RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 PUF60Q9UHX1 559 aaKnown RBP22.7■■□□□ 1.22
LPCAT3-210ENST00000540090 V9GY48 417 aaPredicted RBP22.7■■□□□ 1.22
LPCAT3-210ENST00000540090 LOXHD1Q8IVV2 1947 aa22.7■■□□□ 1.22
LPCAT3-210ENST00000540090 FAM86B1E9PN63 330 aa22.69■■□□□ 1.22
LPCAT3-210ENST00000540090 GPR32O75388 356 aa22.69■■□□□ 1.22
LPCAT3-210ENST00000540090 C22orf31O95567 290 aa22.69■■□□□ 1.22
LPCAT3-210ENST00000540090 FAM86B2P0C5J1 330 aa22.69■■□□□ 1.22
LPCAT3-210ENST00000540090 FGFR1P11362 822 aa22.69■■□□□ 1.22
LPCAT3-210ENST00000540090 KIZQ2M2Z5 673 aa22.69■■□□□ 1.22
LPCAT3-210ENST00000540090 ANKRD54Q6NXT1 300 aa22.69■■□□□ 1.22
LPCAT3-210ENST00000540090 SYCE2Q6PIF2 218 aa22.69■■□□□ 1.22
LPCAT3-210ENST00000540090 APOA5Q6Q788 366 aa22.69■■□□□ 1.22
LPCAT3-210ENST00000540090 OSMRQ99650 979 aa22.69■■□□□ 1.22
LPCAT3-210ENST00000540090 TMEM117Q9H0C3 514 aa22.69■■□□□ 1.22
LPCAT3-210ENST00000540090 BARHL2Q9NY43 387 aa22.69■■□□□ 1.22
LPCAT3-210ENST00000540090 PLXNA4Q9HCM2 1894 aa22.68■■□□□ 1.22
LPCAT3-210ENST00000540090 hCG_1984214I3L0E3 225 aa22.68■■□□□ 1.22
LPCAT3-210ENST00000540090 SRGAP2BP0DMP2 458 aa22.68■■□□□ 1.22
LPCAT3-210ENST00000540090 TECP42680 631 aa22.68■■□□□ 1.22
LPCAT3-210ENST00000540090 APOBRQ0VD83 1088 aa22.68■■□□□ 1.22
LPCAT3-210ENST00000540090 PTPN21Q16825 1174 aa22.68■■□□□ 1.22
LPCAT3-210ENST00000540090 PLA2G4DQ86XP0 818 aa22.68■■□□□ 1.22
LPCAT3-210ENST00000540090 ZNF713Q8N859 430 aaPredicted RBP22.68■■□□□ 1.22
LPCAT3-210ENST00000540090 BBXQ8WY36 941 aaPredicted RBP22.68■■□□□ 1.22
LPCAT3-210ENST00000540090 ESYT1Q9BSJ8 1104 aa22.68■■□□□ 1.22
LPCAT3-210ENST00000540090 NGRNQ9NPE2 291 aaKnown RBP22.68■■□□□ 1.22
LPCAT3-210ENST00000540090 MAFBQ9Y5Q3 323 aaPredicted RBP22.68■■□□□ 1.22
LPCAT3-210ENST00000540090 IPO5O00410 1097 aaKnown RBP22.67■■□□□ 1.22
LPCAT3-210ENST00000540090 HOXB8P17481 243 aaPredicted RBP22.67■■□□□ 1.22
LPCAT3-210ENST00000540090 AVPR2P30518 371 aa22.67■■□□□ 1.22
LPCAT3-210ENST00000540090 RTN1Q16799 776 aa22.67■■□□□ 1.22
LPCAT3-210ENST00000540090 PLPP4Q5VZY2 271 aa22.67■■□□□ 1.22
LPCAT3-210ENST00000540090 LRRC55Q6ZSA7 311 aa22.67■■□□□ 1.22
LPCAT3-210ENST00000540090 CRYGNQ8WXF5 182 aa22.67■■□□□ 1.22
LPCAT3-210ENST00000540090 CASD1Q96PB1 797 aa22.67■■□□□ 1.22
LPCAT3-210ENST00000540090 PPP1R16BQ96T49 567 aa22.67■■□□□ 1.22
LPCAT3-210ENST00000540090 TCF25Q9BQ70 676 aa22.67■■□□□ 1.22
LPCAT3-210ENST00000540090 FNDC1Q4ZHG4 1894 aaPredicted RBP22.66■■□□□ 1.22
LPCAT3-210ENST00000540090 IGLV3-22A0A075B6J6 115 aa22.66■■□□□ 1.22
LPCAT3-210ENST00000540090 HOXA2O43364 376 aa22.66■■□□□ 1.22
LPCAT3-210ENST00000540090 ST18O60284 1047 aa22.66■■□□□ 1.22
LPCAT3-210ENST00000540090 VTNP04004 478 aa22.66■■□□□ 1.22
LPCAT3-210ENST00000540090 CYP3A4P08684 503 aa22.66■■□□□ 1.22
LPCAT3-210ENST00000540090 VCPP55072 806 aaKnown RBP22.66■■□□□ 1.22
LPCAT3-210ENST00000540090 KCNT2Q6UVM3 1135 aa22.66■■□□□ 1.22
LPCAT3-210ENST00000540090 CKAP2LQ8IYA6 745 aa22.66■■□□□ 1.22
LPCAT3-210ENST00000540090 METTL13Q8N6R0 699 aa22.66■■□□□ 1.22
LPCAT3-210ENST00000540090 RNF19AQ9NV58 838 aa22.66■■□□□ 1.22
LPCAT3-210ENST00000540090 BRPF3Q9ULD4 1205 aa22.66■■□□□ 1.22
LPCAT3-210ENST00000540090 HIDE1A8MVS5 230 aa22.65■■□□□ 1.22
LPCAT3-210ENST00000540090 ZBTB43O43298 467 aa22.65■■□□□ 1.22
LPCAT3-210ENST00000540090 EXOSC10Q01780 885 aaKnown RBP22.65■■□□□ 1.22
LPCAT3-210ENST00000540090 ZNF746Q6NUN9 644 aaPredicted RBP22.65■■□□□ 1.22
LPCAT3-210ENST00000540090 YTHDC1Q96MU7 727 aaKnown RBP22.65■■□□□ 1.22
LPCAT3-210ENST00000540090 IRF2BPLQ9H1B7 796 aa22.65■■□□□ 1.22
LPCAT3-210ENST00000540090 ENTPD7Q9NQZ7 604 aa22.65■■□□□ 1.22
LPCAT3-210ENST00000540090 TBC1D22BQ9NU19 505 aa22.65■■□□□ 1.22
LPCAT3-210ENST00000540090 CACNA1HO95180 2353 aa22.65■■□□□ 1.22
LPCAT3-210ENST00000540090 MAGEB2O15479 319 aa22.64■■□□□ 1.21
LPCAT3-210ENST00000540090 KRT17Q04695 432 aa22.64■■□□□ 1.21
LPCAT3-210ENST00000540090 JAKMIP3Q5VZ66 844 aa22.64■■□□□ 1.21
LPCAT3-210ENST00000540090 SMAP1Q8IYB5 467 aaPredicted RBP22.64■■□□□ 1.21
LPCAT3-210ENST00000540090 ZNF558Q96NG5 402 aa22.64■■□□□ 1.21
LPCAT3-210ENST00000540090 ZNF577Q9BSK1 485 aa22.64■■□□□ 1.21
LPCAT3-210ENST00000540090 FAM217BQ9NTX9 383 aaPredicted RBP22.64■■□□□ 1.21
LPCAT3-210ENST00000540090 CEP131Q9UPN4 1083 aa22.64■■□□□ 1.21
LPCAT3-210ENST00000540090 PPM1AP35813 382 aa22.63■■□□□ 1.21
LPCAT3-210ENST00000540090 LLGL2Q6P1M3 1020 aa22.63■■□□□ 1.21
LPCAT3-210ENST00000540090 ZNF710Q8N1W2 664 aa22.63■■□□□ 1.21
LPCAT3-210ENST00000540090 LRRC43Q8N309 656 aa22.63■■□□□ 1.21
LPCAT3-210ENST00000540090 RIPOR3Q96MK2 946 aa22.63■■□□□ 1.21
LPCAT3-210ENST00000540090 APOL5Q9BWW9 433 aa22.63■■□□□ 1.21
LPCAT3-210ENST00000540090 ADAMTS10Q9H324 1103 aa22.63■■□□□ 1.21
LPCAT3-210ENST00000540090 ANO2Q9NQ90 1003 aa22.63■■□□□ 1.21
LPCAT3-210ENST00000540090 SPG21Q9NZD8 308 aa22.63■■□□□ 1.21
LPCAT3-210ENST00000540090 PCDHA10Q9Y5I2 948 aa22.63■■□□□ 1.21
LPCAT3-210ENST00000540090 PSAPP07602 524 aa22.62■■□□□ 1.21
LPCAT3-210ENST00000540090 ZSCAN20P17040 1043 aaPredicted RBP22.62■■□□□ 1.21
LPCAT3-210ENST00000540090 EIF4BP23588 611 aaKnown RBP22.62■■□□□ 1.21
LPCAT3-210ENST00000540090 NUBP1P53384 320 aa22.62■■□□□ 1.21
LPCAT3-210ENST00000540090 NLRP11P59045 1033 aaKnown RBP22.62■■□□□ 1.21
LPCAT3-210ENST00000540090 RNF20Q5VTR2 975 aa22.62■■□□□ 1.21
LPCAT3-210ENST00000540090 DHX32Q7L7V1 743 aaKnown RBP22.62■■□□□ 1.21
LPCAT3-210ENST00000540090 TRMT1LQ7Z2T5 733 aaKnown RBP22.62■■□□□ 1.21
LPCAT3-210ENST00000540090 TMC7Q7Z402 723 aa22.62■■□□□ 1.21
LPCAT3-210ENST00000540090 ECHDC2Q86YB7 292 aa22.62■■□□□ 1.21
LPCAT3-210ENST00000540090 ABI1Q8IZP0 508 aa22.62■■□□□ 1.21
LPCAT3-210ENST00000540090 LINC01465Q8N7H1 131 aa22.62■■□□□ 1.21
LPCAT3-210ENST00000540090 MRPL43Q8N983 215 aaKnown RBP22.62■■□□□ 1.21
LPCAT3-210ENST00000540090 CASP10Q92851 521 aa22.62■■□□□ 1.21
LPCAT3-210ENST00000540090 NR2E1Q9Y466 385 aa22.62■■□□□ 1.21
LPCAT3-210ENST00000540090 EVPLQ92817 2033 aa22.62■■□□□ 1.21
LPCAT3-210ENST00000540090 CDC27P30260 824 aa22.61■■□□□ 1.21
LPCAT3-210ENST00000540090 PBX3P40426 434 aa22.61■■□□□ 1.21
LPCAT3-210ENST00000540090 CLCN3P51790 818 aa22.61■■□□□ 1.21
LPCAT3-210ENST00000540090 SETQ01105 290 aaPredicted RBP22.61■■□□□ 1.21
LPCAT3-210ENST00000540090 EFCAB12Q6NXP0 572 aa22.61■■□□□ 1.21
LPCAT3-210ENST00000540090 TCEANC2Q96MN5 208 aa22.61■■□□□ 1.21
LPCAT3-210ENST00000540090 ADAM7Q9H2U9 754 aa22.61■■□□□ 1.21
LPCAT3-210ENST00000540090 FAM86C1Q9NVL1 165 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms