RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 NPM2Q86SE8 214 aaKnown RBP5.39□□□□□ -1.55
MDM2-227ENST00000540709 TMEM176AQ96HP8 235 aa5.39□□□□□ -1.55
MDM2-227ENST00000540709 PLA2G12BQ9BX93 195 aa5.39□□□□□ -1.55
MDM2-227ENST00000540709 OR10A2Q9H208 303 aa5.39□□□□□ -1.55
MDM2-227ENST00000540709 PIF1Q9H611 641 aa5.39□□□□□ -1.55
MDM2-227ENST00000540709 TRAF5O00463 557 aa5.38□□□□□ -1.55
MDM2-227ENST00000540709 APOL3O95236 402 aa5.38□□□□□ -1.55
MDM2-227ENST00000540709 SLC9A1P19634 815 aa5.38□□□□□ -1.55
MDM2-227ENST00000540709 COMTP21964 271 aa5.38□□□□□ -1.55
MDM2-227ENST00000540709 RGS3P49796 1198 aa5.38□□□□□ -1.55
MDM2-227ENST00000540709 NEK4P51957 841 aa5.38□□□□□ -1.55
MDM2-227ENST00000540709 ALDH6A1Q02252 535 aaKnown RBP5.38□□□□□ -1.55
MDM2-227ENST00000540709 PABPC4Q13310 644 aaKnown RBP eCLIP5.38□□□□□ -1.55
MDM2-227ENST00000540709 ADAM15Q13444 863 aa5.38□□□□□ -1.55
MDM2-227ENST00000540709 ACAP1Q15027 740 aa5.38□□□□□ -1.55
MDM2-227ENST00000540709 NRN1LQ496H8 165 aa5.38□□□□□ -1.55
MDM2-227ENST00000540709 PRAMEF9Q5VWM5 478 aa5.38□□□□□ -1.55
MDM2-227ENST00000540709 KIAA1958Q8N8K9 716 aa5.38□□□□□ -1.55
MDM2-227ENST00000540709 E2F7Q96AV8 911 aa5.38□□□□□ -1.55
MDM2-227ENST00000540709 TUBGCP5Q96RT8 1024 aa5.38□□□□□ -1.55
MDM2-227ENST00000540709 ZNF341Q9BYN7 854 aa5.38□□□□□ -1.55
MDM2-227ENST00000540709 ACSS2Q9NR19 701 aa5.38□□□□□ -1.55
MDM2-227ENST00000540709 ZKSCAN5Q9Y2L8 839 aa5.38□□□□□ -1.55
MDM2-227ENST00000540709 UBA6A0AVT1 1052 aaPredicted RBP5.37□□□□□ -1.55
MDM2-227ENST00000540709 C1QTNF3-AMACRE9PGA6 284 aa5.37□□□□□ -1.55
MDM2-227ENST00000540709 DVL2O14641 736 aa5.37□□□□□ -1.55
MDM2-227ENST00000540709 KPNA6O60684 536 aa5.37□□□□□ -1.55
MDM2-227ENST00000540709 ACO1P21399 889 aaKnown RBP5.37□□□□□ -1.55
MDM2-227ENST00000540709 PTX3P26022 381 aaPredicted RBP5.37□□□□□ -1.55
MDM2-227ENST00000540709 STAT3P40763 770 aa5.37□□□□□ -1.55
MDM2-227ENST00000540709 MECP2P51608 486 aaKnown RBP5.37□□□□□ -1.55
MDM2-227ENST00000540709 ROM1Q03395 351 aa5.37□□□□□ -1.55
MDM2-227ENST00000540709 PRKD1Q15139 912 aaPredicted RBP5.37□□□□□ -1.55
MDM2-227ENST00000540709 TMEM200BQ69YZ2 307 aa5.37□□□□□ -1.55
MDM2-227ENST00000540709 TRIM68Q6AZZ1 485 aa5.37□□□□□ -1.55
MDM2-227ENST00000540709 SLFN12LQ6IEE8 588 aa5.37□□□□□ -1.55
MDM2-227ENST00000540709 CNNM4Q6P4Q7 775 aa5.37□□□□□ -1.55
MDM2-227ENST00000540709 OTOP1Q7RTM1 612 aa5.37□□□□□ -1.55
MDM2-227ENST00000540709 RTN4RL1Q86UN2 441 aaPredicted RBP5.37□□□□□ -1.55
MDM2-227ENST00000540709 FOXRED1Q96CU9 486 aaPredicted RBP5.37□□□□□ -1.55
MDM2-227ENST00000540709 VPS11Q9H270 941 aa5.37□□□□□ -1.55
MDM2-227ENST00000540709 IFT57Q9NWB7 429 aa5.37□□□□□ -1.55
MDM2-227ENST00000540709 CD2APQ9Y5K6 639 aa5.37□□□□□ -1.55
MDM2-227ENST00000540709 GOLGA8BA8MQT2 603 aa5.36□□□□□ -1.55
MDM2-227ENST00000540709 MATN2O00339 956 aa5.36□□□□□ -1.55
MDM2-227ENST00000540709 RAD17O75943 681 aa5.36□□□□□ -1.55
MDM2-227ENST00000540709 C6P13671 934 aa5.36□□□□□ -1.55
MDM2-227ENST00000540709 MSX2P35548 267 aaPredicted RBP5.36□□□□□ -1.55
MDM2-227ENST00000540709 ATP2C1P98194 919 aaPredicted RBP5.36□□□□□ -1.55
MDM2-227ENST00000540709 TCEA2Q15560 299 aa5.36□□□□□ -1.55
MDM2-227ENST00000540709 TTC38Q5R3I4 469 aa5.36□□□□□ -1.55
MDM2-227ENST00000540709 RNPC3Q96LT9 517 aaKnown RBP5.36□□□□□ -1.55
MDM2-227ENST00000540709 FOXB1Q99853 325 aa5.36□□□□□ -1.55
MDM2-227ENST00000540709 SEMA4AQ9H3S1 761 aa5.36□□□□□ -1.55
MDM2-227ENST00000540709 TOMM22Q9NS69 142 aa5.36□□□□□ -1.55
MDM2-227ENST00000540709 FANCLQ9NW38 375 aa5.36□□□□□ -1.55
MDM2-227ENST00000540709 TMEM260Q9NX78 707 aa5.36□□□□□ -1.55
MDM2-227ENST00000540709 SAE1Q9UBE0 346 aaPredicted RBP5.36□□□□□ -1.55
MDM2-227ENST00000540709 RBM8AQ9Y5S9 174 aaKnown RBP5.36□□□□□ -1.55
MDM2-227ENST00000540709 CBX4O00257 560 aa5.35□□□□□ -1.55
MDM2-227ENST00000540709 CYP17A1P05093 508 aa5.35□□□□□ -1.55
MDM2-227ENST00000540709 FNTBP49356 437 aa5.35□□□□□ -1.55
MDM2-227ENST00000540709 USP39Q53GS9 565 aaKnown RBP5.35□□□□□ -1.55
MDM2-227ENST00000540709 POLNQ7Z5Q5 900 aa5.35□□□□□ -1.55
MDM2-227ENST00000540709 SGMS1Q86VZ5 419 aa5.35□□□□□ -1.55
MDM2-227ENST00000540709 HOMER1Q86YM7 354 aa5.35□□□□□ -1.55
MDM2-227ENST00000540709 NXPE1Q8N323 547 aa5.35□□□□□ -1.55
MDM2-227ENST00000540709 SHCBP1Q8NEM2 672 aa5.35□□□□□ -1.55
MDM2-227ENST00000540709 APPBP2Q92624 585 aa5.35□□□□□ -1.55
MDM2-227ENST00000540709 GCDHQ92947 438 aaPredicted RBP5.35□□□□□ -1.55
MDM2-227ENST00000540709 MAML3Q96JK9 1138 aa5.35□□□□□ -1.55
MDM2-227ENST00000540709 RPL10LQ96L21 214 aaKnown RBP5.35□□□□□ -1.55
MDM2-227ENST00000540709 ELF4Q99607 663 aaPredicted RBP5.35□□□□□ -1.55
MDM2-227ENST00000540709 CSRNP2Q9H175 543 aa5.35□□□□□ -1.55
MDM2-227ENST00000540709 H2AFY2Q9P0M6 372 aaPredicted RBP5.35□□□□□ -1.55
MDM2-227ENST00000540709 MAGEC2Q9UBF1 373 aaPredicted RBP5.35□□□□□ -1.55
MDM2-227ENST00000540709 B4GALT6Q9UBX8 382 aa5.35□□□□□ -1.55
MDM2-227ENST00000540709 DENND2AQ9ULE3 1009 aa5.35□□□□□ -1.55
MDM2-227ENST00000540709 GAS7O60861 476 aa5.34□□□□□ -1.55
MDM2-227ENST00000540709 H2AFYO75367 372 aaKnown RBP5.34□□□□□ -1.55
MDM2-227ENST00000540709 PRLP01236 227 aa5.34□□□□□ -1.55
MDM2-227ENST00000540709 RPS19P39019 145 aaKnown RBP5.34□□□□□ -1.55
MDM2-227ENST00000540709 ANTXR2P58335 489 aa5.34□□□□□ -1.55
MDM2-227ENST00000540709 HHEXQ03014 270 aa5.34□□□□□ -1.55
MDM2-227ENST00000540709 FOXL1Q12952 345 aa5.34□□□□□ -1.55
MDM2-227ENST00000540709 NFYCQ13952 458 aa5.34□□□□□ -1.55
MDM2-227ENST00000540709 GRM7Q14831 915 aa5.34□□□□□ -1.55
MDM2-227ENST00000540709 R3HDM1Q15032 1099 aaKnown RBP5.34□□□□□ -1.55
MDM2-227ENST00000540709 DGKDQ16760 1214 aa5.34□□□□□ -1.55
MDM2-227ENST00000540709 KLHDC10Q6PID8 442 aa5.34□□□□□ -1.55
MDM2-227ENST00000540709 DHX37Q8IY37 1157 aaKnown RBP5.34□□□□□ -1.55
MDM2-227ENST00000540709 D2HGDHQ8N465 521 aa5.34□□□□□ -1.55
MDM2-227ENST00000540709 ZNF808Q8N4W9 903 aaPredicted RBP5.34□□□□□ -1.55
MDM2-227ENST00000540709 CFHR4Q92496 578 aa5.34□□□□□ -1.55
MDM2-227ENST00000540709 FAM89AQ96GI7 184 aa5.34□□□□□ -1.55
MDM2-227ENST00000540709 PLA2G3Q9NZ20 509 aa5.34□□□□□ -1.55
MDM2-227ENST00000540709 DNAI1Q9UI46 699 aa5.34□□□□□ -1.55
MDM2-227ENST00000540709 A0A1W2PRX2 142 aa5.33□□□□□ -1.56
MDM2-227ENST00000540709 AKAP8O43823 692 aaKnown RBP5.33□□□□□ -1.56
MDM2-227ENST00000540709 TACR2P21452 398 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms