RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 PPP1R12CQ9BZL4 782 aa16.12■□□□□ 0.17
TNFRSF1A-216ENST00000543995 ATP6V0A4Q9HBG4 840 aa16.12■□□□□ 0.17
TNFRSF1A-216ENST00000543995 STK17AQ9UEE5 414 aa16.12■□□□□ 0.17
TNFRSF1A-216ENST00000543995 KCNH3Q9ULD8 1083 aa16.12■□□□□ 0.17
TNFRSF1A-216ENST00000543995 A0A087X0B3 334 aa16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 SMIM35A0A1B0GVV1 85 aa16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 A0A1W2PQ27 194 aa16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 A0A1W2PQ64 194 aa16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 A0A1W2PQD8 194 aa16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 DGAT1O75907 488 aa16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 PLA2G4BP0C869 781 aa16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 THPOP40225 353 aa16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 DNM2P50570 870 aa16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 CLCN3P51790 818 aa16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 BFSP2Q13515 415 aa16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 EMC2Q15006 297 aa16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 CAGE1Q8TC20 777 aa16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 RAD54LQ92698 747 aa16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 DHX58Q96C10 678 aa16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 MAP7D2Q96T17 732 aa16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 DHX33Q9H6R0 707 aaKnown RBP16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 PDLIM7Q9NR12 457 aa16.11■□□□□ 0.17
TNFRSF1A-216ENST00000543995 POLR2DO15514 142 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-216ENST00000543995 PFKFB1P16118 471 aa16.1■□□□□ 0.17
TNFRSF1A-216ENST00000543995 RGS19P49795 217 aa16.1■□□□□ 0.17
TNFRSF1A-216ENST00000543995 MCM6Q14566 821 aa16.1■□□□□ 0.17
TNFRSF1A-216ENST00000543995 CLEC17AQ6ZS10 378 aa16.1■□□□□ 0.17
TNFRSF1A-216ENST00000543995 MAEAQ7L5Y9 396 aa16.1■□□□□ 0.17
TNFRSF1A-216ENST00000543995 SH3RF1Q7Z6J0 888 aa16.1■□□□□ 0.17
TNFRSF1A-216ENST00000543995 SYT2Q8N9I0 419 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF1A-216ENST00000543995 IQUBQ8NA54 791 aa16.1■□□□□ 0.17
TNFRSF1A-216ENST00000543995 MRPS27Q92552 414 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-216ENST00000543995 DHX38Q92620 1227 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-216ENST00000543995 WNT8BQ93098 351 aa16.1■□□□□ 0.17
TNFRSF1A-216ENST00000543995 PYM1Q9BRP8 204 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-216ENST00000543995 HIPK3Q9H422 1215 aa16.1■□□□□ 0.17
TNFRSF1A-216ENST00000543995 BLOC1S4Q9NUP1 217 aa16.1■□□□□ 0.17
TNFRSF1A-216ENST00000543995 TBX21Q9UL17 535 aa16.1■□□□□ 0.17
TNFRSF1A-216ENST00000543995 AKT3Q9Y243 479 aa16.1■□□□□ 0.17
TNFRSF1A-216ENST00000543995 GAS2O43903 313 aaKnown RBP16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 PRPF40AO75400 957 aaKnown RBP16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 RPLP2P05387 115 aaKnown RBP16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 RAG1P15918 1043 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 SLC12A3P55017 1021 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 TMEM62Q0P6H9 643 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 TMEM87AQ8NBN3 555 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 LRRC15Q8TF66 581 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 TMEM143Q96AN5 459 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 NR2E3Q9Y5X4 410 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 IGKV6-21A0A0C4DH24 114 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 TRIM43BA6NCK2 446 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 M0QZ92 97 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 KIAA0355O15063 1070 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 VTNP04004 478 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 CTSHP09668 335 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 CKBP12277 381 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 SYN1P17600 705 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 SYKP43405 635 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 NDUFA8P51970 172 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 DRP2Q13474 957 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 NAALADL2Q58DX5 795 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 FAM102BQ5T8I3 360 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 IER5Q5VY09 327 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 RINT1Q6NUQ1 792 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 SV2BQ7L1I2 683 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 GPBP1Q86WP2 473 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 KIAA0319LQ8IZA0 1049 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 NME8Q8N427 588 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 MCPH1Q8NEM0 835 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 TCP11Q8WWU5 503 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 TRIM43Q96BQ3 446 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 PPP1R16BQ96T49 567 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 NOC4LQ9BVI4 516 aaKnown RBP16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 RUSC1Q9BVN2 902 aa16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 SUCLA2Q9P2R7 463 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 ZMYND8Q9ULU4 1186 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-216ENST00000543995 GOLGA6L22H0YM25 854 aa16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 PITPNM1O00562 1244 aa16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 CAND2O75155 1236 aa16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 KRT18P05783 430 aaKnown RBP16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 CYP11B2P19099 503 aa16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 CYP2C18P33260 490 aa16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 MKRN4PQ13434 485 aaPredicted RBP16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 E2F4Q16254 413 aa16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 TRIM71Q2Q1W2 868 aaKnown RBP16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 RHPN2Q8IUC4 686 aa16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 CEP57L1Q8IYX8 460 aa16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 LINC01465Q8N7H1 131 aa16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 PSPC1Q8WXF1 523 aaKnown RBP16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 SCLT1Q96NL6 688 aa16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 CUEDC2Q9H467 287 aa16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 GOLPH3LQ9H4A5 285 aa16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 XPNPEP1Q9NQW7 623 aa16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 GINS2Q9Y248 185 aa16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 HPSEQ9Y251 543 aa16.08■□□□□ 0.16
TNFRSF1A-216ENST00000543995 UMODL1Q5DID0 1318 aa16.07■□□□□ 0.16
TNFRSF1A-216ENST00000543995 GADD45BO75293 160 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF1A-216ENST00000543995 TIMP1P01033 207 aa16.07■□□□□ 0.16
TNFRSF1A-216ENST00000543995 SELPP16109 830 aa16.07■□□□□ 0.16
TNFRSF1A-216ENST00000543995 CCL23P55773 120 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms