RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 FAM107AO95990 144 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 RAD23BP54727 409 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 CC2D2BQ6DHV5 1058 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 ABTB1Q969K4 478 aaPredicted RBP20.81■□□□□ 0.92
SUDS3-204ENST00000543473 TMEM60Q9H2L4 133 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 KRT1P04264 644 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 SPATA31A1Q5TZJ5 1347 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 ATG9AQ7Z3C6 839 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 MMGT1Q8N4V1 131 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 MAML1Q92585 1016 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 MASTLQ96GX5 879 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 SEC16BQ96JE7 1060 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 ACCSQ96QU6 501 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 NACC1Q96RE7 527 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 PCDHB4Q9Y5E5 795 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 HNRNPDLO14979 420 aaKnown RBP20.81■□□□□ 0.92
SUDS3-204ENST00000543473 CHRNA3P32297 505 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 COASYQ13057 564 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 BBS9Q3SYG4 887 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 EAPPQ56P03 285 aaPredicted RBP20.81■□□□□ 0.92
SUDS3-204ENST00000543473 LRIG3Q6UXM1 1119 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 CENPUQ71F23 418 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 RAD54LQ92698 747 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 CYFIP2Q96F07 1278 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 ASPHQ12797 758 aa20.8■□□□□ 0.92
SUDS3-204ENST00000543473 VPS72Q15906 364 aa20.8■□□□□ 0.92
SUDS3-204ENST00000543473 IGDCC4Q8TDY8 1250 aa20.8■□□□□ 0.92
SUDS3-204ENST00000543473 TMEM206Q9H813 350 aa20.8■□□□□ 0.92
SUDS3-204ENST00000543473 TESPA1A2RU30 521 aaPredicted RBP20.8■□□□□ 0.92
SUDS3-204ENST00000543473 NMT2O60551 498 aa20.8■□□□□ 0.92
SUDS3-204ENST00000543473 ANTXR2P58335 489 aa20.8■□□□□ 0.92
SUDS3-204ENST00000543473 DCAF15Q66K64 600 aa20.8■□□□□ 0.92
SUDS3-204ENST00000543473 RSRC2Q7L4I2 434 aaKnown RBP20.8■□□□□ 0.92
SUDS3-204ENST00000543473 COA1Q9GZY4 146 aa20.8■□□□□ 0.92
SUDS3-204ENST00000543473 SAYSD1Q9NPB0 183 aa20.8■□□□□ 0.92
SUDS3-204ENST00000543473 PIK3CAP42336 1068 aa20.8■□□□□ 0.92
SUDS3-204ENST00000543473 BASP1P80723 227 aaKnown RBP20.8■□□□□ 0.92
SUDS3-204ENST00000543473 SPICE1Q8N0Z3 855 aa20.8■□□□□ 0.92
SUDS3-204ENST00000543473 PYROXD1Q8WU10 500 aa20.8■□□□□ 0.92
SUDS3-204ENST00000543473 TMEM51Q9NW97 253 aa20.8■□□□□ 0.92
SUDS3-204ENST00000543473 ZFP69BQ9UJL9 534 aa20.8■□□□□ 0.92
SUDS3-204ENST00000543473 GPR162Q16538 588 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 CERKQ8TCT0 537 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 RNF34Q969K3 372 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 RNPC3Q96LT9 517 aaKnown RBP20.79■□□□□ 0.92
SUDS3-204ENST00000543473 CSADQ9Y600 493 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 IVNS1ABPQ9Y6Y0 642 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 SSU72P8A0A1W2PR75 194 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 DIAPH2O60879 1101 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 ALAS1P13196 640 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 RNF207Q6ZRF8 634 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 OR2W6PQ8NHA6 318 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 TRIM9Q9C026 710 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 GGT7Q9UJ14 662 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 PPP2R5CQ13362 524 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 BIRC2Q13490 618 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 NUDCD1Q96RS6 583 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 SLC40A1Q9NP59 571 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 PFDN4Q9NQP4 134 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 H0YCG3 227 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 TRPA1O75762 1119 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 NR1H3Q13133 447 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 TBC1D10BQ4KMP7 808 aaPredicted RBP20.79■□□□□ 0.92
SUDS3-204ENST00000543473 RFX6Q8HWS3 928 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 CPVLQ9H3G5 476 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 FGFR1OP2Q9NVK5 253 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 TFR2Q9UP52 801 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 AK9Q5TCS8 1911 aa20.79■□□□□ 0.92
SUDS3-204ENST00000543473 DYNLT1P63172 113 aa20.78■□□□□ 0.92
SUDS3-204ENST00000543473 GPC5P78333 572 aa20.78■□□□□ 0.92
SUDS3-204ENST00000543473 RPS6KA2Q15349 733 aa20.78■□□□□ 0.92
SUDS3-204ENST00000543473 PTGISQ16647 500 aa20.78■□□□□ 0.92
SUDS3-204ENST00000543473 PDIK1LQ8N165 341 aa20.78■□□□□ 0.92
SUDS3-204ENST00000543473 MROH2AA6NES4 1674 aa20.78■□□□□ 0.92
SUDS3-204ENST00000543473 NR3C1P04150 777 aa20.78■□□□□ 0.92
SUDS3-204ENST00000543473 CYP2D6P10635 497 aa20.78■□□□□ 0.92
SUDS3-204ENST00000543473 GRAMD1BQ3KR37 738 aa20.78■□□□□ 0.92
SUDS3-204ENST00000543473 ELOA2Q8IYF1 753 aaPredicted RBP20.78■□□□□ 0.92
SUDS3-204ENST00000543473 NT5C2P49902 561 aa20.78■□□□□ 0.92
SUDS3-204ENST00000543473 NFIXQ14938 502 aa20.78■□□□□ 0.92
SUDS3-204ENST00000543473 CDC37Q16543 378 aaPredicted RBP20.78■□□□□ 0.92
SUDS3-204ENST00000543473 SLC18A3Q16572 532 aa20.78■□□□□ 0.92
SUDS3-204ENST00000543473 TSPYL2Q9H2G4 693 aaPredicted RBP20.78■□□□□ 0.92
SUDS3-204ENST00000543473 TTLL3Q9Y4R7 772 aa20.78■□□□□ 0.92
SUDS3-204ENST00000543473 CEMIPQ8WUJ3 1361 aa20.78■□□□□ 0.92
SUDS3-204ENST00000543473 GRIN1Q05586 938 aa20.78■□□□□ 0.92
SUDS3-204ENST00000543473 SH3GL3Q99963 347 aa20.78■□□□□ 0.92
SUDS3-204ENST00000543473 SFI1A8K8P3 1242 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 E9PMD0 336 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 DPY19L2Q6NUT2 758 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 MAP7D3Q8IWC1 876 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 RASSF10A6NK89 507 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 NCAPHQ15003 741 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 SFR1Q86XK3 245 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 TTLL6Q8N841 843 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 XPO6Q96QU8 1125 aaKnown RBP20.77■□□□□ 0.92
SUDS3-204ENST00000543473 ZNF577Q9BSK1 485 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 WDR11Q9BZH6 1224 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 CCSER1Q9C0I3 900 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 AS3MTQ9HBK9 375 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms