RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 UNCXA6NJT0 531 aa24.68■■□□□ 1.54
HOMER3-204ENST00000539827 EPHB6O15197 1021 aa24.68■■□□□ 1.54
HOMER3-204ENST00000539827 DKC1O60832 514 aaKnown RBP eCLIP24.68■■□□□ 1.54
HOMER3-204ENST00000539827 CCL15Q16663 113 aa24.68■■□□□ 1.54
HOMER3-204ENST00000539827 FRMD5Q7Z6J6 570 aa24.68■■□□□ 1.54
HOMER3-204ENST00000539827 MS4A4AQ96JQ5 239 aa24.68■■□□□ 1.54
HOMER3-204ENST00000539827 PNMA3Q9UL41 463 aa24.68■■□□□ 1.54
HOMER3-204ENST00000539827 PDHXO00330 501 aa24.67■■□□□ 1.54
HOMER3-204ENST00000539827 PPP1R37O75864 691 aa24.67■■□□□ 1.54
HOMER3-204ENST00000539827 CELF2O95319 508 aaKnown RBP24.67■■□□□ 1.54
HOMER3-204ENST00000539827 CETPP11597 493 aa24.67■■□□□ 1.54
HOMER3-204ENST00000539827 UBA1P22314 1058 aaKnown RBP24.67■■□□□ 1.54
HOMER3-204ENST00000539827 ZBED6P86452 979 aa24.67■■□□□ 1.54
HOMER3-204ENST00000539827 PRKCEQ02156 737 aa24.67■■□□□ 1.54
HOMER3-204ENST00000539827 TSR1Q2NL82 804 aaKnown RBP24.67■■□□□ 1.54
HOMER3-204ENST00000539827 FIGNQ5HY92 759 aa24.67■■□□□ 1.54
HOMER3-204ENST00000539827 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.67■■□□□ 1.54
HOMER3-204ENST00000539827 TIPINQ9BVW5 301 aa24.67■■□□□ 1.54
HOMER3-204ENST00000539827 ARMCX3Q9UH62 379 aaPredicted RBP24.67■■□□□ 1.54
HOMER3-204ENST00000539827 SEPT9Q9UHD8 586 aaPredicted RBP24.67■■□□□ 1.54
HOMER3-204ENST00000539827 BTBD19C9JJ37 291 aa24.67■■□□□ 1.54
HOMER3-204ENST00000539827 SYCP3Q8IZU3 236 aa24.67■■□□□ 1.54
HOMER3-204ENST00000539827 ZNF526Q8TF50 670 aaPredicted RBP24.67■■□□□ 1.54
HOMER3-204ENST00000539827 PRIMPOLQ96LW4 560 aa24.67■■□□□ 1.54
HOMER3-204ENST00000539827 DRC1Q96MC2 740 aa24.67■■□□□ 1.54
HOMER3-204ENST00000539827 PORCNQ9H237 461 aa24.67■■□□□ 1.54
HOMER3-204ENST00000539827 MROH8Q9H579 483 aa24.67■■□□□ 1.54
HOMER3-204ENST00000539827 EFCC1Q9HA90 598 aa24.67■■□□□ 1.54
HOMER3-204ENST00000539827 FAM184BQ9ULE4 1060 aa24.67■■□□□ 1.54
HOMER3-204ENST00000539827 ADGRG1Q9Y653 693 aa24.67■■□□□ 1.54
HOMER3-204ENST00000539827 SYNGAP1Q96PV0 1343 aa24.66■■□□□ 1.54
HOMER3-204ENST00000539827 A0A1W2PQJ5 194 aa24.66■■□□□ 1.54
HOMER3-204ENST00000539827 EPB41P11171 864 aaKnown RBP24.66■■□□□ 1.54
HOMER3-204ENST00000539827 GTF2A2P52657 109 aa24.66■■□□□ 1.54
HOMER3-204ENST00000539827 PEX3P56589 373 aa24.66■■□□□ 1.54
HOMER3-204ENST00000539827 KCNH2Q12809 1159 aa24.66■■□□□ 1.54
HOMER3-204ENST00000539827 WDR59Q6PJI9 974 aa24.66■■□□□ 1.54
HOMER3-204ENST00000539827 GBP3Q9H0R5 595 aa24.66■■□□□ 1.54
HOMER3-204ENST00000539827 MAPTP10636 758 aaKnown RBP24.65■■□□□ 1.54
HOMER3-204ENST00000539827 HS2ST1Q7LGA3 356 aa24.65■■□□□ 1.54
HOMER3-204ENST00000539827 C2orf69Q8N8R5 385 aa24.65■■□□□ 1.54
HOMER3-204ENST00000539827 BRI3BPQ8WY22 251 aa24.65■■□□□ 1.54
HOMER3-204ENST00000539827 AGPAT3Q9NRZ7 376 aa24.65■■□□□ 1.54
HOMER3-204ENST00000539827 DNAJC25-GNG10A0A024R161 153 aa24.65■■□□□ 1.54
HOMER3-204ENST00000539827 SLC16A3O15427 465 aaKnown RBP24.65■■□□□ 1.54
HOMER3-204ENST00000539827 ATG7O95352 703 aa24.65■■□□□ 1.54
HOMER3-204ENST00000539827 CCDC175P0C221 793 aa24.65■■□□□ 1.54
HOMER3-204ENST00000539827 SOX10P56693 466 aa24.65■■□□□ 1.54
HOMER3-204ENST00000539827 FKBP1BP68106 108 aa24.65■■□□□ 1.54
HOMER3-204ENST00000539827 ACRBPQ8NEB7 543 aa24.65■■□□□ 1.54
HOMER3-204ENST00000539827 ZNF397Q8NF99 534 aaPredicted RBP24.65■■□□□ 1.54
HOMER3-204ENST00000539827 NEK11Q8NG66 645 aa24.65■■□□□ 1.54
HOMER3-204ENST00000539827 CRACR2AQ9BSW2 395 aa24.65■■□□□ 1.54
HOMER3-204ENST00000539827 LSM14BQ9BX40 385 aaKnown RBP24.65■■□□□ 1.54
HOMER3-204ENST00000539827 ZNF302Q9NR11 478 aa24.65■■□□□ 1.54
HOMER3-204ENST00000539827 LRRC37A2A6NM11 1700 aa24.65■■□□□ 1.54
HOMER3-204ENST00000539827 IGSF9BQ9UPX0 1349 aa24.64■■□□□ 1.54
HOMER3-204ENST00000539827 KIF2AO00139 706 aaPredicted RBP24.64■■□□□ 1.54
HOMER3-204ENST00000539827 SLC16A4O15374 487 aa24.64■■□□□ 1.54
HOMER3-204ENST00000539827 CYP2J2P51589 502 aa24.64■■□□□ 1.54
HOMER3-204ENST00000539827 NFIL3Q16649 462 aa24.64■■□□□ 1.54
HOMER3-204ENST00000539827 LY6KQ17RY6 165 aa24.64■■□□□ 1.54
HOMER3-204ENST00000539827 SYT10Q6XYQ8 523 aa24.64■■□□□ 1.54
HOMER3-204ENST00000539827 IQCDQ96DY2 449 aa24.64■■□□□ 1.54
HOMER3-204ENST00000539827 A0A0U1RQJ8 604 aa24.63■■□□□ 1.53
HOMER3-204ENST00000539827 FARP2O94887 1054 aaPredicted RBP24.63■■□□□ 1.53
HOMER3-204ENST00000539827 ATP4AP20648 1035 aa24.63■■□□□ 1.53
HOMER3-204ENST00000539827 DCAF17Q5H9S7 520 aaPredicted RBP24.63■■□□□ 1.53
HOMER3-204ENST00000539827 HAUS6Q7Z4H7 955 aa24.63■■□□□ 1.53
HOMER3-204ENST00000539827 ANKRD13CQ8N6S4 541 aa24.63■■□□□ 1.53
HOMER3-204ENST00000539827 SHCBP1Q8NEM2 672 aa24.63■■□□□ 1.53
HOMER3-204ENST00000539827 GPRC5AQ8NFJ5 357 aa24.63■■□□□ 1.53
HOMER3-204ENST00000539827 ATRIPQ8WXE1 791 aa24.63■■□□□ 1.53
HOMER3-204ENST00000539827 ACCSQ96QU6 501 aa24.63■■□□□ 1.53
HOMER3-204ENST00000539827 MPHOSPH6Q99547 160 aaKnown RBP24.63■■□□□ 1.53
HOMER3-204ENST00000539827 METTL14Q9HCE5 456 aaKnown RBP24.63■■□□□ 1.53
HOMER3-204ENST00000539827 ZNFX1Q9P2E3 1918 aaKnown RBP24.63■■□□□ 1.53
HOMER3-204ENST00000539827 UQCRHLA0A096LP55 91 aa24.63■■□□□ 1.53
HOMER3-204ENST00000539827 GSTTP1A0A1W2PQM5 241 aa24.63■■□□□ 1.53
HOMER3-204ENST00000539827 RIOK3O14730 519 aaKnown RBP24.63■■□□□ 1.53
HOMER3-204ENST00000539827 UQCRHP07919 91 aa24.63■■□□□ 1.53
HOMER3-204ENST00000539827 MTERF2Q49AM1 385 aa24.63■■□□□ 1.53
HOMER3-204ENST00000539827 XKR3Q5GH77 459 aa24.63■■□□□ 1.53
HOMER3-204ENST00000539827 TRIM65Q6PJ69 517 aa24.63■■□□□ 1.53
HOMER3-204ENST00000539827 FAM186BQ8IYM0 893 aa24.63■■□□□ 1.53
HOMER3-204ENST00000539827 CYP26B1Q9NR63 512 aa24.63■■□□□ 1.53
HOMER3-204ENST00000539827 ZNHIT6Q9NWK9 470 aaKnown RBP24.63■■□□□ 1.53
HOMER3-204ENST00000539827 ARID2Q68CP9 1835 aa24.63■■□□□ 1.53
HOMER3-204ENST00000539827 CCDC169A6NNP5 214 aa24.62■■□□□ 1.53
HOMER3-204ENST00000539827 ARIH2O95376 493 aa24.62■■□□□ 1.53
HOMER3-204ENST00000539827 GGPS1O95749 300 aa24.62■■□□□ 1.53
HOMER3-204ENST00000539827 PSMC2P35998 433 aaKnown RBP24.62■■□□□ 1.53
HOMER3-204ENST00000539827 ALCAMQ13740 583 aa24.62■■□□□ 1.53
HOMER3-204ENST00000539827 NEDD9Q14511 834 aa24.62■■□□□ 1.53
HOMER3-204ENST00000539827 TCERG1LQ5VWI1 586 aa24.62■■□□□ 1.53
HOMER3-204ENST00000539827 GTF3C2Q8WUA4 911 aaPredicted RBP24.62■■□□□ 1.53
HOMER3-204ENST00000539827 DMAC2Q9NW81 257 aa24.62■■□□□ 1.53
HOMER3-204ENST00000539827 PAXBP1Q9Y5B6 917 aa24.62■■□□□ 1.53
HOMER3-204ENST00000539827 MYH9P35579 1960 aaKnown RBP24.62■■□□□ 1.53
HOMER3-204ENST00000539827 GOLGA6L9A6NEM1 432 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms