RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 LETM2Q2VYF4 491 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 SLC24A5Q71RS6 500 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 OTUD6AQ7L8S5 288 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 KIAA0319LQ8IZA0 1049 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 CLP1Q92989 425 aaKnown RBP11.68□□□□□ -0.54
CDCA3-208ENST00000540683 P2RX5Q93086 422 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 ZSCAN31Q96LW9 406 aaPredicted RBP11.68□□□□□ -0.54
CDCA3-208ENST00000540683 MBOAT7Q96N66 472 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 NIFKQ9BYG3 293 aaKnown RBP11.68□□□□□ -0.54
CDCA3-208ENST00000540683 ELAC1Q9H777 363 aaKnown RBP11.68□□□□□ -0.54
CDCA3-208ENST00000540683 DACT1Q9NYF0 836 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 TPCN1Q9ULQ1 816 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 GINS2Q9Y248 185 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 TELO2Q9Y4R8 837 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 PCDHB12Q9Y5F1 795 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 TTC3P53804 2025 aa11.68□□□□□ -0.54
CDCA3-208ENST00000540683 M0R2N6 131 aa11.67□□□□□ -0.54
CDCA3-208ENST00000540683 CHMP2AO43633 222 aa11.67□□□□□ -0.54
CDCA3-208ENST00000540683 CCNT1O60563 726 aaKnown RBP11.67□□□□□ -0.54
CDCA3-208ENST00000540683 P4HBP07237 508 aaKnown RBP11.67□□□□□ -0.54
CDCA3-208ENST00000540683 SFPQP23246 707 aaKnown RBP eCLIP11.67□□□□□ -0.54
CDCA3-208ENST00000540683 EIF4BP23588 611 aaKnown RBP11.67□□□□□ -0.54
CDCA3-208ENST00000540683 BMPR1AP36894 532 aa11.67□□□□□ -0.54
CDCA3-208ENST00000540683 QARSP47897 775 aaKnown RBP11.67□□□□□ -0.54
CDCA3-208ENST00000540683 AK2P54819 239 aa11.67□□□□□ -0.54
CDCA3-208ENST00000540683 PPP2R5CQ13362 524 aa11.67□□□□□ -0.54
CDCA3-208ENST00000540683 BMS1Q14692 1282 aaKnown RBP11.67□□□□□ -0.54
CDCA3-208ENST00000540683 INF2Q27J81 1249 aa11.67□□□□□ -0.54
CDCA3-208ENST00000540683 PDE12Q6L8Q7 609 aaKnown RBP11.67□□□□□ -0.54
CDCA3-208ENST00000540683 EFCAB12Q6NXP0 572 aa11.67□□□□□ -0.54
CDCA3-208ENST00000540683 ABI1Q8IZP0 508 aa11.67□□□□□ -0.54
CDCA3-208ENST00000540683 NEK9Q8TD19 979 aa11.67□□□□□ -0.54
CDCA3-208ENST00000540683 GDPD5Q8WTR4 605 aa11.67□□□□□ -0.54
CDCA3-208ENST00000540683 TRAPPC12Q8WVT3 735 aa11.67□□□□□ -0.54
CDCA3-208ENST00000540683 SLC7A3Q8WY07 619 aa11.67□□□□□ -0.54
CDCA3-208ENST00000540683 GTF3C6Q969F1 213 aa11.67□□□□□ -0.54
CDCA3-208ENST00000540683 LLPHQ9BRT6 129 aaKnown RBP11.67□□□□□ -0.54
CDCA3-208ENST00000540683 GCOM2Q9BZD3 368 aaPredicted RBP11.67□□□□□ -0.54
CDCA3-208ENST00000540683 NSUN3Q9H649 340 aaKnown RBP11.67□□□□□ -0.54
CDCA3-208ENST00000540683 RGS18Q9NS28 235 aa11.67□□□□□ -0.54
CDCA3-208ENST00000540683 LIMCH1Q9UPQ0 1083 aa11.67□□□□□ -0.54
CDCA3-208ENST00000540683 PRRC2BQ5JSZ5 2229 aaKnown RBP11.67□□□□□ -0.54
CDCA3-208ENST00000540683 RFC5P40937 340 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 HMGN5P82970 282 aaKnown RBP11.66□□□□□ -0.54
CDCA3-208ENST00000540683 UBE3AQ05086 875 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 TMEM62Q0P6H9 643 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 ORC2Q13416 577 aaPredicted RBP11.66□□□□□ -0.54
CDCA3-208ENST00000540683 PCBP1Q15365 356 aaKnown RBP eCLIP11.66□□□□□ -0.54
CDCA3-208ENST00000540683 TCTN1Q2MV58 587 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 TMCO2Q7Z6W1 182 aaPredicted RBP11.66□□□□□ -0.54
CDCA3-208ENST00000540683 ZNF410Q86VK4 478 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 BANK1Q8NDB2 785 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 ETNPPLQ8TBG4 499 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 ADAMTS19Q8TE59 1207 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 TCP11Q8WWU5 503 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 ZNF689Q96CS4 500 aaPredicted RBP11.66□□□□□ -0.54
CDCA3-208ENST00000540683 CCDC43Q96MW1 224 aaKnown RBP11.66□□□□□ -0.54
CDCA3-208ENST00000540683 UHRF1Q96T88 793 aaPredicted RBP11.66□□□□□ -0.54
CDCA3-208ENST00000540683 ADAM2Q99965 735 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 C17orf80Q9BSJ5 609 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 UNC45AQ9H3U1 944 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 AGO3Q9H9G7 860 aaKnown RBP11.66□□□□□ -0.54
CDCA3-208ENST00000540683 ATP6V0A4Q9HBG4 840 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 CHST12Q9NRB3 414 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 SH2B1Q9NRF2 756 aaPredicted RBP11.66□□□□□ -0.54
CDCA3-208ENST00000540683 TMEM161AQ9NX61 479 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 STK39Q9UEW8 545 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 SEPT9Q9UHD8 586 aaPredicted RBP11.66□□□□□ -0.54
CDCA3-208ENST00000540683 ST3GAL5Q9UNP4 418 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 NLRC5Q86WI3 1866 aa11.66□□□□□ -0.54
CDCA3-208ENST00000540683 EVPLQ92817 2033 aa11.65□□□□□ -0.54
CDCA3-208ENST00000540683 COL4A4P53420 1690 aaPredicted RBP11.65□□□□□ -0.54
CDCA3-208ENST00000540683 ZBTB42B2RXF5 422 aa11.65□□□□□ -0.54
CDCA3-208ENST00000540683 RFXAPO00287 272 aa11.65□□□□□ -0.54
CDCA3-208ENST00000540683 ASAP2O43150 1006 aa11.65□□□□□ -0.54
CDCA3-208ENST00000540683 LPXNO60711 386 aa11.65□□□□□ -0.54
CDCA3-208ENST00000540683 PPFIA3O75145 1194 aa11.65□□□□□ -0.54
CDCA3-208ENST00000540683 EOMESO95936 686 aa11.65□□□□□ -0.54
CDCA3-208ENST00000540683 SRGAP2BP0DMP2 458 aa11.65□□□□□ -0.54
CDCA3-208ENST00000540683 NLRP11P59045 1033 aaKnown RBP11.65□□□□□ -0.54
CDCA3-208ENST00000540683 NCBP1Q09161 790 aaKnown RBP11.65□□□□□ -0.54
CDCA3-208ENST00000540683 KIZQ2M2Z5 673 aa11.65□□□□□ -0.54
CDCA3-208ENST00000540683 SPOUT1Q5T280 376 aaKnown RBP11.65□□□□□ -0.54
CDCA3-208ENST00000540683 PIK3AP1Q6ZUJ8 805 aa11.65□□□□□ -0.54
CDCA3-208ENST00000540683 NLRP7Q8WX94 980 aa11.65□□□□□ -0.54
CDCA3-208ENST00000540683 ERVK-5Q9HDB9 667 aa11.65□□□□□ -0.54
CDCA3-208ENST00000540683 KCNMB3Q9NPA1 279 aa11.65□□□□□ -0.54
CDCA3-208ENST00000540683 PUF60Q9UHX1 559 aaKnown RBP11.65□□□□□ -0.54
CDCA3-208ENST00000540683 KCNJ14Q9UNX9 436 aa11.65□□□□□ -0.54
CDCA3-208ENST00000540683 NCOR1O75376 2440 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 EPOPA6NHQ4 379 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 DDX11L8A8MPP1 907 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 RIOK3O14730 519 aaKnown RBP11.64□□□□□ -0.55
CDCA3-208ENST00000540683 GPR32O75388 356 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 TDP2O95551 362 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 MMP1P03956 469 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 VTNP04004 478 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 LAG3P18627 525 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 ATP4AP20648 1035 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 PPM1AP35813 382 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms