RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 HCFC2Q9Y5Z7 792 aa16.09■□□□□ 0.17
PBX3-212ENST00000538998 BACH1O14867 736 aa16.08■□□□□ 0.16
PBX3-212ENST00000538998 CALM1P0DP23 149 aa16.08■□□□□ 0.16
PBX3-212ENST00000538998 CALM2P0DP24 149 aa16.08■□□□□ 0.16
PBX3-212ENST00000538998 CALM3P0DP25 149 aa16.08■□□□□ 0.16
PBX3-212ENST00000538998 CLCN5P51795 746 aa16.08■□□□□ 0.16
PBX3-212ENST00000538998 ITGB3BPQ13352 177 aaPredicted RBP16.08■□□□□ 0.16
PBX3-212ENST00000538998 DSC3Q14574 896 aa16.08■□□□□ 0.16
PBX3-212ENST00000538998 KIZQ2M2Z5 673 aa16.08■□□□□ 0.16
PBX3-212ENST00000538998 CEP55Q53EZ4 464 aa16.08■□□□□ 0.16
PBX3-212ENST00000538998 ZNF484Q5JVG2 852 aa16.08■□□□□ 0.16
PBX3-212ENST00000538998 NFXL1Q6ZNB6 911 aa16.08■□□□□ 0.16
PBX3-212ENST00000538998 FAM228AQ86W67 206 aa16.08■□□□□ 0.16
PBX3-212ENST00000538998 ABI1Q8IZP0 508 aa16.08■□□□□ 0.16
PBX3-212ENST00000538998 TDRD5Q8NAT2 981 aaKnown RBP16.08■□□□□ 0.16
PBX3-212ENST00000538998 CYP2W1Q8TAV3 490 aa16.08■□□□□ 0.16
PBX3-212ENST00000538998 CASD1Q96PB1 797 aa16.08■□□□□ 0.16
PBX3-212ENST00000538998 OSMRQ99650 979 aa16.08■□□□□ 0.16
PBX3-212ENST00000538998 AGO4Q9HCK5 861 aaKnown RBP16.08■□□□□ 0.16
PBX3-212ENST00000538998 CDH22Q9UJ99 828 aa16.08■□□□□ 0.16
PBX3-212ENST00000538998 C2orf71A6NGG8 1288 aa16.07■□□□□ 0.16
PBX3-212ENST00000538998 CCDC69A6NI79 296 aa16.07■□□□□ 0.16
PBX3-212ENST00000538998 IGHDP01880 384 aa16.07■□□□□ 0.16
PBX3-212ENST00000538998 ARP10275 920 aa16.07■□□□□ 0.16
PBX3-212ENST00000538998 ID4P47928 161 aa16.07■□□□□ 0.16
PBX3-212ENST00000538998 BMS1Q14692 1282 aaKnown RBP16.07■□□□□ 0.16
PBX3-212ENST00000538998 ABHD15Q6UXT9 468 aa16.07■□□□□ 0.16
PBX3-212ENST00000538998 LRRC55Q6ZSA7 311 aa16.07■□□□□ 0.16
PBX3-212ENST00000538998 HEATR3Q7Z4Q2 680 aa16.07■□□□□ 0.16
PBX3-212ENST00000538998 FRMD5Q7Z6J6 570 aa16.07■□□□□ 0.16
PBX3-212ENST00000538998 ZDHHC14Q8IZN3 488 aa16.07■□□□□ 0.16
PBX3-212ENST00000538998 CMTR1Q8N1G2 835 aaKnown RBP16.07■□□□□ 0.16
PBX3-212ENST00000538998 PLCD3Q8N3E9 789 aa16.07■□□□□ 0.16
PBX3-212ENST00000538998 MRPL43Q8N983 215 aaKnown RBP16.07■□□□□ 0.16
PBX3-212ENST00000538998 LOXHD1Q8IVV2 1947 aa16.07■□□□□ 0.16
PBX3-212ENST00000538998 hCG_1642624A0A1W2PR95 340 aa16.06■□□□□ 0.16
PBX3-212ENST00000538998 ZBTB42B2RXF5 422 aa16.06■□□□□ 0.16
PBX3-212ENST00000538998 PRC1O43663 620 aa16.06■□□□□ 0.16
PBX3-212ENST00000538998 FOSP01100 380 aaPredicted RBP16.06■□□□□ 0.16
PBX3-212ENST00000538998 PBX3P40426 434 aa16.06■□□□□ 0.16
PBX3-212ENST00000538998 PDXDC2PQ6P474 469 aa16.06■□□□□ 0.16
PBX3-212ENST00000538998 CCDC60Q8IWA6 550 aaPredicted RBP16.06■□□□□ 0.16
PBX3-212ENST00000538998 PPP1R16BQ96T49 567 aa16.06■□□□□ 0.16
PBX3-212ENST00000538998 ZNF302Q9NR11 478 aa16.06■□□□□ 0.16
PBX3-212ENST00000538998 RNF19AQ9NV58 838 aa16.06■□□□□ 0.16
PBX3-212ENST00000538998 DZANK1Q9NVP4 752 aa16.06■□□□□ 0.16
PBX3-212ENST00000538998 USTQ9Y2C2 406 aa16.06■□□□□ 0.16
PBX3-212ENST00000538998 SPTBN4Q9H254 2564 aa16.05■□□□□ 0.16
PBX3-212ENST00000538998 PTPRZ1P23471 2315 aaPredicted RBP16.05■□□□□ 0.16
PBX3-212ENST00000538998 MEIS1O00470 390 aa16.05■□□□□ 0.16
PBX3-212ENST00000538998 CLASP2O75122 1294 aaKnown RBP16.05■□□□□ 0.16
PBX3-212ENST00000538998 GPR32O75388 356 aa16.05■□□□□ 0.16
PBX3-212ENST00000538998 C22orf31O95567 290 aa16.05■□□□□ 0.16
PBX3-212ENST00000538998 CCNE2O96020 404 aa16.05■□□□□ 0.16
PBX3-212ENST00000538998 ASGR2P07307 311 aa16.05■□□□□ 0.16
PBX3-212ENST00000538998 ZSCAN20P17040 1043 aaPredicted RBP16.05■□□□□ 0.16
PBX3-212ENST00000538998 KIAA1841Q6NSI8 718 aa16.05■□□□□ 0.16
PBX3-212ENST00000538998 ADSSL1Q8N142 457 aa16.05■□□□□ 0.16
PBX3-212ENST00000538998 SLC39A11Q8N1S5 342 aa16.05■□□□□ 0.16
PBX3-212ENST00000538998 BBXQ8WY36 941 aaPredicted RBP16.05■□□□□ 0.16
PBX3-212ENST00000538998 TMEM87BQ96K49 555 aa16.05■□□□□ 0.16
PBX3-212ENST00000538998 SMOC2Q9H3U7 446 aa16.05■□□□□ 0.16
PBX3-212ENST00000538998 DBR1Q9UK59 544 aaKnown RBP16.05■□□□□ 0.16
PBX3-212ENST00000538998 DDX39AO00148 427 aaKnown RBP16.04■□□□□ 0.16
PBX3-212ENST00000538998 SH2B2O14492 632 aaPredicted RBP16.04■□□□□ 0.16
PBX3-212ENST00000538998 VTNP04004 478 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 GSPT1P15170 499 aaKnown RBP16.04■□□□□ 0.16
PBX3-212ENST00000538998 RXRAP19793 462 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 CHMLP26374 656 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 MCM5P33992 734 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 CA8P35219 290 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 LIFRP42702 1097 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 ATAT1Q5SQI0 421 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 RARS2Q5T160 578 aaKnown RBP16.04■□□□□ 0.16
PBX3-212ENST00000538998 TTC22Q5TAA0 569 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 PPP1R18Q6NYC8 613 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 MIS18BP1Q6P0N0 1132 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 TMTC3Q6ZXV5 915 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 NIPA1Q7RTP0 329 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 ECHDC2Q86YB7 292 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 CKAP2LQ8IYA6 745 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 ZNF710Q8N1W2 664 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 CCDC82Q8N4S0 544 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 METTL13Q8N6R0 699 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 MRPL9Q9BYD2 267 aaKnown RBP16.04■□□□□ 0.16
PBX3-212ENST00000538998 ANO3Q9BYT9 981 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 RIC8AQ9NPQ8 531 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 LIMD1Q9UGP4 676 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 DMDP11532 3685 aa16.04■□□□□ 0.16
PBX3-212ENST00000538998 SGSM2O43147 1006 aa16.03■□□□□ 0.16
PBX3-212ENST00000538998 EOMESO95936 686 aa16.03■□□□□ 0.16
PBX3-212ENST00000538998 WEE2P0C1S8 567 aa16.03■□□□□ 0.16
PBX3-212ENST00000538998 SREBF1P36956 1147 aa16.03■□□□□ 0.16
PBX3-212ENST00000538998 ALDH7A1P49419 539 aaKnown RBP16.03■□□□□ 0.16
PBX3-212ENST00000538998 NAPAP54920 295 aa16.03■□□□□ 0.16
PBX3-212ENST00000538998 CWF19L1Q69YN2 538 aaKnown RBP16.03■□□□□ 0.16
PBX3-212ENST00000538998 WWC2Q6AWC2 1192 aa16.03■□□□□ 0.16
PBX3-212ENST00000538998 SWSAP1Q6NVH7 229 aa16.03■□□□□ 0.16
PBX3-212ENST00000538998 TMEM87AQ8NBN3 555 aa16.03■□□□□ 0.16
PBX3-212ENST00000538998 RNF169Q8NCN4 708 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms