RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 NCLNQ969V3 563 aa15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 hCG_1984214I3L0E3 225 aa15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 SPARCL1Q14515 664 aa15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 TRMT2AQ8IZ69 625 aaKnown RBP15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 ZNF713Q8N859 430 aaPredicted RBP15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 CPVLQ9H3G5 476 aa15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 ZNF233A6NK53 670 aa15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 WDR64B1ANS9 1081 aa15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 MAGOHP61326 146 aaKnown RBP15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 RASGRF1Q13972 1273 aa15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 RGS9BPQ6ZS82 235 aa15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 TTC1Q99614 292 aa15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 CENPKQ9BS16 269 aa15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 TMEM94Q12767 1356 aa15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 NEDD4P46934 1319 aa15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 TJP3O95049 919 aa15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 SERPINB2P05120 415 aa15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 CYP2D6P10635 497 aa15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 EPM2AIP1Q7L775 607 aaPredicted RBP15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 RNF139Q8WU17 664 aa15.19■□□□□ 0.02
PLXNB3-209ENST00000538966 NFRKBQ6P4R8 1299 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 EMBQ6PCB8 327 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 ADD3Q9UEY8 706 aaKnown RBP15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 ESYT3A0FGR9 886 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 THNSL1Q8IYQ7 743 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 HDAC6Q9UBN7 1215 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 CNOT8Q9UFF9 292 aaKnown RBP15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 ZFP69BQ9UJL9 534 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 SCINQ9Y6U3 715 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 PRDM15P57071 1507 aaPredicted RBP15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 USP27XA6NNY8 438 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 DCTN3O75935 186 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 NPR1P16066 1061 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 TOB2Q14106 344 aaPredicted RBP15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 SRRM1Q8IYB3 904 aaKnown RBP15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 POLR3CQ9BUI4 534 aaPredicted RBP15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 TRPV6Q9H1D0 765 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 UPF3AQ9H1J1 476 aaKnown RBP15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 USP6P35125 1406 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 ATICP31939 592 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 ARHGDIAP52565 204 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 PPP1R2P3Q6NXS1 205 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 HEY1Q9Y5J3 304 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 CHEK2O96017 543 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 NLRP10Q86W26 655 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 TRIM55Q9BYV6 548 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 NOP53Q9NZM5 478 aaKnown RBP15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 ADAM21Q9UKJ8 722 aa15.18■□□□□ 0.02
PLXNB3-209ENST00000538966 ANXA13P27216 316 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 TERF2Q15554 542 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 LRRC23Q53EV4 343 aaPredicted RBP15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 KIAA1841Q6NSI8 718 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 RHOT2Q8IXI1 618 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 TSC22D3Q99576 134 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 GTSE1Q9NYZ3 720 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 K7ERI5 159 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 SSTR3P32745 418 aaPredicted RBP15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 DSTYKQ6XUX3 929 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 OXER1Q8TDS5 423 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 SH3RF3Q8TEJ3 882 aaPredicted RBP15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 DCTN4Q9UJW0 460 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 IL6STP40189 918 aaPredicted RBP15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 PRCPP42785 496 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 GCLMP48507 274 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 RFX8Q6ZV50 586 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 SFR1Q86XK3 245 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 WDR17Q8IZU2 1322 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 USP17L5A8MUK1 530 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 NOP14P78316 857 aaKnown RBP15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 NAA30Q147X3 362 aaPredicted RBP15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 CC2D1AQ6P1N0 951 aaPredicted RBP15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 TTC30BQ8N4P2 665 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 NRBF2Q96F24 287 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 VPS11Q9H270 941 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 ADAM22Q9P0K1 906 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 GLE1Q53GS7 698 aaKnown RBP15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 SLC27A3Q5K4L6 730 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 CC2D2BQ6DHV5 1058 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 FAM196AQ6ZSG2 479 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 CYB5R4Q7L1T6 521 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 MTRQ99707 1265 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 TRIM15Q9C019 465 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 KLC2Q9H0B6 622 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 CEP72Q9P209 647 aa15.17■□□□□ 0.02
PLXNB3-209ENST00000538966 ARL4CP56559 192 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 CCNA1P78396 465 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 ACTN3Q08043 901 aaPredicted RBP15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 LRRC14Q15048 493 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 TAF1BQ53T94 588 aaPredicted RBP15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 SZRD1Q7Z422 152 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 TBC1D10CQ8IV04 446 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 TSR3Q9UJK0 312 aaKnown RBP15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 ITM2BQ9Y287 266 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 HNRNPCL2B2RXH8 293 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 PODXLO00592 558 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 HNRNPCL1O60812 293 aaKnown RBP15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 PMS2P54278 862 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 EXOC8Q8IYI6 725 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms