RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 PSAPP07602 524 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 CLK2P49760 499 aaKnown RBP14.16□□□□□ -0.14
COPS7A-211ENST00000540408 ERVFC1P60507 584 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 FAM189BP81408 668 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 FGD1P98174 961 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 SETQ01105 290 aaPredicted RBP14.16□□□□□ -0.14
COPS7A-211ENST00000540408 PLCB3Q01970 1234 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 SIGLEC14Q08ET2 396 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 BMS1Q14692 1282 aaKnown RBP14.16□□□□□ -0.14
COPS7A-211ENST00000540408 JAKMIP3Q5VZ66 844 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 ZNF746Q6NUN9 644 aaPredicted RBP14.16□□□□□ -0.14
COPS7A-211ENST00000540408 TMEM184AQ6ZMB5 413 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 DHX32Q7L7V1 743 aaKnown RBP14.16□□□□□ -0.14
COPS7A-211ENST00000540408 TRMT1LQ7Z2T5 733 aaKnown RBP14.16□□□□□ -0.14
COPS7A-211ENST00000540408 ZBTB33Q86T24 672 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 SMAP1Q8IYB5 467 aaPredicted RBP14.16□□□□□ -0.14
COPS7A-211ENST00000540408 CCDC12Q8WUD4 166 aaPredicted RBP14.16□□□□□ -0.14
COPS7A-211ENST00000540408 TMEM40Q8WWA1 233 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 MRPS27Q92552 414 aaKnown RBP14.16□□□□□ -0.14
COPS7A-211ENST00000540408 MAP7D2Q96T17 732 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 PPP1R16BQ96T49 567 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 TCF25Q9BQ70 676 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 TMEM117Q9H0C3 514 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 IRF2BPLQ9H1B7 796 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 NAP1L2Q9ULW6 460 aaPredicted RBP14.16□□□□□ -0.14
COPS7A-211ENST00000540408 SAMM50Q9Y512 469 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 PCDHA10Q9Y5I2 948 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 FAM86B1E9PN63 330 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 C22orf31O95567 290 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 VTNP04004 478 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 CYP3A4P08684 503 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 FAM86B2P0C5J1 330 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 FGFR1P11362 822 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 HOXB8P17481 243 aaPredicted RBP14.15□□□□□ -0.14
COPS7A-211ENST00000540408 PPM1AP35813 382 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 TECP42680 631 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 COL9A3Q14050 684 aaPredicted RBP14.15□□□□□ -0.14
COPS7A-211ENST00000540408 PLPP4Q5VZY2 271 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 FAM228AQ86W67 206 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 RASGRP4Q8TDF6 673 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 SUSD6Q92537 303 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 FAM167AQ96KS9 214 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 ZNF558Q96NG5 402 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 CWH43Q9H720 699 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 C6orf50Q9HD87 102 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 NRBP2Q9NSY0 501 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 BRPF3Q9ULD4 1205 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 AKT3Q9Y243 479 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 MAFBQ9Y5Q3 323 aaPredicted RBP14.15□□□□□ -0.14
COPS7A-211ENST00000540408 LOXHD1Q8IVV2 1947 aa14.15□□□□□ -0.14
COPS7A-211ENST00000540408 KIAA1671Q9BY89 1806 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 KLF18A0A0U1RQI7 1052 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 ZBTB42B2RXF5 422 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 FSCN2O14926 492 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 DHX15O43143 795 aaKnown RBP14.14□□□□□ -0.15
COPS7A-211ENST00000540408 GPR32O75388 356 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 HMGB1P09429 215 aaKnown RBP14.14□□□□□ -0.15
COPS7A-211ENST00000540408 ATP4AP20648 1035 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 GNA11P29992 359 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 RCAN1P53805 252 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 NLRP11P59045 1033 aaKnown RBP14.14□□□□□ -0.15
COPS7A-211ENST00000540408 EXOSC10Q01780 885 aaKnown RBP14.14□□□□□ -0.15
COPS7A-211ENST00000540408 FUT2Q10981 343 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 KRT32Q14532 448 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 IER5LQ5T953 404 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 ANKRD54Q6NXT1 300 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 KCNT2Q6UVM3 1135 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 TMC7Q7Z402 723 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 LRRC43Q8N309 656 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 PRSS33Q8NF86 280 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 SPG21Q9NZD8 308 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 NR2E1Q9Y466 385 aa14.14□□□□□ -0.15
COPS7A-211ENST00000540408 C5orf42Q9H799 3197 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 PLXNA4Q9HCM2 1894 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 IGLV3-22A0A075B6J6 115 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 EIF4BP23588 611 aaKnown RBP14.13□□□□□ -0.15
COPS7A-211ENST00000540408 RBM10P98175 930 aaKnown RBP14.13□□□□□ -0.15
COPS7A-211ENST00000540408 AKAP17AQ02040 695 aaKnown RBP14.13□□□□□ -0.15
COPS7A-211ENST00000540408 APOBRQ0VD83 1088 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 DSC3Q14574 896 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 PTPN21Q16825 1174 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 PFKFB3Q16875 520 aaPredicted RBP14.13□□□□□ -0.15
COPS7A-211ENST00000540408 TPRNQ4KMQ1 711 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 CES5AQ6NT32 575 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 EFCAB12Q6NXP0 572 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 LLGL2Q6P1M3 1020 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 REXO1Q8N1G1 1221 aaKnown RBP14.13□□□□□ -0.15
COPS7A-211ENST00000540408 TMEM87AQ8NBN3 555 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 VN1R2Q8NFZ6 395 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 CASP10Q92851 521 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 TCEANC2Q96MN5 208 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 SCLT1Q96NL6 688 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 CASD1Q96PB1 797 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 S1PR5Q9H228 398 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 GABBR1Q9UBS5 961 aa14.13□□□□□ -0.15
COPS7A-211ENST00000540408 ESYT2A0FGR8 921 aa14.12□□□□□ -0.15
COPS7A-211ENST00000540408 CDC27P30260 824 aa14.12□□□□□ -0.15
COPS7A-211ENST00000540408 CA8P35219 290 aa14.12□□□□□ -0.15
COPS7A-211ENST00000540408 ALDH7A1P49419 539 aaKnown RBP14.12□□□□□ -0.15
COPS7A-211ENST00000540408 METAP2P50579 478 aaKnown RBP eCLIP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms