RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 HOMER2Q9NSB8 354 aa11.96□□□□□ -0.49
RFC5-209ENST00000543153 KBTBD4Q9NVX7 518 aa11.96□□□□□ -0.49
RFC5-209ENST00000543153 NYAP2Q9P242 653 aa11.96□□□□□ -0.49
RFC5-209ENST00000543153 FAM184BQ9ULE4 1060 aa11.96□□□□□ -0.49
RFC5-209ENST00000543153 ADAMTS5Q9UNA0 930 aa11.96□□□□□ -0.49
RFC5-209ENST00000543153 TACC3Q9Y6A5 838 aa11.96□□□□□ -0.49
RFC5-209ENST00000543153 ROBO3Q96MS0 1386 aa11.95□□□□□ -0.5
RFC5-209ENST00000543153 DCDC2CA8MYV0 355 aa11.95□□□□□ -0.5
RFC5-209ENST00000543153 TSPY3P0CV98 308 aa11.95□□□□□ -0.5
RFC5-209ENST00000543153 TSPY8P0CW00 308 aa11.95□□□□□ -0.5
RFC5-209ENST00000543153 BMP6P22004 513 aa11.95□□□□□ -0.5
RFC5-209ENST00000543153 PDE4BQ07343 736 aa11.95□□□□□ -0.5
RFC5-209ENST00000543153 FAM109BQ6ICB4 259 aaPredicted RBP11.95□□□□□ -0.5
RFC5-209ENST00000543153 AGMOQ6ZNB7 445 aa11.95□□□□□ -0.5
RFC5-209ENST00000543153 ALYREFQ86V81 257 aaKnown RBP11.95□□□□□ -0.5
RFC5-209ENST00000543153 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.95□□□□□ -0.5
RFC5-209ENST00000543153 ZNF654Q8IZM8 581 aa11.95□□□□□ -0.5
RFC5-209ENST00000543153 LRRC47Q8N1G4 583 aaKnown RBP11.95□□□□□ -0.5
RFC5-209ENST00000543153 KCNB2Q92953 911 aa11.95□□□□□ -0.5
RFC5-209ENST00000543153 OSBP2Q969R2 916 aa11.95□□□□□ -0.5
RFC5-209ENST00000543153 CHMP4CQ96CF2 233 aa11.95□□□□□ -0.5
RFC5-209ENST00000543153 GUCD1Q96NT3 240 aa11.95□□□□□ -0.5
RFC5-209ENST00000543153 FSD1Q9BTV5 496 aa11.95□□□□□ -0.5
RFC5-209ENST00000543153 SPC25Q9HBM1 224 aa11.95□□□□□ -0.5
RFC5-209ENST00000543153 RAVER2Q9HCJ3 691 aaKnown RBP11.95□□□□□ -0.5
RFC5-209ENST00000543153 SYNGAP1Q96PV0 1343 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 SYNRGQ9UMZ2 1314 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 TRIM43BA6NCK2 446 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 RNF225M0QZC1 329 aaPredicted RBP11.94□□□□□ -0.5
RFC5-209ENST00000543153 M0R2C6 588 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 TM4SF5O14894 197 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 ERC2O15083 957 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 DDX3YO15523 660 aaKnown RBP11.94□□□□□ -0.5
RFC5-209ENST00000543153 TTLL1O95922 423 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 C6orf222P0C671 652 aaPredicted RBP11.94□□□□□ -0.5
RFC5-209ENST00000543153 ZNF865P0CJ78 1059 aaPredicted RBP11.94□□□□□ -0.5
RFC5-209ENST00000543153 FPGSQ05932 587 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 FOXD4L6Q3SYB3 417 aaPredicted RBP11.94□□□□□ -0.5
RFC5-209ENST00000543153 SCARA3Q6AZY7 606 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 FOXD4L3Q6VB84 417 aaPredicted RBP11.94□□□□□ -0.5
RFC5-209ENST00000543153 NOL8Q76FK4 1167 aaKnown RBP11.94□□□□□ -0.5
RFC5-209ENST00000543153 MSL3Q8N5Y2 521 aaKnown RBP11.94□□□□□ -0.5
RFC5-209ENST00000543153 PHC3Q8NDX5 983 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 REPS2Q8NFH8 660 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 TRIM43Q96BQ3 446 aaPredicted RBP11.94□□□□□ -0.5
RFC5-209ENST00000543153 CEP95Q96GE4 821 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 NACC1Q96RE7 527 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 TGIF2Q9GZN2 237 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 MRPL18Q9H0U6 180 aaKnown RBP11.94□□□□□ -0.5
RFC5-209ENST00000543153 NAPBQ9H115 298 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 EPB41L4AQ9HCS5 686 aaPredicted RBP11.94□□□□□ -0.5
RFC5-209ENST00000543153 STK17AQ9UEE5 414 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 FBXO40Q9UH90 709 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 FEM1BQ9UK73 627 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 RLFQ13129 1914 aa11.94□□□□□ -0.5
RFC5-209ENST00000543153 ACLYP53396 1101 aa11.93□□□□□ -0.5
RFC5-209ENST00000543153 STK35Q8TDR2 534 aa11.93□□□□□ -0.5
RFC5-209ENST00000543153 GLT1D1Q96MS3 346 aa11.93□□□□□ -0.5
RFC5-209ENST00000543153 CCSER2Q9H7U1 834 aa11.93□□□□□ -0.5
RFC5-209ENST00000543153 MTMR4Q9NYA4 1195 aa11.93□□□□□ -0.5
RFC5-209ENST00000543153 KCNK4Q9NYG8 393 aa11.93□□□□□ -0.5
RFC5-209ENST00000543153 DDX41Q9UJV9 622 aaKnown RBP11.93□□□□□ -0.5
RFC5-209ENST00000543153 RIPK3Q9Y572 518 aa11.93□□□□□ -0.5
RFC5-209ENST00000543153 LTBP2Q14767 1821 aa11.93□□□□□ -0.5
RFC5-209ENST00000543153 MROH7Q68CQ1 1323 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 MYH7P12883 1935 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 CUL9Q8IWT3 2517 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 LOC100289279A0A1B0GTE1 492 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 TMEM232C9JQI7 657 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 ADAM11O75078 769 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 ADAMTS4O75173 837 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 BMP3P12645 472 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 FOSL2P15408 326 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 STAT2P52630 851 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 SMAD3P84022 425 aaKnown RBP11.92□□□□□ -0.5
RFC5-209ENST00000543153 ACVR2BQ13705 512 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 KCNA10Q16322 511 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 ZNF394Q53GI3 561 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 SLFN13Q68D06 897 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 PDZD3Q86UT5 571 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 IFNL3Q8IZI9 196 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 PCSK9Q8NBP7 692 aaKnown RBP11.92□□□□□ -0.5
RFC5-209ENST00000543153 CHST13Q8NET6 341 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 MAFAQ8NHW3 353 aaPredicted RBP11.92□□□□□ -0.5
RFC5-209ENST00000543153 CDX2Q99626 313 aaPredicted RBP11.92□□□□□ -0.5
RFC5-209ENST00000543153 NRSN2Q9GZP1 204 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 MIR1-1HGQ9H1L0 117 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 SLC38A10Q9HBR0 1119 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 KRT82Q9NSB4 513 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 STX8Q9UNK0 236 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 TLR6Q9Y2C9 796 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.92□□□□□ -0.5
RFC5-209ENST00000543153 COL6A3P12111 3177 aa11.92□□□□□ -0.5
RFC5-209ENST00000543153 TTC41PQ6P2S7 1318 aa11.91□□□□□ -0.5
RFC5-209ENST00000543153 COL11A1P12107 1806 aaPredicted RBP11.91□□□□□ -0.5
RFC5-209ENST00000543153 TSPY2A6NKD2 308 aa11.91□□□□□ -0.5
RFC5-209ENST00000543153 ATP2A1O14983 1001 aa11.91□□□□□ -0.5
RFC5-209ENST00000543153 DUSP11O75319 330 aaKnown RBP11.91□□□□□ -0.5
RFC5-209ENST00000543153 SNAI1O95863 264 aaPredicted RBP11.91□□□□□ -0.5
RFC5-209ENST00000543153 SLC1A4P43007 532 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms