RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 LRRC15Q8TF66 581 aa17.15■□□□□ 0.34
DDB1-216ENST00000539739 MAP7D2Q96T17 732 aa17.15■□□□□ 0.34
DDB1-216ENST00000539739 TNMDQ9H2S6 317 aa17.15■□□□□ 0.34
DDB1-216ENST00000539739 BMP2KQ9NSY1 1161 aaPredicted RBP17.15■□□□□ 0.34
DDB1-216ENST00000539739 KCND2Q9NZV8 630 aa17.15■□□□□ 0.34
DDB1-216ENST00000539739 TUBE1Q9UJT0 475 aa17.15■□□□□ 0.34
DDB1-216ENST00000539739 NOD1Q9Y239 953 aa17.15■□□□□ 0.34
DDB1-216ENST00000539739 KAT6AQ92794 2004 aa17.15■□□□□ 0.34
DDB1-216ENST00000539739 ACTN4O43707 911 aaKnown RBP17.14■□□□□ 0.33
DDB1-216ENST00000539739 GAS2O43903 313 aaKnown RBP17.14■□□□□ 0.33
DDB1-216ENST00000539739 USO1O60763 962 aaKnown RBP17.14■□□□□ 0.33
DDB1-216ENST00000539739 MAFO75444 373 aaPredicted RBP17.14■□□□□ 0.33
DDB1-216ENST00000539739 MBD3O95983 291 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 TMOD1P28289 359 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 HOXC8P31273 242 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 CDK7P50613 346 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 LONRF3Q496Y0 759 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 C1orf53Q5VUE5 145 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 GDF6Q6KF10 455 aaPredicted RBP17.14■□□□□ 0.33
DDB1-216ENST00000539739 RINT1Q6NUQ1 792 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 MTHFD1LQ6UB35 978 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 KRBA2Q6ZNG9 492 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 GPBP1Q86WP2 473 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 CEP89Q96ST8 783 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 DHX33Q9H6R0 707 aaKnown RBP17.14■□□□□ 0.33
DDB1-216ENST00000539739 ATP6V0A4Q9HBG4 840 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 MBLAC1A4D2B0 266 aaPredicted RBP17.14■□□□□ 0.33
DDB1-216ENST00000539739 TLR3O15455 904 aaKnown RBP17.14■□□□□ 0.33
DDB1-216ENST00000539739 C22orf31O95567 290 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 CYP11B2P19099 503 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 DNM2P50570 870 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 SOX10P56693 466 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 ADAM17P78536 824 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 PTGISQ16647 500 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 MARCH8Q5T0T0 291 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 METTL13Q8N6R0 699 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 MCPH1Q8NEM0 835 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 TIGD1Q96MW7 591 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 MTRQ99707 1265 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 TIPINQ9BVW5 301 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 SUGCTQ9HAC7 445 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 KBTBD4Q9NVX7 518 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 DACT1Q9NYF0 836 aa17.14■□□□□ 0.33
DDB1-216ENST00000539739 HOOK1Q9UJC3 728 aaKnown RBP17.14■□□□□ 0.33
DDB1-216ENST00000539739 LOXHD1Q8IVV2 1947 aa17.13■□□□□ 0.33
DDB1-216ENST00000539739 TREHO43280 583 aa17.13■□□□□ 0.33
DDB1-216ENST00000539739 KRT18P05783 430 aaKnown RBP17.13■□□□□ 0.33
DDB1-216ENST00000539739 CYP2C9P11712 490 aa17.13■□□□□ 0.33
DDB1-216ENST00000539739 ZNF200P98182 395 aaPredicted RBP17.13■□□□□ 0.33
DDB1-216ENST00000539739 EMC2Q15006 297 aa17.13■□□□□ 0.33
DDB1-216ENST00000539739 EFCAB12Q6NXP0 572 aa17.13■□□□□ 0.33
DDB1-216ENST00000539739 TAF2Q6P1X5 1199 aa17.13■□□□□ 0.33
DDB1-216ENST00000539739 C1orf186Q6ZWK4 172 aa17.13■□□□□ 0.33
DDB1-216ENST00000539739 PCDHA2Q9Y5H9 948 aa17.13■□□□□ 0.33
DDB1-216ENST00000539739 IGKV6-21A0A0C4DH24 114 aa17.12■□□□□ 0.33
DDB1-216ENST00000539739 DCDC2CA8MYV0 355 aa17.12■□□□□ 0.33
DDB1-216ENST00000539739 AFMP43652 599 aa17.12■□□□□ 0.33
DDB1-216ENST00000539739 HIC1Q14526 733 aa17.12■□□□□ 0.33
DDB1-216ENST00000539739 SNX17Q15036 470 aa17.12■□□□□ 0.33
DDB1-216ENST00000539739 UBE2Q1Q7Z7E8 422 aa17.12■□□□□ 0.33
DDB1-216ENST00000539739 TCP11Q8WWU5 503 aa17.12■□□□□ 0.33
DDB1-216ENST00000539739 STAMQ92783 540 aa17.12■□□□□ 0.33
DDB1-216ENST00000539739 PAGE5Q96GU1 130 aa17.12■□□□□ 0.33
DDB1-216ENST00000539739 TOX2Q96NM4 488 aa17.12■□□□□ 0.33
DDB1-216ENST00000539739 RUSC1Q9BVN2 902 aa17.12■□□□□ 0.33
DDB1-216ENST00000539739 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
DDB1-216ENST00000539739 SMIM35A0A1B0GVV1 85 aa17.11■□□□□ 0.33
DDB1-216ENST00000539739 B4GALT4O60513 344 aa17.11■□□□□ 0.33
DDB1-216ENST00000539739 PQBP1O60828 265 aaKnown RBP17.11■□□□□ 0.33
DDB1-216ENST00000539739 RPLP2P05387 115 aaKnown RBP17.11■□□□□ 0.33
DDB1-216ENST00000539739 MYL1P05976 194 aa17.11■□□□□ 0.33
DDB1-216ENST00000539739 GUCY2CP25092 1073 aa17.11■□□□□ 0.33
DDB1-216ENST00000539739 NFKBIBQ15653 356 aa17.11■□□□□ 0.33
DDB1-216ENST00000539739 ARSHQ5FYA8 562 aa17.11■□□□□ 0.33
DDB1-216ENST00000539739 FAM102BQ5T8I3 360 aa17.11■□□□□ 0.33
DDB1-216ENST00000539739 IER5Q5VY09 327 aa17.11■□□□□ 0.33
DDB1-216ENST00000539739 MAEAQ7L5Y9 396 aa17.11■□□□□ 0.33
DDB1-216ENST00000539739 ANKRD33Q7Z3H0 272 aa17.11■□□□□ 0.33
DDB1-216ENST00000539739 RSPH3Q86UC2 560 aa17.11■□□□□ 0.33
DDB1-216ENST00000539739 LRRC71Q8N4P6 559 aa17.11■□□□□ 0.33
DDB1-216ENST00000539739 DDX12PQ92771 950 aa17.11■□□□□ 0.33
DDB1-216ENST00000539739 NAP1L5Q96NT1 182 aaPredicted RBP17.11■□□□□ 0.33
DDB1-216ENST00000539739 PDLIM7Q9NR12 457 aa17.11■□□□□ 0.33
DDB1-216ENST00000539739 TRMT13Q9NUP7 481 aaKnown RBP17.11■□□□□ 0.33
DDB1-216ENST00000539739 MYMKA6NI61 221 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 RTP1P59025 263 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 RAD51AP2Q09MP3 1159 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 PTK7Q13308 1070 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 TRIM60Q495X7 471 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 SERINC5Q86VE9 423 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 FAM126BQ8IXS8 530 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 ELOA2Q8IYF1 753 aaPredicted RBP17.1■□□□□ 0.33
DDB1-216ENST00000539739 GPT2Q8TD30 523 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 KIFAP3Q92845 792 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 ZBTB10Q96DT7 871 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 DRC1Q96MC2 740 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 C7orf25Q9BPX7 421 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 TRPV6Q9H1D0 765 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 XPNPEP1Q9NQW7 623 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 ATP11BQ9Y2G3 1177 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms