RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 DNM1Q05193 864 aaKnown RBP20.92■□□□□ 0.94
VPS33A-205ENST00000541169 PSRC1Q6PGN9 363 aaPredicted RBP20.92■□□□□ 0.94
VPS33A-205ENST00000541169 POTEGQ6S5H5 508 aa20.92■□□□□ 0.94
VPS33A-205ENST00000541169 LINC01465Q8N7H1 131 aa20.92■□□□□ 0.94
VPS33A-205ENST00000541169 RASSF8Q8NHQ8 419 aa20.92■□□□□ 0.94
VPS33A-205ENST00000541169 MMTAG2Q9BU76 263 aaKnown RBP20.92■□□□□ 0.94
VPS33A-205ENST00000541169 WNT8AQ9H1J5 351 aa20.92■□□□□ 0.94
VPS33A-205ENST00000541169 MTIF3Q9H2K0 278 aaKnown RBP20.92■□□□□ 0.94
VPS33A-205ENST00000541169 SUGCTQ9HAC7 445 aa20.92■□□□□ 0.94
VPS33A-205ENST00000541169 DDX19AQ9NUU7 478 aaKnown RBP20.92■□□□□ 0.94
VPS33A-205ENST00000541169 KCND2Q9NZV8 630 aa20.92■□□□□ 0.94
VPS33A-205ENST00000541169 RBM19Q9Y4C8 960 aaKnown RBP20.92■□□□□ 0.94
VPS33A-205ENST00000541169 ARHGEF35A5YM69 484 aa20.91■□□□□ 0.94
VPS33A-205ENST00000541169 EYA4O95677 639 aa20.91■□□□□ 0.94
VPS33A-205ENST00000541169 ACTN1P12814 892 aa20.91■□□□□ 0.94
VPS33A-205ENST00000541169 CSF2RAP15509 400 aa20.91■□□□□ 0.94
VPS33A-205ENST00000541169 CCL23P55773 120 aa20.91■□□□□ 0.94
VPS33A-205ENST00000541169 MDM2Q00987 491 aaPredicted RBP20.91■□□□□ 0.94
VPS33A-205ENST00000541169 MXD4Q14582 209 aaPredicted RBP20.91■□□□□ 0.94
VPS33A-205ENST00000541169 PLA2G4FQ68DD2 849 aa20.91■□□□□ 0.94
VPS33A-205ENST00000541169 MTRQ99707 1265 aa20.91■□□□□ 0.94
VPS33A-205ENST00000541169 TIPINQ9BVW5 301 aa20.91■□□□□ 0.94
VPS33A-205ENST00000541169 CELF4Q9BZC1 486 aaKnown RBP20.91■□□□□ 0.94
VPS33A-205ENST00000541169 UBE2OQ9C0C9 1292 aaKnown RBP20.91■□□□□ 0.94
VPS33A-205ENST00000541169 FAM49AQ9H0Q0 323 aaPredicted RBP20.91■□□□□ 0.94
VPS33A-205ENST00000541169 CSRNP2Q9H175 543 aa20.91■□□□□ 0.94
VPS33A-205ENST00000541169 ATP6V0A4Q9HBG4 840 aa20.91■□□□□ 0.94
VPS33A-205ENST00000541169 TRPV2Q9Y5S1 764 aa20.91■□□□□ 0.94
VPS33A-205ENST00000541169 ARID2Q68CP9 1835 aa20.9■□□□□ 0.94
VPS33A-205ENST00000541169 EFCAB14O75071 495 aa20.9■□□□□ 0.94
VPS33A-205ENST00000541169 CXCL10P02778 98 aa20.9■□□□□ 0.94
VPS33A-205ENST00000541169 NPEPPSP55786 919 aa20.9■□□□□ 0.94
VPS33A-205ENST00000541169 PIGOQ8TEQ8 1089 aa20.9■□□□□ 0.94
VPS33A-205ENST00000541169 PSPC1Q8WXF1 523 aaKnown RBP20.9■□□□□ 0.94
VPS33A-205ENST00000541169 APBB2Q92870 758 aa20.9■□□□□ 0.94
VPS33A-205ENST00000541169 WNT8BQ93098 351 aa20.9■□□□□ 0.94
VPS33A-205ENST00000541169 PYM1Q9BRP8 204 aaKnown RBP20.9■□□□□ 0.94
VPS33A-205ENST00000541169 CHMP5Q9NZZ3 219 aa20.9■□□□□ 0.94
VPS33A-205ENST00000541169 KCNG1Q9UIX4 513 aa20.9■□□□□ 0.94
VPS33A-205ENST00000541169 AKT3Q9Y243 479 aa20.9■□□□□ 0.94
VPS33A-205ENST00000541169 EVPLQ92817 2033 aa20.89■□□□□ 0.93
VPS33A-205ENST00000541169 UMODL1Q5DID0 1318 aa20.89■□□□□ 0.93
VPS33A-205ENST00000541169 PP2D1A8MPX8 630 aa20.89■□□□□ 0.93
VPS33A-205ENST00000541169 NCLP19338 710 aaKnown RBP20.89■□□□□ 0.93
VPS33A-205ENST00000541169 CDC25AP30304 524 aa20.89■□□□□ 0.93
VPS33A-205ENST00000541169 ME1P48163 572 aa20.89■□□□□ 0.93
VPS33A-205ENST00000541169 CRYBB1P53674 252 aaPredicted RBP20.89■□□□□ 0.93
VPS33A-205ENST00000541169 EMC2Q15006 297 aa20.89■□□□□ 0.93
VPS33A-205ENST00000541169 TRAF7Q6Q0C0 670 aa20.89■□□□□ 0.93
VPS33A-205ENST00000541169 ZNF410Q86VK4 478 aa20.89■□□□□ 0.93
VPS33A-205ENST00000541169 SPATA32Q96LK8 384 aa20.89■□□□□ 0.93
VPS33A-205ENST00000541169 IPO9Q96P70 1041 aaKnown RBP20.89■□□□□ 0.93
VPS33A-205ENST00000541169 INO80BQ9C086 356 aaPredicted RBP20.89■□□□□ 0.93
VPS33A-205ENST00000541169 STK17AQ9UEE5 414 aa20.89■□□□□ 0.93
VPS33A-205ENST00000541169 TMEM150BA6NC51 233 aa20.88■□□□□ 0.93
VPS33A-205ENST00000541169 BAIAP3O94812 1187 aa20.88■□□□□ 0.93
VPS33A-205ENST00000541169 FGBP02675 491 aa20.88■□□□□ 0.93
VPS33A-205ENST00000541169 CHRNA1P02708 482 aa20.88■□□□□ 0.93
VPS33A-205ENST00000541169 CLCN3P51790 818 aa20.88■□□□□ 0.93
VPS33A-205ENST00000541169 POU5F1BQ06416 359 aa20.88■□□□□ 0.93
VPS33A-205ENST00000541169 MGAT3Q09327 533 aa20.88■□□□□ 0.93
VPS33A-205ENST00000541169 TMEM119Q4V9L6 283 aa20.88■□□□□ 0.93
VPS33A-205ENST00000541169 PADI6Q6TGC4 694 aa20.88■□□□□ 0.93
VPS33A-205ENST00000541169 CCDC73Q6ZRK6 1079 aa20.88■□□□□ 0.93
VPS33A-205ENST00000541169 SYMPKQ92797 1274 aaKnown RBP20.88■□□□□ 0.93
VPS33A-205ENST00000541169 SCLYQ96I15 445 aa20.88■□□□□ 0.93
VPS33A-205ENST00000541169 BHMT2Q9H2M3 363 aa20.88■□□□□ 0.93
VPS33A-205ENST00000541169 TSHZ2Q9NRE2 1034 aa20.88■□□□□ 0.93
VPS33A-205ENST00000541169 SUCLA2Q9P2R7 463 aaPredicted RBP20.88■□□□□ 0.93
VPS33A-205ENST00000541169 CDY2AQ9Y6F7 541 aa20.88■□□□□ 0.93
VPS33A-205ENST00000541169 ZBTB39O15060 712 aa20.87■□□□□ 0.93
VPS33A-205ENST00000541169 CYP11B2P19099 503 aa20.87■□□□□ 0.93
VPS33A-205ENST00000541169 GRB10Q13322 594 aa20.87■□□□□ 0.93
VPS33A-205ENST00000541169 TFDP1Q14186 410 aa20.87■□□□□ 0.93
VPS33A-205ENST00000541169 PCBP1Q15365 356 aaKnown RBP eCLIP20.87■□□□□ 0.93
VPS33A-205ENST00000541169 ZRSR1Q15695 479 aaKnown RBP20.87■□□□□ 0.93
VPS33A-205ENST00000541169 CSPP1Q1MSJ5 1256 aa20.87■□□□□ 0.93
VPS33A-205ENST00000541169 FOXD4L6Q3SYB3 417 aaPredicted RBP20.87■□□□□ 0.93
VPS33A-205ENST00000541169 CNKSR3Q6P9H4 555 aa20.87■□□□□ 0.93
VPS33A-205ENST00000541169 FOXD4L3Q6VB84 417 aaPredicted RBP20.87■□□□□ 0.93
VPS33A-205ENST00000541169 TSHZ1Q6ZSZ6 1077 aa20.87■□□□□ 0.93
VPS33A-205ENST00000541169 LRRC71Q8N4P6 559 aa20.87■□□□□ 0.93
VPS33A-205ENST00000541169 SEPT8Q92599 483 aa20.87■□□□□ 0.93
VPS33A-205ENST00000541169 CEP290O15078 2479 aa20.86■□□□□ 0.93
VPS33A-205ENST00000541169 ABHD14A-ACY1A0A1B0GW23 586 aa20.86■□□□□ 0.93
VPS33A-205ENST00000541169 CTSHP09668 335 aa20.86■□□□□ 0.93
VPS33A-205ENST00000541169 ECM1Q16610 540 aa20.86■□□□□ 0.93
VPS33A-205ENST00000541169 FBXO47Q5MNV8 452 aa20.86■□□□□ 0.93
VPS33A-205ENST00000541169 ADALQ6DHV7 355 aa20.86■□□□□ 0.93
VPS33A-205ENST00000541169 SYT2Q8N9I0 419 aaPredicted RBP20.86■□□□□ 0.93
VPS33A-205ENST00000541169 LEO1Q8WVC0 666 aaPredicted RBP20.86■□□□□ 0.93
VPS33A-205ENST00000541169 KIFAP3Q92845 792 aa20.86■□□□□ 0.93
VPS33A-205ENST00000541169 PNMA5Q96PV4 448 aa20.86■□□□□ 0.93
VPS33A-205ENST00000541169 CUEDC2Q9H467 287 aa20.86■□□□□ 0.93
VPS33A-205ENST00000541169 FAM13BQ9NYF5 915 aa20.86■□□□□ 0.93
VPS33A-205ENST00000541169 GPR182O15218 404 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 NBNO60934 754 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 GPR32O75388 356 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 GPC3P51654 580 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 NLRP11P59045 1033 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms