RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 PURAQ00577 322 aaKnown RBP10.41□□□□□ -0.74
DDX55-208ENST00000541259 PNOCQ13519 176 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 KLHL40Q2TBA0 621 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 SKOR2Q2VWA4 1001 aaPredicted RBP10.41□□□□□ -0.74
DDX55-208ENST00000541259 BRDTQ58F21 947 aaPredicted RBP10.41□□□□□ -0.74
DDX55-208ENST00000541259 ARSHQ5FYA8 562 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 XKR9Q5GH70 373 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 XKR3Q5GH77 459 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 CAVIN1Q6NZI2 390 aaKnown RBP10.41□□□□□ -0.74
DDX55-208ENST00000541259 CXCL17Q6UXB2 119 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 SV2BQ7L1I2 683 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 CEP57L1Q8IYX8 460 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 ZNF454Q8N9F8 522 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 SYT2Q8N9I0 419 aaPredicted RBP10.41□□□□□ -0.74
DDX55-208ENST00000541259 ATP8B4Q8TF62 1192 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 TRAPPC12Q8WVT3 735 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 CEP89Q96ST8 783 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 BLZF1Q9H2G9 400 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 CLSTN2Q9H4D0 955 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 TUT1Q9H6E5 874 aaKnown RBP10.41□□□□□ -0.74
DDX55-208ENST00000541259 NRBP2Q9NSY0 501 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 ANKEF1Q9NU02 776 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 KBTBD4Q9NVX7 518 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 ERAP1Q9NZ08 941 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 STK17AQ9UEE5 414 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 SEPT9Q9UHD8 586 aaPredicted RBP10.41□□□□□ -0.74
DDX55-208ENST00000541259 USP25Q9UHP3 1055 aa10.41□□□□□ -0.74
DDX55-208ENST00000541259 DBR1Q9UK59 544 aaKnown RBP10.41□□□□□ -0.74
DDX55-208ENST00000541259 ZBTB42B2RXF5 422 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 HAS3O00219 553 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 CYP11B2P19099 503 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 CST5P28325 142 aaPredicted RBP10.4□□□□□ -0.74
DDX55-208ENST00000541259 RAD51AP2Q09MP3 1159 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 CUL4BQ13620 913 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 HIC1Q14526 733 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 KIAA0753Q2KHM9 967 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 MTERF2Q49AM1 385 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 RINT1Q6NUQ1 792 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 PADI6Q6TGC4 694 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 OTUD6AQ7L8S5 288 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 DYMQ7RTS9 669 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 RNF180Q86T96 592 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 GPBP1Q86WP2 473 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 ZBTB10Q96DT7 871 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 CEP170P1Q96L14 293 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 PYM1Q9BRP8 204 aaKnown RBP10.4□□□□□ -0.74
DDX55-208ENST00000541259 MTG1Q9BT17 334 aaPredicted RBP10.4□□□□□ -0.74
DDX55-208ENST00000541259 RUSC1Q9BVN2 902 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 NIFKQ9BYG3 293 aaKnown RBP10.4□□□□□ -0.74
DDX55-208ENST00000541259 NUP62CLQ9H1M0 184 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 CUEDC2Q9H467 287 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 CYP26B1Q9NR63 512 aa10.4□□□□□ -0.74
DDX55-208ENST00000541259 DNAH12Q6ZR08 3092 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 ARHGEF35A5YM69 484 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 MAP3K7O43318 606 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 ZEB2O60315 1214 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 HBP1O60381 514 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 KPNA6O60684 536 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 F2P00734 622 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 INSRRP14616 1297 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 SLC26A2P50443 739 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 ACLYP53396 1101 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 SOX10P56693 466 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 IGBP1P78318 339 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 POSTNQ15063 836 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 TARBP2Q15633 366 aaKnown RBP10.39□□□□□ -0.75
DDX55-208ENST00000541259 NBPF20Q3BBV1 942 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 C1orf186Q6ZWK4 172 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 MAEAQ7L5Y9 396 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 KCTD17Q8N5Z5 321 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 ARRDC4Q8NCT1 418 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 FAM167AQ96KS9 214 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 C7orf25Q9BPX7 421 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 TNMDQ9H2S6 317 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 ZNF215Q9UL58 517 aaPredicted RBP10.39□□□□□ -0.75
DDX55-208ENST00000541259 OGDHLQ9ULD0 1010 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 PCDHGA10Q9Y5H3 936 aa10.39□□□□□ -0.75
DDX55-208ENST00000541259 GRIN2DO15399 1336 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 RSPH10B2B2RC85 870 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 USO1O60763 962 aaKnown RBP10.38□□□□□ -0.75
DDX55-208ENST00000541259 SGPL1O95470 568 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 TFRCP02786 760 aaKnown RBP10.38□□□□□ -0.75
DDX55-208ENST00000541259 GJB1P08034 283 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 RSPH10BP0C881 870 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 SMIM10L2AP0DMW4 78 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 SMIM10L2BP0DMW5 78 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 ZNF200P98182 395 aaPredicted RBP10.38□□□□□ -0.75
DDX55-208ENST00000541259 DPYDQ12882 1025 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 GIT2Q14161 759 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 MARCH8Q5T0T0 291 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 CCDC183Q5T5S1 534 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 KANK3Q6NY19 840 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 ELOA2Q8IYF1 753 aaPredicted RBP10.38□□□□□ -0.75
DDX55-208ENST00000541259 PCSK9Q8NBP7 692 aaKnown RBP10.38□□□□□ -0.75
DDX55-208ENST00000541259 U2AF1L4Q8WU68 220 aaKnown RBP10.38□□□□□ -0.75
DDX55-208ENST00000541259 DNAJC19Q96DA6 116 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 CCDC43Q96MW1 224 aaKnown RBP10.38□□□□□ -0.75
DDX55-208ENST00000541259 TSEN34Q9BSV6 310 aaKnown RBP10.38□□□□□ -0.75
DDX55-208ENST00000541259 TRIM9Q9C026 710 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 MAGEF1Q9HAY2 307 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms