RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 SEC24BO95487 1268 aa10.15□□□□□ -0.78
LMO3-222ENST00000540445 C22orf31O95567 290 aa10.15□□□□□ -0.78
LMO3-222ENST00000540445 OATP04181 439 aa10.15□□□□□ -0.78
LMO3-222ENST00000540445 CTNNB1P35222 781 aa10.15□□□□□ -0.78
LMO3-222ENST00000540445 BMPR1AP36894 532 aa10.15□□□□□ -0.78
LMO3-222ENST00000540445 CRYBB1P53674 252 aaPredicted RBP10.15□□□□□ -0.78
LMO3-222ENST00000540445 NLRP11P59045 1033 aaKnown RBP10.15□□□□□ -0.78
LMO3-222ENST00000540445 TBC1D8BQ0IIM8 1120 aa10.15□□□□□ -0.78
LMO3-222ENST00000540445 NPY5RQ15761 445 aa10.15□□□□□ -0.78
LMO3-222ENST00000540445 ME3Q16798 604 aa10.15□□□□□ -0.78
LMO3-222ENST00000540445 EP400NLQ6ZTU2 488 aa10.15□□□□□ -0.78
LMO3-222ENST00000540445 PIK3AP1Q6ZUJ8 805 aa10.15□□□□□ -0.78
LMO3-222ENST00000540445 ZNF689Q96CS4 500 aaPredicted RBP10.15□□□□□ -0.78
LMO3-222ENST00000540445 MRPL38Q96DV4 380 aaKnown RBP10.15□□□□□ -0.78
LMO3-222ENST00000540445 MAP7D2Q96T17 732 aa10.15□□□□□ -0.78
LMO3-222ENST00000540445 OSMRQ99650 979 aa10.15□□□□□ -0.78
LMO3-222ENST00000540445 ADAM2Q99965 735 aa10.15□□□□□ -0.78
LMO3-222ENST00000540445 BRMS1Q9HCU9 246 aa10.15□□□□□ -0.78
LMO3-222ENST00000540445 ST3GAL5Q9UNP4 418 aa10.15□□□□□ -0.78
LMO3-222ENST00000540445 NOC2LQ9Y3T9 749 aaKnown RBP10.15□□□□□ -0.78
LMO3-222ENST00000540445 RWDD3Q9Y3V2 267 aa10.15□□□□□ -0.78
LMO3-222ENST00000540445 ADGRA3Q8IWK6 1321 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 DDX11L8A8MPP1 907 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 C5orf67F2Z3F1 127 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 ZNF862O60290 1169 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 BAG4O95429 457 aaKnown RBP10.14□□□□□ -0.79
LMO3-222ENST00000540445 CTDNEP1O95476 244 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 RB1P06400 928 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 CLCN3P51790 818 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 PRKCEQ02156 737 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 TRIM29Q14134 588 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 COL19A1Q14993 1142 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 MTERF2Q49AM1 385 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 PAN2Q504Q3 1202 aaKnown RBP10.14□□□□□ -0.79
LMO3-222ENST00000540445 MOXD1Q6UVY6 613 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 NEK8Q86SG6 692 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 NPAS4Q8IUM7 802 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 LRRC71Q8N4P6 559 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 RDM1Q8NG50 284 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 OXER1Q8TDS5 423 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 TMEM40Q8WWA1 233 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 CLP1Q92989 425 aaKnown RBP10.14□□□□□ -0.79
LMO3-222ENST00000540445 ZNF668Q96K58 619 aaPredicted RBP10.14□□□□□ -0.79
LMO3-222ENST00000540445 SCLT1Q96NL6 688 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 TMX1Q9H3N1 280 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 UBE2ZQ9H832 354 aaPredicted RBP10.14□□□□□ -0.79
LMO3-222ENST00000540445 ERVK-5Q9HDB9 667 aa10.14□□□□□ -0.79
LMO3-222ENST00000540445 SEPT9Q9UHD8 586 aaPredicted RBP10.14□□□□□ -0.79
LMO3-222ENST00000540445 SLC37A4O43826 429 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 GPR32O75388 356 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 CSPG5O95196 566 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 FDPSP14324 419 aaKnown RBP10.13□□□□□ -0.79
LMO3-222ENST00000540445 ZSCAN20P17040 1043 aaPredicted RBP10.13□□□□□ -0.79
LMO3-222ENST00000540445 KRT2P35908 639 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 SARSP49591 514 aaKnown RBP10.13□□□□□ -0.79
LMO3-222ENST00000540445 DNM2P50570 870 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 FOSBP53539 338 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 UGCGQ16739 394 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 LEXMQ3ZCV2 418 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 XKR3Q5GH77 459 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 SPOUT1Q5T280 376 aaKnown RBP10.13□□□□□ -0.79
LMO3-222ENST00000540445 PPP4R3AQ6IN85 833 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 SLC24A5Q71RS6 500 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 BANK1Q8NDB2 785 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 ETNPPLQ8TBG4 499 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 GTF3C6Q969F1 213 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 FAM20AQ96MK3 541 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 NAP1L4Q99733 375 aaKnown RBP10.13□□□□□ -0.79
LMO3-222ENST00000540445 SH2D3AQ9BRG2 576 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 C11orf84Q9BUA3 381 aaPredicted RBP10.13□□□□□ -0.79
LMO3-222ENST00000540445 RGS18Q9NS28 235 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 C1orf112Q9NSG2 853 aa10.13□□□□□ -0.79
LMO3-222ENST00000540445 ARID2Q68CP9 1835 aa10.12□□□□□ -0.79
LMO3-222ENST00000540445 TMEM150BA6NC51 233 aa10.12□□□□□ -0.79
LMO3-222ENST00000540445 MGEA5O60502 916 aa10.12□□□□□ -0.79
LMO3-222ENST00000540445 DKC1O60832 514 aaKnown RBP eCLIP10.12□□□□□ -0.79
LMO3-222ENST00000540445 LARGE1O95461 756 aa10.12□□□□□ -0.79
LMO3-222ENST00000540445 GCFC2P16383 781 aaKnown RBP10.12□□□□□ -0.79
LMO3-222ENST00000540445 EIF4BP23588 611 aaKnown RBP10.12□□□□□ -0.79
LMO3-222ENST00000540445 PSMC5P62195 406 aa10.12□□□□□ -0.79
LMO3-222ENST00000540445 CDC42EP1Q00587 391 aa10.12□□□□□ -0.79
LMO3-222ENST00000540445 NR5A1Q13285 461 aa10.12□□□□□ -0.79
LMO3-222ENST00000540445 TIGD5Q53EQ6 642 aa10.12□□□□□ -0.79
LMO3-222ENST00000540445 FAM43BQ6ZT52 329 aaPredicted RBP10.12□□□□□ -0.79
LMO3-222ENST00000540445 FAM228AQ86W67 206 aa10.12□□□□□ -0.79
LMO3-222ENST00000540445 CMTR2Q8IYT2 770 aaKnown RBP10.12□□□□□ -0.79
LMO3-222ENST00000540445 ZNF710Q8N1W2 664 aa10.12□□□□□ -0.79
LMO3-222ENST00000540445 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.12□□□□□ -0.79
LMO3-222ENST00000540445 NLRP7Q8WX94 980 aa10.12□□□□□ -0.79
LMO3-222ENST00000540445 MBOAT7Q96N66 472 aa10.12□□□□□ -0.79
LMO3-222ENST00000540445 PLVAPQ9BX97 442 aa10.12□□□□□ -0.79
LMO3-222ENST00000540445 NIFKQ9BYG3 293 aaKnown RBP10.12□□□□□ -0.79
LMO3-222ENST00000540445 LMAN2LQ9H0V9 348 aa10.12□□□□□ -0.79
LMO3-222ENST00000540445 ALG13Q9NP73 1137 aaKnown RBP10.12□□□□□ -0.79
LMO3-222ENST00000540445 MRPL42Q9Y6G3 142 aaKnown RBP10.12□□□□□ -0.79
LMO3-222ENST00000540445 TBKBP1A7MCY6 615 aa10.11□□□□□ -0.79
LMO3-222ENST00000540445 BTBD18B2RXH4 712 aa10.11□□□□□ -0.79
LMO3-222ENST00000540445 EML1O00423 815 aa10.11□□□□□ -0.79
LMO3-222ENST00000540445 GRM6O15303 877 aa10.11□□□□□ -0.79
LMO3-222ENST00000540445 P4HBP07237 508 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms