RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 IGKV6-21A0A0C4DH24 114 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 SSBP05455 408 aaKnown RBP eCLIP19.05■□□□□ 0.64
LIG1-204ENST00000542460 CYP2C9P11712 490 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 SYKP43405 635 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 SLC12A3P55017 1021 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 UBE2HP62256 183 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 FAAP100Q0VG06 881 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 PTK7Q13308 1070 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 METTL13Q8N6R0 699 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 CTAGE1Q96RT6 745 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 GOLPH3LQ9H4A5 285 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 SMIM35A0A1B0GVV1 85 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 GAS2O43903 313 aaKnown RBP19.05■□□□□ 0.64
LIG1-204ENST00000542460 TMOD1P28289 359 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 DNM2P50570 870 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 MCM6Q14566 821 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 EFCAB12Q6NXP0 572 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 DNAH12Q6ZR08 3092 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 SV2BQ7L1I2 683 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 ZBTB10Q96DT7 871 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 SUGCTQ9HAC7 445 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 ATP6V0A4Q9HBG4 840 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 PDLIM7Q9NR12 457 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 KCND2Q9NZV8 630 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 USP25Q9UHP3 1055 aa19.05■□□□□ 0.64
LIG1-204ENST00000542460 WDR81Q562E7 1941 aa19.04■□□□□ 0.64
LIG1-204ENST00000542460 USO1O60763 962 aaKnown RBP19.04■□□□□ 0.64
LIG1-204ENST00000542460 RPLP2P05387 115 aaKnown RBP19.04■□□□□ 0.64
LIG1-204ENST00000542460 CYP11B2P19099 503 aa19.04■□□□□ 0.64
LIG1-204ENST00000542460 DHX8Q14562 1220 aaKnown RBP19.04■□□□□ 0.64
LIG1-204ENST00000542460 EMC2Q15006 297 aa19.04■□□□□ 0.64
LIG1-204ENST00000542460 RINT1Q6NUQ1 792 aa19.04■□□□□ 0.64
LIG1-204ENST00000542460 MCPH1Q8NEM0 835 aa19.04■□□□□ 0.64
LIG1-204ENST00000542460 MTRQ99707 1265 aa19.04■□□□□ 0.64
LIG1-204ENST00000542460 MAGEF1Q9HAY2 307 aa19.04■□□□□ 0.64
LIG1-204ENST00000542460 CLTBP09497 229 aa19.03■□□□□ 0.64
LIG1-204ENST00000542460 FAM160A1Q05DH4 1040 aa19.03■□□□□ 0.64
LIG1-204ENST00000542460 RUFY4Q6ZNE9 571 aa19.03■□□□□ 0.64
LIG1-204ENST00000542460 C1orf186Q6ZWK4 172 aa19.03■□□□□ 0.64
LIG1-204ENST00000542460 RPAINQ86UA6 219 aa19.03■□□□□ 0.64
LIG1-204ENST00000542460 RSPH3Q86UC2 560 aa19.03■□□□□ 0.64
LIG1-204ENST00000542460 KIAA0319LQ8IZA0 1049 aa19.03■□□□□ 0.64
LIG1-204ENST00000542460 NME8Q8N427 588 aa19.03■□□□□ 0.64
LIG1-204ENST00000542460 LRRC71Q8N4P6 559 aa19.03■□□□□ 0.64
LIG1-204ENST00000542460 LINC01465Q8N7H1 131 aa19.03■□□□□ 0.64
LIG1-204ENST00000542460 TCP11Q8WWU5 503 aa19.03■□□□□ 0.64
LIG1-204ENST00000542460 BMP2KQ9NSY1 1161 aaPredicted RBP19.03■□□□□ 0.64
LIG1-204ENST00000542460 LMBRD1Q9NUN5 540 aa19.03■□□□□ 0.64
LIG1-204ENST00000542460 ZNF202O95125 648 aa19.02■□□□□ 0.64
LIG1-204ENST00000542460 SLFN14P0C7P3 912 aa19.02■□□□□ 0.64
LIG1-204ENST00000542460 IER5Q5VY09 327 aa19.02■□□□□ 0.64
LIG1-204ENST00000542460 GPBP1Q86WP2 473 aa19.02■□□□□ 0.64
LIG1-204ENST00000542460 CEP57L1Q8IYX8 460 aa19.02■□□□□ 0.64
LIG1-204ENST00000542460 FMR1NBQ8N0W7 255 aaPredicted RBP19.02■□□□□ 0.64
LIG1-204ENST00000542460 CCDC155Q8N6L0 562 aa19.02■□□□□ 0.64
LIG1-204ENST00000542460 ENGASEQ8NFI3 743 aa19.02■□□□□ 0.64
LIG1-204ENST00000542460 DNAJB3Q8WWF6 145 aa19.02■□□□□ 0.64
LIG1-204ENST00000542460 MAP7D2Q96T17 732 aa19.02■□□□□ 0.64
LIG1-204ENST00000542460 RUSC1Q9BVN2 902 aa19.02■□□□□ 0.64
LIG1-204ENST00000542460 LRRC27Q9C0I9 530 aa19.02■□□□□ 0.64
LIG1-204ENST00000542460 FAM49AQ9H0Q0 323 aaPredicted RBP19.02■□□□□ 0.64
LIG1-204ENST00000542460 TNMDQ9H2S6 317 aa19.02■□□□□ 0.64
LIG1-204ENST00000542460 XPNPEP1Q9NQW7 623 aa19.02■□□□□ 0.64
LIG1-204ENST00000542460 TMEM39AQ9NV64 488 aa19.02■□□□□ 0.64
LIG1-204ENST00000542460 SERTAD1Q9UHV2 236 aa19.02■□□□□ 0.64
LIG1-204ENST00000542460 GUCY2CP25092 1073 aa19.01■□□□□ 0.63
LIG1-204ENST00000542460 CLCN3P51790 818 aa19.01■□□□□ 0.63
LIG1-204ENST00000542460 AMPD3Q01432 767 aa19.01■□□□□ 0.63
LIG1-204ENST00000542460 MKRN4PQ13434 485 aaPredicted RBP19.01■□□□□ 0.63
LIG1-204ENST00000542460 BFSP2Q13515 415 aa19.01■□□□□ 0.63
LIG1-204ENST00000542460 SNW1Q13573 536 aaKnown RBP19.01■□□□□ 0.63
LIG1-204ENST00000542460 LONRF3Q496Y0 759 aa19.01■□□□□ 0.63
LIG1-204ENST00000542460 CAGE1Q8TC20 777 aa19.01■□□□□ 0.63
LIG1-204ENST00000542460 DHX38Q92620 1227 aaKnown RBP19.01■□□□□ 0.63
LIG1-204ENST00000542460 TIPINQ9BVW5 301 aa19.01■□□□□ 0.63
LIG1-204ENST00000542460 KBTBD4Q9NVX7 518 aa19.01■□□□□ 0.63
LIG1-204ENST00000542460 ACTN4O43707 911 aaKnown RBP19■□□□□ 0.63
LIG1-204ENST00000542460 EVI5O60447 810 aa19■□□□□ 0.63
LIG1-204ENST00000542460 CAND2O75155 1236 aa19■□□□□ 0.63
LIG1-204ENST00000542460 TRIM71Q2Q1W2 868 aaKnown RBP19■□□□□ 0.63
LIG1-204ENST00000542460 ARSHQ5FYA8 562 aa19■□□□□ 0.63
LIG1-204ENST00000542460 MAEAQ7L5Y9 396 aa19■□□□□ 0.63
LIG1-204ENST00000542460 WNT8BQ93098 351 aa19■□□□□ 0.63
LIG1-204ENST00000542460 TMEM143Q96AN5 459 aa19■□□□□ 0.63
LIG1-204ENST00000542460 SUCLA2Q9P2R7 463 aaPredicted RBP19■□□□□ 0.63
LIG1-204ENST00000542460 TBX21Q9UL17 535 aa19■□□□□ 0.63
LIG1-204ENST00000542460 AKT3Q9Y243 479 aa19■□□□□ 0.63
LIG1-204ENST00000542460 KRT18P05783 430 aaKnown RBP19■□□□□ 0.63
LIG1-204ENST00000542460 LIG1P18858 919 aa19■□□□□ 0.63
LIG1-204ENST00000542460 THPOP40225 353 aa19■□□□□ 0.63
LIG1-204ENST00000542460 CDC42EP1Q00587 391 aa19■□□□□ 0.63
LIG1-204ENST00000542460 RBL2Q08999 1139 aa19■□□□□ 0.63
LIG1-204ENST00000542460 DRP2Q13474 957 aa19■□□□□ 0.63
LIG1-204ENST00000542460 FAM102BQ5T8I3 360 aa19■□□□□ 0.63
LIG1-204ENST00000542460 KRBA2Q6ZNG9 492 aa19■□□□□ 0.63
LIG1-204ENST00000542460 ZNF710Q8N1W2 664 aa19■□□□□ 0.63
LIG1-204ENST00000542460 CNNM3Q8NE01 707 aa19■□□□□ 0.63
LIG1-204ENST00000542460 PRPF31Q8WWY3 499 aaKnown RBP19■□□□□ 0.63
LIG1-204ENST00000542460 PSPC1Q8WXF1 523 aaKnown RBP19■□□□□ 0.63
LIG1-204ENST00000542460 DPF3Q92784 378 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms