RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 HOXB8P17481 243 aaPredicted RBP8.33□□□□□ -1.08
YBX3-209ENST00000540747 LAG3P18627 525 aa8.33□□□□□ -1.08
YBX3-209ENST00000540747 MCM5P33992 734 aa8.33□□□□□ -1.08
YBX3-209ENST00000540747 CRYBB1P53674 252 aaPredicted RBP8.33□□□□□ -1.08
YBX3-209ENST00000540747 APOBRQ0VD83 1088 aa8.33□□□□□ -1.08
YBX3-209ENST00000540747 NFX1Q12986 1120 aaKnown RBP8.33□□□□□ -1.08
YBX3-209ENST00000540747 ZNF484Q5JVG2 852 aa8.33□□□□□ -1.08
YBX3-209ENST00000540747 CASC1Q6TDU7 716 aa8.33□□□□□ -1.08
YBX3-209ENST00000540747 HEATR3Q7Z4Q2 680 aa8.33□□□□□ -1.08
YBX3-209ENST00000540747 THNSL1Q8IYQ7 743 aa8.33□□□□□ -1.08
YBX3-209ENST00000540747 PGBD1Q96JS3 809 aa8.33□□□□□ -1.08
YBX3-209ENST00000540747 SDF4Q9BRK5 362 aa8.33□□□□□ -1.08
YBX3-209ENST00000540747 ANO3Q9BYT9 981 aa8.33□□□□□ -1.08
YBX3-209ENST00000540747 TMEM117Q9H0C3 514 aa8.33□□□□□ -1.08
YBX3-209ENST00000540747 NGRNQ9NPE2 291 aaKnown RBP8.33□□□□□ -1.08
YBX3-209ENST00000540747 AAASQ9NRG9 546 aa8.33□□□□□ -1.08
YBX3-209ENST00000540747 FAM86C1Q9NVL1 165 aa8.33□□□□□ -1.08
YBX3-209ENST00000540747 TMEM260Q9NX78 707 aa8.33□□□□□ -1.08
YBX3-209ENST00000540747 CDH22Q9UJ99 828 aa8.33□□□□□ -1.08
YBX3-209ENST00000540747 LRFN2Q9ULH4 789 aa8.33□□□□□ -1.08
YBX3-209ENST00000540747 MAFBQ9Y5Q3 323 aaPredicted RBP8.33□□□□□ -1.08
YBX3-209ENST00000540747 DENND3A2RUS2 1198 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 CCDC69A6NI79 296 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 FAM86B1E9PN63 330 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 SLC27A2O14975 620 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 GPR182O15218 404 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 GALR2O43603 387 aaPredicted RBP8.32□□□□□ -1.08
YBX3-209ENST00000540747 CYP3A4P08684 503 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 FAM86B2P0C5J1 330 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 TECP42680 631 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 AP3B2Q13367 1082 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 NECTIN1Q15223 517 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 KIZQ2M2Z5 673 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 CLLU1OSQ5K130 101 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 ODR4Q5SWX8 454 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 PLPP4Q5VZY2 271 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 APOA5Q6Q788 366 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 KCNT2Q6UVM3 1135 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 ZNF598Q86UK7 904 aaKnown RBP8.32□□□□□ -1.08
YBX3-209ENST00000540747 RAB11FIP4Q86YS3 637 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 RIPOR3Q96MK2 946 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 OSMRQ99650 979 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 TCF25Q9BQ70 676 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 IRF2BPLQ9H1B7 796 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 ADAMTS10Q9H324 1103 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 ATP6V0A4Q9HBG4 840 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 FAM217BQ9NTX9 383 aaPredicted RBP8.32□□□□□ -1.08
YBX3-209ENST00000540747 RNF216Q9NWF9 866 aaPredicted RBP8.32□□□□□ -1.08
YBX3-209ENST00000540747 NCOR2Q9Y618 2525 aa8.32□□□□□ -1.08
YBX3-209ENST00000540747 C2orf71A6NGG8 1288 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 C2CD4DB7Z1M9 353 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 hCG_1984214I3L0E3 225 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 ADAMTS3O15072 1205 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 BRD1O95696 1058 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 VTNP04004 478 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 SRGAP2BP0DMP2 458 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 PPM1AP35813 382 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 PBX3P40426 434 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 NBL1P41271 181 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 ADCY7P51828 1080 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 FAM160B1Q5W0V3 765 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 CREB3L3Q68CJ9 461 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 PDXDC2PQ6P474 469 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 NFXL1Q6ZNB6 911 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 ASCL5Q7RTU5 278 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 MICU3Q86XE3 530 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 ECHDC2Q86YB7 292 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 UBALD2Q8IYN6 164 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 SLC39A11Q8N1S5 342 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 LRRC43Q8N309 656 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 CCDC82Q8N4S0 544 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 ZNF713Q8N859 430 aaPredicted RBP8.31□□□□□ -1.08
YBX3-209ENST00000540747 TMEM105Q8N8V8 129 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 MRPL43Q8N983 215 aaKnown RBP8.31□□□□□ -1.08
YBX3-209ENST00000540747 KREMEN2Q8NCW0 462 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 MICAL1Q8TDZ2 1067 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 BBXQ8WY36 941 aaPredicted RBP8.31□□□□□ -1.08
YBX3-209ENST00000540747 CASP10Q92851 521 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 LRRC2Q9BYS8 371 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 ADAM7Q9H2U9 754 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 POMKQ9H5K3 350 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 ZNF302Q9NR11 478 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 BARHL2Q9NY43 387 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 SORCS3Q9UPU3 1222 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 GINS2Q9Y248 185 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 HCFC2Q9Y5Z7 792 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 SLC12A7Q9Y666 1083 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 CEP250Q9BV73 2442 aa8.31□□□□□ -1.08
YBX3-209ENST00000540747 EVPLQ92817 2033 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 MYO10Q9HD67 2058 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 PRR23AA6NEV1 266 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 IPO5O00410 1097 aaKnown RBP8.3□□□□□ -1.08
YBX3-209ENST00000540747 BACH1O14867 736 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 HOXA2O43364 376 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 EDIL3O43854 480 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 ZNF862O60290 1169 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 CLASP2O75122 1294 aaKnown RBP8.3□□□□□ -1.08
YBX3-209ENST00000540747 CLCN3P51790 818 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 NAPAP54920 295 aa8.3□□□□□ -1.08
YBX3-209ENST00000540747 EXOSC10Q01780 885 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms