RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 TRAPPC12Q8WVT3 735 aa21.02■□□□□ 0.96
TNFRSF1A-213ENST00000540022 KATNAL1Q9BW62 490 aa21.02■□□□□ 0.96
TNFRSF1A-213ENST00000540022 GZF1Q9H116 711 aaPredicted RBP21.02■□□□□ 0.96
TNFRSF1A-213ENST00000540022 POLD4Q9HCU8 107 aa21.02■□□□□ 0.96
TNFRSF1A-213ENST00000540022 KCND2Q9NZV8 630 aa21.02■□□□□ 0.96
TNFRSF1A-213ENST00000540022 RANBP2P49792 3224 aaKnown RBP21.01■□□□□ 0.95
TNFRSF1A-213ENST00000540022 H0YGN5 161 aa21.01■□□□□ 0.95
TNFRSF1A-213ENST00000540022 KRT18P05783 430 aaKnown RBP21.01■□□□□ 0.95
TNFRSF1A-213ENST00000540022 ASIC1P78348 528 aa21.01■□□□□ 0.95
TNFRSF1A-213ENST00000540022 ZSCAN23Q3MJ62 389 aa21.01■□□□□ 0.95
TNFRSF1A-213ENST00000540022 ZNF484Q5JVG2 852 aa21.01■□□□□ 0.95
TNFRSF1A-213ENST00000540022 REEP2Q9BRK0 252 aa21.01■□□□□ 0.95
TNFRSF1A-213ENST00000540022 TSEN34Q9BSV6 310 aaKnown RBP21.01■□□□□ 0.95
TNFRSF1A-213ENST00000540022 DHX33Q9H6R0 707 aaKnown RBP21.01■□□□□ 0.95
TNFRSF1A-213ENST00000540022 XPNPEP1Q9NQW7 623 aa21.01■□□□□ 0.95
TNFRSF1A-213ENST00000540022 PDLIM7Q9NR12 457 aa21.01■□□□□ 0.95
TNFRSF1A-213ENST00000540022 TUBE1Q9UJT0 475 aa21.01■□□□□ 0.95
TNFRSF1A-213ENST00000540022 DNM1LO00429 736 aa21■□□□□ 0.95
TNFRSF1A-213ENST00000540022 KLRC4O43908 158 aa21■□□□□ 0.95
TNFRSF1A-213ENST00000540022 DGAT1O75907 488 aa21■□□□□ 0.95
TNFRSF1A-213ENST00000540022 SMIM10L2AP0DMW4 78 aa21■□□□□ 0.95
TNFRSF1A-213ENST00000540022 SMIM10L2BP0DMW5 78 aa21■□□□□ 0.95
TNFRSF1A-213ENST00000540022 GUCY2CP25092 1073 aa21■□□□□ 0.95
TNFRSF1A-213ENST00000540022 SARSP49591 514 aaKnown RBP21■□□□□ 0.95
TNFRSF1A-213ENST00000540022 ACLYP53396 1101 aa21■□□□□ 0.95
TNFRSF1A-213ENST00000540022 IGBP1P78318 339 aa21■□□□□ 0.95
TNFRSF1A-213ENST00000540022 PPFIA1Q13136 1202 aa21■□□□□ 0.95
TNFRSF1A-213ENST00000540022 MAEAQ7L5Y9 396 aa21■□□□□ 0.95
TNFRSF1A-213ENST00000540022 SMARCE1Q969G3 411 aa21■□□□□ 0.95
TNFRSF1A-213ENST00000540022 PPME1Q9Y570 386 aa21■□□□□ 0.95
TNFRSF1A-213ENST00000540022 TRIOBPQ9H2D6 2365 aa21■□□□□ 0.95
TNFRSF1A-213ENST00000540022 MOXD2PA6NHM9 499 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 RSPH10B2B2RC85 870 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 RSPH10BP0C881 870 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 COL6A1P12109 1028 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 IDEP14735 1019 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 POLGP54098 1239 aaPredicted RBP20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 MAPK7Q13164 816 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 GRIK4Q16099 956 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 NT5DC1Q5TFE4 455 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 ZBTB10Q96DT7 871 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 C11orf49Q9H6J7 331 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 SETD4Q9NVD3 440 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 COL1A2P08123 1366 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 SYCE3A1L190 88 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 KBTBD13C9JR72 458 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 HIP1RO75146 1068 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 MAFO75444 373 aaPredicted RBP20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 SMC2O95347 1197 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 RPN1P04843 607 aaKnown RBP20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 RFC5P40937 340 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 TBC1D8BQ0IIM8 1120 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 EMC2Q15006 297 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 NBPF20Q3BBV1 942 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 UNC13DQ70J99 1090 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 DAW1Q8N136 415 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 ATP6V0A4Q9HBG4 840 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 GPRC5CQ9NQ84 441 aa20.99■□□□□ 0.95
TNFRSF1A-213ENST00000540022 PVALEFA0A1B0GWK0 134 aa20.98■□□□□ 0.95
TNFRSF1A-213ENST00000540022 CABYRO75952 493 aa20.98■□□□□ 0.95
TNFRSF1A-213ENST00000540022 LETM1O95202 739 aaPredicted RBP20.98■□□□□ 0.95
TNFRSF1A-213ENST00000540022 C22orf31O95567 290 aa20.98■□□□□ 0.95
TNFRSF1A-213ENST00000540022 HIC1Q14526 733 aa20.98■□□□□ 0.95
TNFRSF1A-213ENST00000540022 KMT5BQ4FZB7 885 aa20.98■□□□□ 0.95
TNFRSF1A-213ENST00000540022 MARCH8Q5T0T0 291 aa20.98■□□□□ 0.95
TNFRSF1A-213ENST00000540022 LMBR1Q8WVP7 490 aa20.98■□□□□ 0.95
TNFRSF1A-213ENST00000540022 SLC7A3Q8WY07 619 aa20.98■□□□□ 0.95
TNFRSF1A-213ENST00000540022 GSDMAQ96QA5 445 aa20.98■□□□□ 0.95
TNFRSF1A-213ENST00000540022 HDAC6Q9UBN7 1215 aa20.98■□□□□ 0.95
TNFRSF1A-213ENST00000540022 MAN1B1Q9UKM7 699 aa20.98■□□□□ 0.95
TNFRSF1A-213ENST00000540022 ODF2LQ9ULJ1 636 aa20.98■□□□□ 0.95
TNFRSF1A-213ENST00000540022 PHF24Q9UPV7 400 aa20.98■□□□□ 0.95
TNFRSF1A-213ENST00000540022 GRIN2DO15399 1336 aa20.97■□□□□ 0.95
TNFRSF1A-213ENST00000540022 NRCAMQ92823 1304 aa20.97■□□□□ 0.95
TNFRSF1A-213ENST00000540022 IGKV6-21A0A0C4DH24 114 aa20.97■□□□□ 0.95
TNFRSF1A-213ENST00000540022 A0A1W2PQ45 241 aaPredicted RBP20.97■□□□□ 0.95
TNFRSF1A-213ENST00000540022 A0A1W2PQY0 241 aa20.97■□□□□ 0.95
TNFRSF1A-213ENST00000540022 FRMD3A2A2Y4 597 aa20.97■□□□□ 0.95
TNFRSF1A-213ENST00000540022 RRN3P2A6NIE6 340 aa20.97■□□□□ 0.95
TNFRSF1A-213ENST00000540022 SFI1A8K8P3 1242 aa20.97■□□□□ 0.95
TNFRSF1A-213ENST00000540022 BIN1O00499 593 aa20.97■□□□□ 0.95
TNFRSF1A-213ENST00000540022 KLRC1P26715 233 aa20.97■□□□□ 0.95
TNFRSF1A-213ENST00000540022 FAM102BQ5T8I3 360 aa20.97■□□□□ 0.95
TNFRSF1A-213ENST00000540022 ISM2Q6H9L7 571 aa20.97■□□□□ 0.95
TNFRSF1A-213ENST00000540022 C7orf31Q8N865 590 aa20.97■□□□□ 0.95
TNFRSF1A-213ENST00000540022 MCPH1Q8NEM0 835 aa20.97■□□□□ 0.95
TNFRSF1A-213ENST00000540022 TIPINQ9BVW5 301 aa20.97■□□□□ 0.95
TNFRSF1A-213ENST00000540022 PANK4Q9NVE7 773 aa20.97■□□□□ 0.95
TNFRSF1A-213ENST00000540022 WDR81Q562E7 1941 aa20.97■□□□□ 0.95
TNFRSF1A-213ENST00000540022 EVI5O60447 810 aa20.96■□□□□ 0.95
TNFRSF1A-213ENST00000540022 HOXC8P31273 242 aa20.96■□□□□ 0.95
TNFRSF1A-213ENST00000540022 ZNF131P52739 623 aa20.96■□□□□ 0.95
TNFRSF1A-213ENST00000540022 ADAM17P78536 824 aa20.96■□□□□ 0.95
TNFRSF1A-213ENST00000540022 EHHADHQ08426 723 aa20.96■□□□□ 0.95
TNFRSF1A-213ENST00000540022 COASYQ13057 564 aa20.96■□□□□ 0.95
TNFRSF1A-213ENST00000540022 KCNB1Q14721 858 aa20.96■□□□□ 0.95
TNFRSF1A-213ENST00000540022 MTHFD1LQ6UB35 978 aa20.96■□□□□ 0.95
TNFRSF1A-213ENST00000540022 CCDC65Q8IXS2 484 aa20.96■□□□□ 0.95
TNFRSF1A-213ENST00000540022 VTI1AQ96AJ9 217 aa20.96■□□□□ 0.95
TNFRSF1A-213ENST00000540022 GLT1D1Q96MS3 346 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms