RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 PPP2R5AQ15172 486 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 C8orf74Q6P047 294 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 CCDC174Q6PII3 467 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 NIPA1Q7RTP0 329 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 VPS36Q86VN1 386 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 GPIHBP1Q8IV16 184 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 SLC9A9Q8IVB4 645 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 TPH2Q8IWU9 490 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 FAM186BQ8IYM0 893 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 OGFOD1Q8N543 542 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 RBM46Q8TBY0 533 aaKnown RBP7.16□□□□□ -1.26
PTPRO-208ENST00000542557 ZNF526Q8TF50 670 aaPredicted RBP7.16□□□□□ -1.26
PTPRO-208ENST00000542557 TMEM174Q8WUU8 243 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 CAVIN3Q969G5 261 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 ZNF577Q9BSK1 485 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 LRRC1Q9BTT6 524 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.16□□□□□ -1.26
PTPRO-208ENST00000542557 KDM4CQ9H3R0 1056 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 DMAC2Q9NW81 257 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 GCNT4Q9P109 453 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 DMGDHQ9UI17 866 aaKnown RBP7.16□□□□□ -1.26
PTPRO-208ENST00000542557 NAGPAQ9UK23 515 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 C21orf2O43822 256 aa7.15□□□□□ -1.26
PTPRO-208ENST00000542557 RPS6KA5O75582 802 aa7.15□□□□□ -1.26
PTPRO-208ENST00000542557 PPP1R37O75864 691 aa7.15□□□□□ -1.26
PTPRO-208ENST00000542557 CAP2P40123 477 aa7.15□□□□□ -1.26
PTPRO-208ENST00000542557 HS2ST1Q7LGA3 356 aa7.15□□□□□ -1.26
PTPRO-208ENST00000542557 ZNF720Q7Z2F6 126 aa7.15□□□□□ -1.26
PTPRO-208ENST00000542557 MYCT1Q8N699 235 aa7.15□□□□□ -1.26
PTPRO-208ENST00000542557 PIGOQ8TEQ8 1089 aa7.15□□□□□ -1.26
PTPRO-208ENST00000542557 STRA6Q9BX79 667 aa7.15□□□□□ -1.26
PTPRO-208ENST00000542557 UNC45AQ9H3U1 944 aa7.15□□□□□ -1.26
PTPRO-208ENST00000542557 RBM12Q9NTZ6 932 aaKnown RBP7.15□□□□□ -1.26
PTPRO-208ENST00000542557 CLIC2O15247 247 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 CHMP2AO43633 222 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 RNF40O75150 1001 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 ICAM1P05362 532 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 ASNSP08243 561 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 MAPTP10636 758 aaKnown RBP7.15□□□□□ -1.27
PTPRO-208ENST00000542557 RFX1P22670 979 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 NMT1P30419 496 aaKnown RBP7.15□□□□□ -1.27
PTPRO-208ENST00000542557 CXCR5P32302 372 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 PTGER2P43116 358 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 LMAN1P49257 510 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 GYS2P54840 703 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 ARID5AQ03989 594 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 KCNA1Q09470 495 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 ALCAMQ13740 583 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 EZH2Q15910 746 aaKnown RBP7.15□□□□□ -1.27
PTPRO-208ENST00000542557 TCERG1LQ5VWI1 586 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 ALKBH5Q6P6C2 394 aaKnown RBP7.15□□□□□ -1.27
PTPRO-208ENST00000542557 LDHDQ86WU2 507 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 FAM178BQ8IXR5 827 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 GSPT2Q8IYD1 628 aaKnown RBP7.15□□□□□ -1.27
PTPRO-208ENST00000542557 TTLL6Q8N841 843 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 AGBL3Q8NEM8 1001 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 ZBED3Q96IU2 234 aaPredicted RBP7.15□□□□□ -1.27
PTPRO-208ENST00000542557 MXRA8Q9BRK3 442 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 PACSIN1Q9BY11 444 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 PGAP2Q9UHJ9 254 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 ARIH1Q9Y4X5 557 aaPredicted RBP7.15□□□□□ -1.27
PTPRO-208ENST00000542557 PCDHB13Q9Y5F0 798 aa7.15□□□□□ -1.27
PTPRO-208ENST00000542557 IPO5O00410 1097 aaKnown RBP7.14□□□□□ -1.27
PTPRO-208ENST00000542557 FTCDO95954 541 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 POLD1P28340 1107 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 STAT1P42224 750 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 NPEPPSP55786 919 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 SF3B2Q13435 895 aaKnown RBP7.14□□□□□ -1.27
PTPRO-208ENST00000542557 SAMD3Q8N6K7 520 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 LRRC57Q8N9N7 239 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 HDAC7Q8WUI4 952 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 PSMB7Q99436 277 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 LXNQ9BS40 222 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 BCAS3Q9H6U6 928 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 GDF3Q9NR23 364 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 AGPAT3Q9NRZ7 376 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 STK32BQ9NY57 414 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 EHD2Q9NZN4 543 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 WRAP73Q9P2S5 460 aaPredicted RBP7.14□□□□□ -1.27
PTPRO-208ENST00000542557 AJAP1Q9UKB5 411 aaPredicted RBP7.14□□□□□ -1.27
PTPRO-208ENST00000542557 ARHGEF35A5YM69 484 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 GOLGA6BA6NDN3 693 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 AGPSO00116 658 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 RAD17O75943 681 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 ARP10275 920 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 ACTN2P35609 894 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 FMO5P49326 533 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 MAPK7Q13164 816 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 RPS6KA1Q15418 735 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 SLFN11Q7Z7L1 901 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 IFT20Q8IY31 132 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 LARGE2Q8N3Y3 721 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 EIF1ADQ8N9N8 165 aaKnown RBP7.14□□□□□ -1.27
PTPRO-208ENST00000542557 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.14□□□□□ -1.27
PTPRO-208ENST00000542557 TAF4BQ92750 862 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 PBKQ96KB5 322 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 SH3GL2Q99962 352 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 FAM204AQ9H8W3 233 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 GINM1Q9NU53 330 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 MAP3K20Q9NYL2 800 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms