RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 COL4A3BPQ9Y5P4 624 aa11.36□□□□□ -0.59
CLPB-210ENST00000539148 PVALEFA0A1B0GWK0 134 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 E9PMD0 336 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 HAS3O00219 553 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 GTPBP6O43824 516 aaPredicted RBP11.35□□□□□ -0.59
CLPB-210ENST00000539148 ZNF862O60290 1169 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 NR1I2O75469 434 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 TPM3P06753 285 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 INSRRP14616 1297 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 GAP43P17677 238 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 CYP11B2P19099 503 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 GUCY2CP25092 1073 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 PPP1R2P41236 205 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 SMTNP53814 917 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 ITGA7Q13683 1181 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 MXD4Q14582 209 aaPredicted RBP11.35□□□□□ -0.59
CLPB-210ENST00000539148 POSTNQ15063 836 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 GRIK4Q16099 956 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 E2F4Q16254 413 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 UGCGQ16739 394 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 LONRF3Q496Y0 759 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 FAM47CQ5HY64 1035 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 TMEM63BQ5T3F8 832 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 CCSAPQ6IQ19 270 aaPredicted RBP11.35□□□□□ -0.59
CLPB-210ENST00000539148 CNNM4Q6P4Q7 775 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 FAM43BQ6ZT52 329 aaPredicted RBP11.35□□□□□ -0.59
CLPB-210ENST00000539148 ANO5Q75V66 913 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 TRIM50Q86XT4 487 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 CCDC155Q8N6L0 562 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 IFT74Q96LB3 600 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 GSDMAQ96QA5 445 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 PCYT2Q99447 389 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 MTRQ99707 1265 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 CLSTN2Q9H4D0 955 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 SEL1LQ9UBV2 794 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 SERTAD1Q9UHV2 236 aa11.35□□□□□ -0.59
CLPB-210ENST00000539148 TRIP12Q14669 1992 aaPredicted RBP11.34□□□□□ -0.59
CLPB-210ENST00000539148 KIAA0100Q14667 2235 aaKnown RBP11.34□□□□□ -0.59
CLPB-210ENST00000539148 A0A1W2PQ45 241 aaPredicted RBP11.34□□□□□ -0.59
CLPB-210ENST00000539148 A0A1W2PQY0 241 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 M0QZ92 97 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 TNRC18O15417 2968 aaPredicted RBP11.34□□□□□ -0.59
CLPB-210ENST00000539148 ACTN4O43707 911 aaKnown RBP11.34□□□□□ -0.59
CLPB-210ENST00000539148 MAFO75444 373 aaPredicted RBP11.34□□□□□ -0.59
CLPB-210ENST00000539148 FAM13AO94988 1023 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 SMIM10L2AP0DMW4 78 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 SMIM10L2BP0DMW5 78 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 LIG1P18858 919 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 SLC12A3P55017 1021 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 ASIC1P78348 528 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 PSMD2Q13200 908 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 SNW1Q13573 536 aaKnown RBP11.34□□□□□ -0.59
CLPB-210ENST00000539148 TFDP1Q14186 410 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 DHX8Q14562 1220 aaKnown RBP11.34□□□□□ -0.59
CLPB-210ENST00000539148 MCM6Q14566 821 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 IER5Q5VY09 327 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 SASS6Q6UVJ0 657 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 TRMT1LQ7Z2T5 733 aaKnown RBP11.34□□□□□ -0.59
CLPB-210ENST00000539148 NECAB2Q7Z6G3 386 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 NME8Q8N427 588 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 SMARCE1Q969G3 411 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 C7orf25Q9BPX7 421 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 NAT10Q9H0A0 1025 aaKnown RBP11.34□□□□□ -0.59
CLPB-210ENST00000539148 RNPEPQ9H4A4 650 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 GOLPH3LQ9H4A5 285 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 TUBE1Q9UJT0 475 aa11.34□□□□□ -0.59
CLPB-210ENST00000539148 ARVCFO00192 962 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 USO1O60763 962 aaKnown RBP11.33□□□□□ -0.6
CLPB-210ENST00000539148 CAND2O75155 1236 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 IDEP14735 1019 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 KLRC1P26715 233 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 AFMP43652 599 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 RTP1P59025 263 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 PSMC6P62333 389 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 DMP1Q13316 513 aaPredicted RBP11.33□□□□□ -0.6
CLPB-210ENST00000539148 ALCAMQ13740 583 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 HSP90AA2PQ14568 343 aaPredicted RBP11.33□□□□□ -0.6
CLPB-210ENST00000539148 EMC2Q15006 297 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 TARBP2Q15633 366 aaKnown RBP11.33□□□□□ -0.6
CLPB-210ENST00000539148 NBPF20Q3BBV1 942 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 NAALADL2Q58DX5 795 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 ODR4Q5SWX8 454 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 RINT1Q6NUQ1 792 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 METTL13Q8N6R0 699 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 TRIML1Q8N9V2 468 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 PSPC1Q8WXF1 523 aaKnown RBP11.33□□□□□ -0.6
CLPB-210ENST00000539148 DDX12PQ92771 950 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 KAT2BQ92831 832 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 PAGE5Q96GU1 130 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 PDLIM2Q96JY6 352 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 TRIM9Q9C026 710 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 INO80BQ9C086 356 aaPredicted RBP11.33□□□□□ -0.6
CLPB-210ENST00000539148 RBSNQ9H1K0 784 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 DHX33Q9H6R0 707 aaKnown RBP11.33□□□□□ -0.6
CLPB-210ENST00000539148 BLOC1S4Q9NUP1 217 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 EXOC1Q9NV70 894 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 GTF2IRD1Q9UHL9 959 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 PCDHA2Q9Y5H9 948 aa11.33□□□□□ -0.6
CLPB-210ENST00000539148 SMIM35A0A1B0GVV1 85 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 MYADML2A6NDP7 307 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms