RNA–Protein interactions for RNA: ENST00000539271.5

LRTOMT-216, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4 BASIC

Gene LRTOMT, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-216ENST00000539271 CYP4A11Q02928 519 aa10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 CTTNQ14247 550 aaKnown RBP10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 MTERF2Q49AM1 385 aa10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 RILPL1Q5EBL4 403 aa10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 PLA2G4FQ68DD2 849 aa10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 EFCAB12Q6NXP0 572 aa10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 LRRC71Q8N4P6 559 aa10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 USP38Q8NB14 1042 aa10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 NEK9Q8TD19 979 aa10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 MAP7D2Q96T17 732 aa10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 SH2D3AQ9BRG2 576 aa10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 SEMA6BQ9H3T3 888 aa10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 CDHR5Q9HBB8 845 aa10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 CYP26B1Q9NR63 512 aa10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 PPME1Q9Y570 386 aa10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 PCDHB6Q9Y5E3 794 aa10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 CHD7Q9P2D1 2997 aa10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 CDH23Q9H251 3354 aa10.06□□□□□ -0.8
LRTOMT-216ENST00000539271 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 GPR32O75388 356 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 MAFO75444 373 aaPredicted RBP10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 GJB5O95377 273 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 VTNP04004 478 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 MYOGP15173 224 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 PDCP20941 246 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 CD52P31358 61 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 YWHABP31946 246 aaKnown RBP10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 TECP42680 631 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 FXR2P51116 673 aaKnown RBP eCLIP10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 CRYBB1P53674 252 aaPredicted RBP10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 NPEPPSP55786 919 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 PTGDRQ13258 359 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 KIZQ2M2Z5 673 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 TPH2Q8IWU9 490 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 ZNF710Q8N1W2 664 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 ZNF579Q8NAF0 562 aaKnown RBP10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 TMEM40Q8WWA1 233 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 GUCD1Q96NT3 240 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 NKX2-4Q9H2Z4 354 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 ADAMTS10Q9H324 1103 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 ZNF576Q9H609 170 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 SUGCTQ9HAC7 445 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 PADI3Q9ULW8 664 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 AKT3Q9Y243 479 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 GINS2Q9Y248 185 aa10.05□□□□□ -0.8
LRTOMT-216ENST00000539271 LAD1O00515 517 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 ZBTB39O15060 712 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 AMHP03971 560 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 SPATA31C1P0DKV0 1188 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 PRPHP41219 470 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 GPC3P51654 580 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 NLRP11P59045 1033 aaKnown RBP10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 PAK2Q13177 524 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 DRP2Q13474 957 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 TMEM266Q2M3C6 531 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 FAM43BQ6ZT52 329 aaPredicted RBP10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 OTUD6AQ7L8S5 288 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 BRAPQ7Z569 592 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 TMCO2Q7Z6W1 182 aaPredicted RBP10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 HSCBQ8IWL3 235 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 EXOC8Q8IYI6 725 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 MYOCDQ8IZQ8 938 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 ERMNQ8TAM6 284 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 LINC01599Q8WXQ3 324 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 CEP170P1Q96L14 293 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 FAM161BQ96MY7 647 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 PPP1R16BQ96T49 567 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 OSMRQ99650 979 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 JPH2Q9BR39 696 aaPredicted RBP10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 POLR3CQ9BUI4 534 aaPredicted RBP10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 FTHL17Q9BXU8 183 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 DHX33Q9H6R0 707 aaKnown RBP10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 ERVK-5Q9HDB9 667 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 TUFT1Q9NNX1 390 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 ANKEF1Q9NU02 776 aa10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 NOC2LQ9Y3T9 749 aaKnown RBP10.04□□□□□ -0.8
LRTOMT-216ENST00000539271 VPS37CA5D8V6 355 aaPredicted RBP10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 ENPP3O14638 875 aa10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 TLL1O43897 1013 aa10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 MED24O75448 989 aa10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 RPS6KA5O75582 802 aa10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 CA3P07451 260 aa10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 XRCC6P12956 609 aaKnown RBP eCLIP10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 SYT1P21579 422 aa10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 RPA1P27694 616 aa10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 RFC5P40937 340 aa10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 DNM2P50570 870 aa10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 POLGP54098 1239 aaPredicted RBP10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 ATP2C1P98194 919 aaPredicted RBP10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 CDC42EP1Q00587 391 aa10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 PDIA5Q14554 519 aa10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 XKR9Q5GH70 373 aa10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 FAM228AQ86W67 206 aa10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 CATSPER3Q86XQ3 398 aa10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 IGSF22Q8N9C0 903 aa10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 SPDYE1Q8NFV5 336 aaPredicted RBP10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 SLC7A3Q8WY07 619 aa10.03□□□□□ -0.8
LRTOMT-216ENST00000539271 TOP1MTQ969P6 601 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms