RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 BICD2Q8TD16 824 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 ATP8B4Q8TF62 1192 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 TMEM40Q8WWA1 233 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 LINC01599Q8WXQ3 324 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 EDAQ92838 391 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 CEP89Q96ST8 783 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 KCNMB3Q9NPA1 279 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 ZNF302Q9NR11 478 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 DISC1Q9NRI5 854 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 TUBE1Q9UJT0 475 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 VAV3Q9UKW4 847 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 ZNF215Q9UL58 517 aaPredicted RBP8.18□□□□□ -1.1
LMO3-220ENST00000539232 MAFBQ9Y5Q3 323 aaPredicted RBP8.18□□□□□ -1.1
LMO3-220ENST00000539232 NRCAMQ92823 1304 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 ZNF292O60281 2723 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 TMEM221A6NGB7 291 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 M0R296 226 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 GAS7O60861 476 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 CDKL5O76039 1030 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 C22orf31O95567 290 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 MMP1P03956 469 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 ATP2B1P20020 1258 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 CD52P31358 61 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 RFC2P35250 354 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 IRS1P35568 1242 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 CLCN3P51790 818 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 SPIRE1Q08AE8 756 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 NFKBIBQ15653 356 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 TMEM266Q2M3C6 531 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 PLEKHG4Q58EX7 1191 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 FAM26DQ5JW98 314 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 FBXO47Q5MNV8 452 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 LRCH2Q5VUJ6 765 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 ZNF746Q6NUN9 644 aaPredicted RBP8.17□□□□□ -1.1
LMO3-220ENST00000539232 MIS18BP1Q6P0N0 1132 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 CNKSR3Q6P9H4 555 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 MTHFD1LQ6UB35 978 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 KRT25Q7Z3Z0 450 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 DIS3L2Q8IYB7 885 aaKnown RBP8.17□□□□□ -1.1
LMO3-220ENST00000539232 TBC1D32Q96NH3 1257 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 TMEM60Q9H2L4 133 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 TMX1Q9H3N1 280 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 AZI2Q9H6S1 392 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 TBC1D22BQ9NU19 505 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 RGL1Q9NZL6 768 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 DDX25Q9UHL0 483 aaKnown RBP8.17□□□□□ -1.1
LMO3-220ENST00000539232 PCDHA10Q9Y5I2 948 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 CDY2AQ9Y6F7 541 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 WDR87Q6ZQQ6 2873 aa8.17□□□□□ -1.1
LMO3-220ENST00000539232 EP300Q09472 2414 aaPredicted RBP8.17□□□□□ -1.1
LMO3-220ENST00000539232 CCDC194A0A1B0GVG4 234 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 MGEA5O60502 916 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 CSDE1O75534 798 aaKnown RBP8.16□□□□□ -1.1
LMO3-220ENST00000539232 VTNP04004 478 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 KRT2P35908 639 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 NBL1P41271 181 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 GATMP50440 423 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 NUBP1P53384 320 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 MRPS6P82932 125 aaKnown RBP8.16□□□□□ -1.1
LMO3-220ENST00000539232 SETQ01105 290 aaPredicted RBP8.16□□□□□ -1.1
LMO3-220ENST00000539232 PRKCEQ02156 737 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 PLA2G4FQ68DD2 849 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 GALNT17Q6IS24 598 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 GPR179Q6PRD1 2367 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 TRIM67Q6ZTA4 783 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 NEK8Q86SG6 692 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 RPAINQ86UA6 219 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 LRRC71Q8N4P6 559 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 CCDC155Q8N6L0 562 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 LINC01465Q8N7H1 131 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 BANK1Q8NDB2 785 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 NEK9Q8TD19 979 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 TMX3Q96JJ7 454 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 RIT2Q99578 217 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 ZMYND15Q9H091 742 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 MUTYHQ9UIF7 546 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 IGSF9BQ9UPX0 1349 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 PCDHA2Q9Y5H9 948 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 ZFHX4Q86UP3 3567 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 DMXL1Q9Y485 3027 aa8.16□□□□□ -1.1
LMO3-220ENST00000539232 USP24Q9UPU5 2620 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 RRN3P2A6NIE6 340 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 WDR64B1ANS9 1081 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 H0Y858 1186 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 ENPP3O14638 875 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 HBP1O60381 514 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 CCNT1O60563 726 aaKnown RBP8.15□□□□□ -1.1
LMO3-220ENST00000539232 UPP2O95045 317 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 PSAPP07602 524 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 PFKMP08237 780 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 GNAT1P11488 350 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 FGFR4P22455 802 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 TOB1P50616 345 aaPredicted RBP8.15□□□□□ -1.1
LMO3-220ENST00000539232 NPEPPSP55786 919 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 KRT76Q01546 638 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 HSP90AA2PQ14568 343 aaPredicted RBP8.15□□□□□ -1.1
LMO3-220ENST00000539232 TARBP2Q15633 366 aaKnown RBP8.15□□□□□ -1.1
LMO3-220ENST00000539232 ST3GAL2Q16842 350 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 KIZQ2M2Z5 673 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 FAM160B1Q5W0V3 765 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms