RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 B8ZZF3 427 aa8.64□□□□□ -1.03
YBX3-210ENST00000540975 CNOT4O95628 575 aaKnown RBP8.64□□□□□ -1.03
YBX3-210ENST00000540975 HMGCRP04035 888 aa8.64□□□□□ -1.03
YBX3-210ENST00000540975 MASP1P48740 699 aa8.64□□□□□ -1.03
YBX3-210ENST00000540975 LIMS2Q7Z4I7 341 aa8.64□□□□□ -1.03
YBX3-210ENST00000540975 THNSL2Q86YJ6 484 aa8.64□□□□□ -1.03
YBX3-210ENST00000540975 ZZZ3Q8IYH5 903 aa8.64□□□□□ -1.03
YBX3-210ENST00000540975 BCL6BQ8N143 479 aaPredicted RBP8.64□□□□□ -1.03
YBX3-210ENST00000540975 RTF1Q92541 710 aaKnown RBP8.64□□□□□ -1.03
YBX3-210ENST00000540975 ZMAT4Q9H898 229 aa8.64□□□□□ -1.03
YBX3-210ENST00000540975 JADE2Q9NQC1 790 aa8.64□□□□□ -1.03
YBX3-210ENST00000540975 SPTLC3Q9NUV7 552 aa8.64□□□□□ -1.03
YBX3-210ENST00000540975 FKBP9O95302 570 aa8.63□□□□□ -1.03
YBX3-210ENST00000540975 ADCYAP1R1P41586 468 aa8.63□□□□□ -1.03
YBX3-210ENST00000540975 RRADP55042 308 aa8.63□□□□□ -1.03
YBX3-210ENST00000540975 OCRLQ01968 901 aa8.63□□□□□ -1.03
YBX3-210ENST00000540975 LRRC32Q14392 662 aa8.63□□□□□ -1.03
YBX3-210ENST00000540975 NOLC1Q14978 699 aaKnown RBP eCLIP8.63□□□□□ -1.03
YBX3-210ENST00000540975 ZNF827Q17R98 1081 aa8.63□□□□□ -1.03
YBX3-210ENST00000540975 EGFLAMQ63HQ2 1017 aa8.63□□□□□ -1.03
YBX3-210ENST00000540975 GLB1LQ6UWU2 654 aa8.63□□□□□ -1.03
YBX3-210ENST00000540975 FKBP9P1Q75LS8 142 aa8.63□□□□□ -1.03
YBX3-210ENST00000540975 RNF180Q86T96 592 aa8.63□□□□□ -1.03
YBX3-210ENST00000540975 NPEPPSL1A6NEC2 478 aa8.62□□□□□ -1.03
YBX3-210ENST00000540975 PRRG2O14669 202 aa8.62□□□□□ -1.03
YBX3-210ENST00000540975 LSSP48449 732 aa8.62□□□□□ -1.03
YBX3-210ENST00000540975 IL2P60568 153 aa8.62□□□□□ -1.03
YBX3-210ENST00000540975 MAP3K12Q12852 859 aa8.62□□□□□ -1.03
YBX3-210ENST00000540975 PCOLCEQ15113 449 aa8.62□□□□□ -1.03
YBX3-210ENST00000540975 ZMAT1Q5H9K5 638 aa8.62□□□□□ -1.03
YBX3-210ENST00000540975 SLFN13Q68D06 897 aa8.62□□□□□ -1.03
YBX3-210ENST00000540975 DDX46Q7L014 1031 aaKnown RBP8.62□□□□□ -1.03
YBX3-210ENST00000540975 PHYKPLQ8IUZ5 450 aa8.62□□□□□ -1.03
YBX3-210ENST00000540975 UBR7Q8N806 425 aa8.62□□□□□ -1.03
YBX3-210ENST00000540975 SEC61A2Q9H9S3 476 aa8.62□□□□□ -1.03
YBX3-210ENST00000540975 CNOT11Q9UKZ1 510 aaKnown RBP8.62□□□□□ -1.03
YBX3-210ENST00000540975 K7ESM1 405 aa8.61□□□□□ -1.03
YBX3-210ENST00000540975 ANTXR2P58335 489 aa8.61□□□□□ -1.03
YBX3-210ENST00000540975 MYBPC3Q14896 1274 aa8.61□□□□□ -1.03
YBX3-210ENST00000540975 DHCR24Q15392 516 aa8.61□□□□□ -1.03
YBX3-210ENST00000540975 PRAMEF9Q5VWM5 478 aa8.61□□□□□ -1.03
YBX3-210ENST00000540975 TIGD7Q6NT04 549 aaPredicted RBP8.61□□□□□ -1.03
YBX3-210ENST00000540975 FILIP1Q7Z7B0 1213 aa8.61□□□□□ -1.03
YBX3-210ENST00000540975 MAGEL2Q9UJ55 1249 aa8.61□□□□□ -1.03
YBX3-210ENST00000540975 PRPF6O94906 941 aaKnown RBP8.6□□□□□ -1.03
YBX3-210ENST00000540975 CD40P25942 277 aa8.6□□□□□ -1.03
YBX3-210ENST00000540975 STAT3P40763 770 aa8.6□□□□□ -1.03
YBX3-210ENST00000540975 MRE11P49959 708 aa8.6□□□□□ -1.03
YBX3-210ENST00000540975 STAT5BP51692 787 aa8.6□□□□□ -1.03
YBX3-210ENST00000540975 TBR1Q16650 682 aa8.6□□□□□ -1.03
YBX3-210ENST00000540975 RNF151Q2KHN1 245 aa8.6□□□□□ -1.03
YBX3-210ENST00000540975 KANSL1Q7Z3B3 1105 aa8.6□□□□□ -1.03
YBX3-210ENST00000540975 C7orf31Q8N865 590 aa8.6□□□□□ -1.03
YBX3-210ENST00000540975 ZNF496Q96IT1 587 aaPredicted RBP8.6□□□□□ -1.03
YBX3-210ENST00000540975 KIAA1683Q9H0B3 1180 aa8.6□□□□□ -1.03
YBX3-210ENST00000540975 CAAP1Q9H8G2 361 aa8.6□□□□□ -1.03
YBX3-210ENST00000540975 KCMF1Q9P0J7 381 aa8.6□□□□□ -1.03
YBX3-210ENST00000540975 NCANO14594 1321 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 GPR42O15529 346 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 BPIP17213 487 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 LSP1P33241 339 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 MEOX1P50221 254 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 BCAR1P56945 870 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 ADCY2Q08462 1091 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 GPR158Q5T848 1215 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 USP30Q70CQ3 517 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 STRA8Q7Z7C7 330 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 C11orf74Q86VG3 221 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 RTKN2Q8IZC4 609 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 LMF1Q96S06 567 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 MYL10Q9BUA6 226 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 MEGF9Q9H1U4 602 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 SEMA4AQ9H3S1 761 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 POFUT1Q9H488 388 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 EMC7Q9NPA0 242 aa8.59□□□□□ -1.03
YBX3-210ENST00000540975 SAE1Q9UBE0 346 aaPredicted RBP8.59□□□□□ -1.03
YBX3-210ENST00000540975 APOL3O95236 402 aa8.58□□□□□ -1.04
YBX3-210ENST00000540975 RAC3P60763 192 aa8.58□□□□□ -1.04
YBX3-210ENST00000540975 PHC1P78364 1004 aa8.58□□□□□ -1.04
YBX3-210ENST00000540975 TERF2Q15554 542 aa8.58□□□□□ -1.04
YBX3-210ENST00000540975 DGKDQ16760 1214 aa8.58□□□□□ -1.04
YBX3-210ENST00000540975 ZNF568Q3ZCX4 644 aa8.58□□□□□ -1.04
YBX3-210ENST00000540975 AGBL4Q5VU57 503 aa8.58□□□□□ -1.04
YBX3-210ENST00000540975 UNQ6494/PRO21346Q6UXR6 183 aa8.58□□□□□ -1.04
YBX3-210ENST00000540975 ZNF610Q8N9Z0 462 aa8.58□□□□□ -1.04
YBX3-210ENST00000540975 RPGRQ92834 1020 aaKnown RBP8.58□□□□□ -1.04
YBX3-210ENST00000540975 USP7Q93009 1102 aa8.58□□□□□ -1.04
YBX3-210ENST00000540975 NEIL1Q96FI4 390 aaPredicted RBP8.58□□□□□ -1.04
YBX3-210ENST00000540975 OR10A2Q9H208 303 aa8.58□□□□□ -1.04
YBX3-210ENST00000540975 VWA7Q9Y334 891 aa8.58□□□□□ -1.04
YBX3-210ENST00000540975 CADPSQ9ULU8 1353 aa8.58□□□□□ -1.04
YBX3-210ENST00000540975 ARHGAP6O43182 974 aa8.57□□□□□ -1.04
YBX3-210ENST00000540975 NFYCQ13952 458 aa8.57□□□□□ -1.04
YBX3-210ENST00000540975 KIAA1841Q6NSI8 718 aa8.57□□□□□ -1.04
YBX3-210ENST00000540975 CHAC2Q8WUX2 184 aa8.57□□□□□ -1.04
YBX3-210ENST00000540975 SAMD11Q96NU1 681 aa8.57□□□□□ -1.04
YBX3-210ENST00000540975 LRRC37BQ96QE4 947 aa8.57□□□□□ -1.04
YBX3-210ENST00000540975 IFT22Q9H7X7 185 aa8.57□□□□□ -1.04
YBX3-210ENST00000540975 MSRAQ9UJ68 235 aa8.57□□□□□ -1.04
YBX3-210ENST00000540975 NR2E1Q9Y466 385 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms