RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 GJD2Q9UKL4 321 aa15.76■□□□□ 0.11
CYB561A3-216ENST00000540755 COLQQ9Y215 455 aaPredicted RBP15.76■□□□□ 0.11
CYB561A3-216ENST00000540755 SZT2Q5T011 3432 aa15.76■□□□□ 0.11
CYB561A3-216ENST00000540755 CBFA2T2O43439 604 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 SGPL1O95470 568 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 SERPINC1P01008 464 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 CDK11BP21127 795 aaKnown RBP15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 FXR1P51114 621 aaKnown RBP eCLIP15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 LRRC63Q05C16 580 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 SPAG1Q07617 926 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 MAPK7Q13164 816 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 XKR9Q5GH70 373 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 UTP14CQ5TAP6 766 aaKnown RBP15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 FAM160B1Q5W0V3 765 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 PLA2G4FQ68DD2 849 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 ANKRD40Q6AI12 368 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 EPM2AIP1Q7L775 607 aaPredicted RBP15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 DHX37Q8IY37 1157 aaKnown RBP15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 GLIS3Q8NEA6 775 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 SOCS4Q8WXH5 440 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 GPR20Q99678 358 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 FGFBP2Q9BYJ0 223 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 SEMA6BQ9H3T3 888 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 ABHD16BQ9H3Z7 469 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 THAP9Q9H5L6 903 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 TBC1D7Q9P0N9 293 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 IFNKQ9P0W0 207 aa15.75■□□□□ 0.11
CYB561A3-216ENST00000540755 LAMA3Q16787 3333 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 TMEM150BA6NC51 233 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 USO1O60763 962 aaKnown RBP15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 HIP1RO75146 1068 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 LGR5O75473 907 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 OATP04181 439 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 ATP4AP20648 1035 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 TCF7P36402 384 aaPredicted RBP15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 RGS2P41220 211 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 UBASH3AP57075 661 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 LRRC41Q15345 812 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 BMT2Q1RMZ1 405 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 MYCT1Q8N699 235 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 SCFD1Q8WVM8 642 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 EMID1Q96A84 441 aaPredicted RBP15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 CEP170P1Q96L14 293 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 DRC1Q96MC2 740 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 DEFB118Q96PH6 123 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 PCYT2Q99447 389 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 DUSP9Q99956 384 aaKnown RBP15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 XPO4Q9C0E2 1151 aaKnown RBP15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 CRISPLD2Q9H0B8 497 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 SEPT9Q9UHD8 586 aaPredicted RBP15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 ALPK3Q96L96 1907 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 UBE4BO95155 1302 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 EMSYQ7Z589 1322 aa15.74■□□□□ 0.11
CYB561A3-216ENST00000540755 NOP56O00567 594 aaKnown RBP15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 EIF3DO15371 548 aaKnown RBP eCLIP15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 DGAT1O75907 488 aa15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 TPM3P06753 285 aa15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 MAPTP10636 758 aaKnown RBP15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 STAT5BP51692 787 aa15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 NPEPPSP55786 919 aa15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 TRIM32Q13049 653 aa15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 LAMC2Q13753 1193 aa15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 HSDL1Q3SXM5 330 aa15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 ZCWPW2Q504Y3 356 aa15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 DAW1Q8N136 415 aa15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 ZNF507Q8TCN5 953 aa15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 SPATA33Q96N06 139 aa15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 CTAGE1Q96RT6 745 aa15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 FIZ1Q96SL8 496 aa15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 TSG101Q99816 390 aa15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 NIFKQ9BYG3 293 aaKnown RBP15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 MRPL44Q9H9J2 332 aaKnown RBP15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 CYP26B1Q9NR63 512 aa15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 LIMA1Q9UHB6 759 aaKnown RBP15.73■□□□□ 0.11
CYB561A3-216ENST00000540755 NKRFO15226 690 aaKnown RBP eCLIP15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 GH1P01241 217 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 HMGCRP04035 888 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 EEF1GP26641 437 aaKnown RBP15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 CASP5P51878 434 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 ARHGAP1Q07960 439 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 ACVR2BQ13705 512 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 HSP90AA4PQ58FG1 418 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 OLFML2BQ68BL8 750 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 PPP4R3CPQ6ZMV5 832 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 STXBP4Q6ZWJ1 553 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 PLPPR4Q7Z2D5 763 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 CSGALNACT2Q8N6G5 542 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 ANKRD20A12PQ8NF67 263 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 TRIB2Q92519 343 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 COPS5Q92905 334 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 FAM167AQ96KS9 214 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 APBA2Q99767 749 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 SRRTQ9BXP5 876 aaKnown RBP15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 KCTD10Q9H3F6 313 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 AZI2Q9H6S1 392 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 PDLIM7Q9NR12 457 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 LARSQ9P2J5 1176 aaKnown RBP15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 PPME1Q9Y570 386 aa15.72■□□□□ 0.11
CYB561A3-216ENST00000540755 LRRC10BA6NIK2 292 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms