15374 487 aa17.21■□□□□ 0.34
SNRNP70-203ENST00000544278 ATP8B1O43520 1251 aa17.21■□□□□ 0.34
SNRNP70-203ENST00000544278 MYCNP04198 464 aaPredicted RBP17.21■□□□□ 0.34
SNRNP70-203ENST00000544278 CAP2P40123 477 aa17.21■□□□□ 0.34
SNRNP70-203ENST00000544278 ITGB3BPQ13352 177 aaPredicted RBP17.21■□□□□ 0.34
SNRNP70-203ENST00000544278 NAB2Q15742 525 aa17.21■□□□□ 0.34
SNRNP70-203ENST00000544278 DPY19L2P1Q6NXN4 242 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms