RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 SYKP43405 635 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 CHMP4BP1P59074 171 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 IGBP1P78318 339 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 FAM160A1Q05DH4 1040 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 CSPP1Q1MSJ5 1256 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 TRIM60Q495X7 471 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 PADI6Q6TGC4 694 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 NECAB2Q7Z6G3 386 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 CKAP2LQ8IYA6 745 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 KIAA0319LQ8IZA0 1049 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 C7orf31Q8N865 590 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 IQUBQ8NA54 791 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 LARP4BQ92615 738 aaKnown RBP11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 STAMQ92783 540 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 DNAJC19Q96DA6 116 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 PAGE5Q96GU1 130 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 PCDH10Q9P2E7 1040 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 CCDC39Q9UFE4 941 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 PCDHA2Q9Y5H9 948 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 ALPK3Q96L96 1907 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 RRN3P2A6NIE6 340 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 CCDC85CA6NKD9 419 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 GUCY2CP25092 1073 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 ARL2P36404 184 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 TXLNAP40222 546 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 STAT6P42226 847 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 TLE2Q04725 743 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 FAAP100Q0VG06 881 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 EMC2Q15006 297 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 CNNM4Q6P4Q7 775 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 KRBA2Q6ZNG9 492 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 OTUD6AQ7L8S5 288 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 LRRC71Q8N4P6 559 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 VTI1AQ96AJ9 217 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 CDK5RAP3Q96JB5 506 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 TOX2Q96NM4 488 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 FIZ1Q96SL8 496 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 OSBPL7Q9BZF2 842 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 GPRC5CQ9NQ84 441 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 BMP2KQ9NSY1 1161 aaPredicted RBP11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 TUBE1Q9UJT0 475 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 PPME1Q9Y570 386 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 CEP290O15078 2479 aa11.88□□□□□ -0.51
NPIPB3-210ENST00000542817 FRMD3A2A2Y4 597 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 ARHGEF35A5YM69 484 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 RSPH10B2B2RC85 870 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 USO1O60763 962 aaKnown RBP11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 DGAT1O75907 488 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 PRR29P0C7W0 189 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 RSPH10BP0C881 870 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 CYP2C9P11712 490 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 RFC5P40937 340 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 CLCN3P51790 818 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 CUL4BQ13620 913 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 GIT2Q14161 759 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 GSE1Q14687 1217 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 GPNMBQ14956 572 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 PTGISQ16647 500 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 RPAINQ86UA6 219 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 GPBP1Q86WP2 473 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 ASAP3Q8TDY4 903 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 BSNDQ8WZ55 320 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 TMEM143Q96AN5 459 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 VWCEQ96DN2 955 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 TIGD1Q96MW7 591 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 SEZ6LQ9BYH1 1024 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 CUEDC2Q9H467 287 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 DACT1Q9NYF0 836 aa11.87□□□□□ -0.51
NPIPB3-210ENST00000542817 SMIM35A0A1B0GVV1 85 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 KLRC4O43908 158 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 PQBP1O60828 265 aaKnown RBP11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 GPR32O75388 356 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 ITGB8P26012 769 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 ZNF131P52739 623 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 RTP1P59025 263 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 CACNB1Q02641 598 aaPredicted RBP11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 EHHADHQ08426 723 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 RBL2Q08999 1139 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 MGAT3Q09327 533 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 TBC1D8BQ0IIM8 1120 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 DHX8Q14562 1220 aaKnown RBP11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 MBTPS1Q14703 1052 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 FAM47CQ5HY64 1035 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 EFCAB12Q6NXP0 572 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 SV2BQ7L1I2 683 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 KSR1Q8IVT5 923 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 UBE2Q2Q8WVN8 375 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 DDX12PQ92771 950 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 C7orf25Q9BPX7 421 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 REEP2Q9BRK0 252 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 TRIM9Q9C026 710 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 TNMDQ9H2S6 317 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 ADAMTS10Q9H324 1103 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 CDHR5Q9HBB8 845 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 USP25Q9UHP3 1055 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 TBX21Q9UL17 535 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 EVPLQ92817 2033 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 UMODL1Q5DID0 1318 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 KAT6AQ92794 2004 aa11.86□□□□□ -0.51
NPIPB3-210ENST00000542817 TRIM43BA6NCK2 446 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms