RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 TRMT1LQ7Z2T5 733 aaKnown RBP25.66■■□□□ 1.7
CDKN3-207ENST00000543789 FAM228AQ86W67 206 aa25.66■■□□□ 1.7
CDKN3-207ENST00000543789 COLGALT1Q8NBJ5 622 aa25.66■■□□□ 1.7
CDKN3-207ENST00000543789 ELAC1Q9H777 363 aaKnown RBP25.66■■□□□ 1.7
CDKN3-207ENST00000543789 CCDC196A0A1B0GTZ2 297 aa25.65■■□□□ 1.7
CDKN3-207ENST00000543789 FSD2A1L4K1 749 aa25.65■■□□□ 1.7
CDKN3-207ENST00000543789 VTNP04004 478 aa25.65■■□□□ 1.7
CDKN3-207ENST00000543789 ERVFC1P60507 584 aa25.65■■□□□ 1.7
CDKN3-207ENST00000543789 SETQ01105 290 aaPredicted RBP25.65■■□□□ 1.7
CDKN3-207ENST00000543789 CBX2Q14781 532 aaPredicted RBP25.65■■□□□ 1.7
CDKN3-207ENST00000543789 BMP8AQ7Z5Y6 402 aa25.65■■□□□ 1.7
CDKN3-207ENST00000543789 SMAP1Q8IYB5 467 aaPredicted RBP25.65■■□□□ 1.7
CDKN3-207ENST00000543789 PHF7Q9BWX1 381 aaPredicted RBP25.65■■□□□ 1.7
CDKN3-207ENST00000543789 ZMYND12Q9H0C1 365 aa25.65■■□□□ 1.7
CDKN3-207ENST00000543789 CEP131Q9UPN4 1083 aa25.65■■□□□ 1.7
CDKN3-207ENST00000543789 PCDHA10Q9Y5I2 948 aa25.65■■□□□ 1.7
CDKN3-207ENST00000543789 C5orf42Q9H799 3197 aa25.64■■□□□ 1.7
CDKN3-207ENST00000543789 ESYT2A0FGR8 921 aa25.64■■□□□ 1.7
CDKN3-207ENST00000543789 PSAPP07602 524 aa25.64■■□□□ 1.7
CDKN3-207ENST00000543789 HMGB1P09429 215 aaKnown RBP25.64■■□□□ 1.7
CDKN3-207ENST00000543789 FGFR1P11362 822 aa25.64■■□□□ 1.7
CDKN3-207ENST00000543789 FGD1P98174 961 aa25.64■■□□□ 1.7
CDKN3-207ENST00000543789 DSC3Q14574 896 aa25.64■■□□□ 1.7
CDKN3-207ENST00000543789 DUSP6Q16828 381 aa25.64■■□□□ 1.7
CDKN3-207ENST00000543789 TRIM67Q6ZTA4 783 aa25.64■■□□□ 1.7
CDKN3-207ENST00000543789 CWH43Q9H720 699 aa25.64■■□□□ 1.7
CDKN3-207ENST00000543789 C6orf50Q9HD87 102 aa25.64■■□□□ 1.7
CDKN3-207ENST00000543789 HCSTQ9UBK5 93 aa25.64■■□□□ 1.7
CDKN3-207ENST00000543789 TCEAL9Q9UHQ7 104 aa25.64■■□□□ 1.7
CDKN3-207ENST00000543789 PUF60Q9UHX1 559 aaKnown RBP25.64■■□□□ 1.7
CDKN3-207ENST00000543789 TMEM221A6NGB7 291 aa25.63■■□□□ 1.69
CDKN3-207ENST00000543789 M0R296 226 aa25.63■■□□□ 1.69
CDKN3-207ENST00000543789 MAGEB2O15479 319 aa25.63■■□□□ 1.69
CDKN3-207ENST00000543789 LAG3P18627 525 aa25.63■■□□□ 1.69
CDKN3-207ENST00000543789 METAP2P50579 478 aaKnown RBP eCLIP25.63■■□□□ 1.69
CDKN3-207ENST00000543789 ZXDAP98168 799 aa25.63■■□□□ 1.69
CDKN3-207ENST00000543789 RBM10P98175 930 aaKnown RBP25.63■■□□□ 1.69
CDKN3-207ENST00000543789 VN1R2Q8NFZ6 395 aa25.63■■□□□ 1.69
CDKN3-207ENST00000543789 CCDC12Q8WUD4 166 aaPredicted RBP25.63■■□□□ 1.69
CDKN3-207ENST00000543789 PBXIP1Q96AQ6 731 aa25.63■■□□□ 1.69
CDKN3-207ENST00000543789 GABBR1Q9UBS5 961 aa25.63■■□□□ 1.69
CDKN3-207ENST00000543789 LZTS1Q9Y250 596 aa25.63■■□□□ 1.69
CDKN3-207ENST00000543789 FSCN2O14926 492 aa25.62■■□□□ 1.69
CDKN3-207ENST00000543789 ATF7P17544 494 aaPredicted RBP25.62■■□□□ 1.69
CDKN3-207ENST00000543789 PRR16Q569H4 304 aa25.62■■□□□ 1.69
CDKN3-207ENST00000543789 REXO1Q8N1G1 1221 aaKnown RBP25.62■■□□□ 1.69
CDKN3-207ENST00000543789 SUSD6Q92537 303 aa25.62■■□□□ 1.69
CDKN3-207ENST00000543789 RPGRIP1Q96KN7 1286 aa25.62■■□□□ 1.69
CDKN3-207ENST00000543789 TMEM117Q9H0C3 514 aa25.62■■□□□ 1.69
CDKN3-207ENST00000543789 ATG2AQ2TAZ0 1938 aa25.61■■□□□ 1.69
CDKN3-207ENST00000543789 ADAMTS3O15072 1205 aa25.61■■□□□ 1.69
CDKN3-207ENST00000543789 HOXA2O43364 376 aa25.61■■□□□ 1.69
CDKN3-207ENST00000543789 TMOD1P28289 359 aa25.61■■□□□ 1.69
CDKN3-207ENST00000543789 GNA11P29992 359 aa25.61■■□□□ 1.69
CDKN3-207ENST00000543789 NLRP11P59045 1033 aaKnown RBP25.61■■□□□ 1.69
CDKN3-207ENST00000543789 PLCB3Q01970 1234 aa25.61■■□□□ 1.69
CDKN3-207ENST00000543789 PKN1Q16512 942 aa25.61■■□□□ 1.69
CDKN3-207ENST00000543789 EFCAB12Q6NXP0 572 aa25.61■■□□□ 1.69
CDKN3-207ENST00000543789 TMEM184AQ6ZMB5 413 aa25.61■■□□□ 1.69
CDKN3-207ENST00000543789 ZNF710Q8N1W2 664 aa25.61■■□□□ 1.69
CDKN3-207ENST00000543789 MRPS27Q92552 414 aaKnown RBP25.61■■□□□ 1.69
CDKN3-207ENST00000543789 FAM167AQ96KS9 214 aa25.61■■□□□ 1.69
CDKN3-207ENST00000543789 CASD1Q96PB1 797 aa25.61■■□□□ 1.69
CDKN3-207ENST00000543789 AKT3Q9Y243 479 aa25.61■■□□□ 1.69
CDKN3-207ENST00000543789 SAMM50Q9Y512 469 aa25.61■■□□□ 1.69
CDKN3-207ENST00000543789 SRGAP2BP0DMP2 458 aa25.6■■□□□ 1.69
CDKN3-207ENST00000543789 ZSCAN20P17040 1043 aaPredicted RBP25.6■■□□□ 1.69
CDKN3-207ENST00000543789 CIITAP33076 1130 aa25.6■■□□□ 1.69
CDKN3-207ENST00000543789 CLCN3P51790 818 aa25.6■■□□□ 1.69
CDKN3-207ENST00000543789 MAP7D2Q96T17 732 aa25.6■■□□□ 1.69
CDKN3-207ENST00000543789 PRPF3O43395 683 aaKnown RBP25.59■■□□□ 1.69
CDKN3-207ENST00000543789 EIF4BP23588 611 aaKnown RBP25.59■■□□□ 1.69
CDKN3-207ENST00000543789 APOBRQ0VD83 1088 aa25.59■■□□□ 1.69
CDKN3-207ENST00000543789 PLPP4Q5VZY2 271 aa25.59■■□□□ 1.69
CDKN3-207ENST00000543789 LRRC55Q6ZSA7 311 aa25.59■■□□□ 1.69
CDKN3-207ENST00000543789 TCF25Q9BQ70 676 aa25.59■■□□□ 1.69
CDKN3-207ENST00000543789 ADAMTS10Q9H324 1103 aa25.59■■□□□ 1.69
CDKN3-207ENST00000543789 NGRNQ9NPE2 291 aaKnown RBP25.59■■□□□ 1.69
CDKN3-207ENST00000543789 ENTPD7Q9NQZ7 604 aa25.59■■□□□ 1.69
CDKN3-207ENST00000543789 NRBP2Q9NSY0 501 aa25.59■■□□□ 1.69
CDKN3-207ENST00000543789 WDR64B1ANS9 1081 aa25.58■■□□□ 1.69
CDKN3-207ENST00000543789 KRT17Q04695 432 aa25.58■■□□□ 1.69
CDKN3-207ENST00000543789 KCNC3Q14003 757 aa25.58■■□□□ 1.69
CDKN3-207ENST00000543789 KCNT2Q6UVM3 1135 aa25.58■■□□□ 1.69
CDKN3-207ENST00000543789 Q6ZUG5 572 aa25.58■■□□□ 1.69
CDKN3-207ENST00000543789 ABI1Q8IZP0 508 aa25.58■■□□□ 1.69
CDKN3-207ENST00000543789 LINC01465Q8N7H1 131 aa25.58■■□□□ 1.69
CDKN3-207ENST00000543789 RASGRP4Q8TDF6 673 aa25.58■■□□□ 1.69
CDKN3-207ENST00000543789 S1PR5Q9H228 398 aa25.58■■□□□ 1.69
CDKN3-207ENST00000543789 RNF19AQ9NV58 838 aa25.58■■□□□ 1.69
CDKN3-207ENST00000543789 CPA1P15085 419 aa25.57■■□□□ 1.68
CDKN3-207ENST00000543789 TECP42680 631 aa25.57■■□□□ 1.68
CDKN3-207ENST00000543789 AKAP17AQ02040 695 aaKnown RBP25.57■■□□□ 1.68
CDKN3-207ENST00000543789 ANKRD54Q6NXT1 300 aa25.57■■□□□ 1.68
CDKN3-207ENST00000543789 SKAP1Q86WV1 359 aa25.57■■□□□ 1.68
CDKN3-207ENST00000543789 ECHDC2Q86YB7 292 aa25.57■■□□□ 1.68
CDKN3-207ENST00000543789 SUGP1Q8IWZ8 645 aaKnown RBP25.57■■□□□ 1.68
CDKN3-207ENST00000543789 LRRC43Q8N309 656 aa25.57■■□□□ 1.68
CDKN3-207ENST00000543789 LRRC71Q8N4P6 559 aa25.57■■□□□ 1.68
CDKN3-207ENST00000543789 BICD2Q8TD16 824 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms