RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 SLC1A4P43007 532 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 TDO2P48775 406 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 PURAQ00577 322 aaKnown RBP9.41□□□□□ -0.9
CLPB-211ENST00000542555 PDE4BQ07343 736 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 IKBKEQ14164 716 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 SETDB1Q15047 1291 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 PWP2Q15269 919 aaKnown RBP9.41□□□□□ -0.9
CLPB-211ENST00000542555 PTGISQ16647 500 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 SBK1Q52WX2 424 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 TAPT1Q6NXT6 567 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 CNKSR3Q6P9H4 555 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 GIMAP6Q6P9H5 292 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 Q6ZS46 218 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 LRRC47Q8N1G4 583 aaKnown RBP9.41□□□□□ -0.9
CLPB-211ENST00000542555 STAG1Q8WVM7 1258 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 MKL1Q969V6 931 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 FGD4Q96M96 766 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 SAMD11Q96NU1 681 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 POP1Q99575 1024 aaKnown RBP9.41□□□□□ -0.9
CLPB-211ENST00000542555 PRRX2Q99811 253 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 CEP41Q9BYV8 373 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 MUC3BQ9H195 1237 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 BOLA2Q9H3K6 86 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 CD320Q9NPF0 282 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 PDGFCQ9NRA1 345 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 PRKAG3Q9UGI9 489 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 CCPG1Q9ULG6 757 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 BDP1A6H8Y1 2624 aa9.41□□□□□ -0.9
CLPB-211ENST00000542555 ZBED9Q6R2W3 1325 aa9.4□□□□□ -0.9
CLPB-211ENST00000542555 XYLBO75191 536 aa9.4□□□□□ -0.9
CLPB-211ENST00000542555 LGR5O75473 907 aa9.4□□□□□ -0.9
CLPB-211ENST00000542555 IL9P15248 144 aa9.4□□□□□ -0.9
CLPB-211ENST00000542555 GNAT2P19087 354 aa9.4□□□□□ -0.9
CLPB-211ENST00000542555 ERVK-21P61565 698 aa9.4□□□□□ -0.9
CLPB-211ENST00000542555 WDR5P61964 334 aaKnown RBP9.4□□□□□ -0.9
CLPB-211ENST00000542555 PPP2R5BQ15173 497 aa9.4□□□□□ -0.9
CLPB-211ENST00000542555 PKN1Q16512 942 aa9.4□□□□□ -0.9
CLPB-211ENST00000542555 TIGD5Q53EQ6 642 aa9.4□□□□□ -0.9
CLPB-211ENST00000542555 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.4□□□□□ -0.9
CLPB-211ENST00000542555 NSUN5Q96P11 429 aaKnown RBP9.4□□□□□ -0.9
CLPB-211ENST00000542555 NACAP1Q9BZK3 213 aa9.4□□□□□ -0.9
CLPB-211ENST00000542555 SUGCTQ9HAC7 445 aa9.4□□□□□ -0.9
CLPB-211ENST00000542555 MTMR4Q9NYA4 1195 aa9.4□□□□□ -0.9
CLPB-211ENST00000542555 CYP39A1Q9NYL5 469 aa9.4□□□□□ -0.9
CLPB-211ENST00000542555 PNMA2Q9UL42 364 aa9.4□□□□□ -0.9
CLPB-211ENST00000542555 TNNQ9UQP3 1299 aa9.4□□□□□ -0.9
CLPB-211ENST00000542555 INSL6Q9Y581 213 aa9.4□□□□□ -0.9
CLPB-211ENST00000542555 CDH23Q9H251 3354 aa9.4□□□□□ -0.91
CLPB-211ENST00000542555 PTPDC1A2A3K4 754 aa9.39□□□□□ -0.91
CLPB-211ENST00000542555 NCK2O43639 380 aa9.39□□□□□ -0.91
CLPB-211ENST00000542555 LPXNO60711 386 aa9.39□□□□□ -0.91
CLPB-211ENST00000542555 RAB11FIP3O75154 756 aa9.39□□□□□ -0.91
CLPB-211ENST00000542555 AMHP03971 560 aa9.39□□□□□ -0.91
CLPB-211ENST00000542555 ATP5JP18859 108 aa9.39□□□□□ -0.91
CLPB-211ENST00000542555 C11orf91Q3C1V1 193 aa9.39□□□□□ -0.91
CLPB-211ENST00000542555 CEP85Q6P2H3 762 aa9.39□□□□□ -0.91
CLPB-211ENST00000542555 LRRC8DQ7L1W4 858 aa9.39□□□□□ -0.91
CLPB-211ENST00000542555 CMTR1Q8N1G2 835 aaKnown RBP9.39□□□□□ -0.91
CLPB-211ENST00000542555 CACTIN-AS1Q8N1I8 211 aa9.39□□□□□ -0.91
CLPB-211ENST00000542555 SCFD2Q8WU76 684 aa9.39□□□□□ -0.91
CLPB-211ENST00000542555 CEP95Q96GE4 821 aa9.39□□□□□ -0.91
CLPB-211ENST00000542555 UBL7Q96S82 380 aaPredicted RBP9.39□□□□□ -0.91
CLPB-211ENST00000542555 IRF2BPLQ9H1B7 796 aa9.39□□□□□ -0.91
CLPB-211ENST00000542555 PPME1Q9Y570 386 aa9.39□□□□□ -0.91
CLPB-211ENST00000542555 PRRC2BQ5JSZ5 2229 aaKnown RBP9.39□□□□□ -0.91
CLPB-211ENST00000542555 PLA2G6O60733 806 aa9.38□□□□□ -0.91
CLPB-211ENST00000542555 GJB5O95377 273 aa9.38□□□□□ -0.91
CLPB-211ENST00000542555 CASTP20810 708 aaKnown RBP9.38□□□□□ -0.91
CLPB-211ENST00000542555 ALDH5A1P51649 535 aaPredicted RBP9.38□□□□□ -0.91
CLPB-211ENST00000542555 RCSD1Q6JBY9 416 aa9.38□□□□□ -0.91
CLPB-211ENST00000542555 FAM117BQ6P1L5 589 aa9.38□□□□□ -0.91
CLPB-211ENST00000542555 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.38□□□□□ -0.91
CLPB-211ENST00000542555 ZDHHC13Q8IUH4 622 aa9.38□□□□□ -0.91
CLPB-211ENST00000542555 SUGP1Q8IWZ8 645 aaKnown RBP9.38□□□□□ -0.91
CLPB-211ENST00000542555 C7orf31Q8N865 590 aa9.38□□□□□ -0.91
CLPB-211ENST00000542555 MRPL38Q96DV4 380 aaKnown RBP9.38□□□□□ -0.91
CLPB-211ENST00000542555 HAUS7Q99871 368 aa9.38□□□□□ -0.91
CLPB-211ENST00000542555 LCHNA4D1U4 455 aa9.37□□□□□ -0.91
CLPB-211ENST00000542555 LINC01553A4QN01 128 aa9.37□□□□□ -0.91
CLPB-211ENST00000542555 H3BQ06 376 aaPredicted RBP9.37□□□□□ -0.91
CLPB-211ENST00000542555 PRDM1O75626 825 aa9.37□□□□□ -0.91
CLPB-211ENST00000542555 WNT11O96014 354 aa9.37□□□□□ -0.91
CLPB-211ENST00000542555 TXNP10599 105 aaKnown RBP9.37□□□□□ -0.91
CLPB-211ENST00000542555 MCCP23508 829 aa9.37□□□□□ -0.91
CLPB-211ENST00000542555 CALML3P27482 149 aa9.37□□□□□ -0.91
CLPB-211ENST00000542555 TFAP4Q01664 338 aa9.37□□□□□ -0.91
CLPB-211ENST00000542555 BAATQ14032 418 aaPredicted RBP9.37□□□□□ -0.91
CLPB-211ENST00000542555 CCDC96Q2M329 555 aa9.37□□□□□ -0.91
CLPB-211ENST00000542555 ADHFE1Q8IWW8 467 aa9.37□□□□□ -0.91
CLPB-211ENST00000542555 RGL4Q8IZJ4 473 aa9.37□□□□□ -0.91
CLPB-211ENST00000542555 MORC4Q8TE76 937 aa9.37□□□□□ -0.91
CLPB-211ENST00000542555 UTP4Q969X6 686 aaKnown RBP9.37□□□□□ -0.91
CLPB-211ENST00000542555 CHMP4CQ96CF2 233 aa9.37□□□□□ -0.91
CLPB-211ENST00000542555 VWCEQ96DN2 955 aa9.37□□□□□ -0.91
CLPB-211ENST00000542555 PABPC5Q96DU9 382 aaKnown RBP9.37□□□□□ -0.91
CLPB-211ENST00000542555 STRBPQ96SI9 672 aaKnown RBP9.37□□□□□ -0.91
CLPB-211ENST00000542555 KATNAL1Q9BW62 490 aa9.37□□□□□ -0.91
CLPB-211ENST00000542555 PUS7LQ9H0K6 701 aaKnown RBP9.37□□□□□ -0.91
CLPB-211ENST00000542555 CHMP4BQ9H444 224 aaKnown RBP9.37□□□□□ -0.91
CLPB-211ENST00000542555 STX8Q9UNK0 236 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms