RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 PPARGC1AQ9UBK2 798 aaKnown RBP10.64□□□□□ -0.71
COL4A6-208ENST00000538570 L3MBTL1Q9Y468 752 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 APBA3O96018 575 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 CYP21A2P08686 494 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 PLCG1P19174 1290 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 FLAD1Q8NFF5 587 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 TTC17Q96AE7 1141 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 SAYSD1Q9NPB0 183 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 MRPL40Q9NQ50 206 aaKnown RBP10.64□□□□□ -0.71
COL4A6-208ENST00000538570 LMCD1Q9NZU5 365 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 APOBEC2Q9Y235 224 aaKnown RBP10.64□□□□□ -0.71
COL4A6-208ENST00000538570 MYOM2P54296 1465 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 XDHP47989 1333 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 SYCE1LA8MT33 242 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 CCDC144BQ3MJ40 725 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 CC2D1AQ6P1N0 951 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-208ENST00000538570 HIPK4Q8NE63 616 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 SNRNP27Q8WVK2 155 aaKnown RBP10.64□□□□□ -0.71
COL4A6-208ENST00000538570 CASP10Q92851 521 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 GFM2Q969S9 779 aaKnown RBP10.64□□□□□ -0.71
COL4A6-208ENST00000538570 DIABLOQ9NR28 239 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 DNAJC17Q9NVM6 304 aaKnown RBP10.64□□□□□ -0.71
COL4A6-208ENST00000538570 SLC8A2Q9UPR5 921 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 PYGLP06737 847 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 PSMA2P25787 234 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 DPY19L2Q6NUT2 758 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 ACAD11Q709F0 780 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 ERICH1Q86X53 443 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 TTLL11Q8NHH1 800 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 DDX17Q92841 729 aaKnown RBP10.64□□□□□ -0.71
COL4A6-208ENST00000538570 SH3GL1Q99961 368 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 STOML1Q9UBI4 398 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 LEMD3Q9Y2U8 911 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 RNF123Q5XPI4 1314 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 SH2B2O14492 632 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-208ENST00000538570 PRPF3O43395 683 aaKnown RBP10.64□□□□□ -0.71
COL4A6-208ENST00000538570 E2F6O75461 281 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 FGGP02679 453 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 PAPOLAP51003 745 aaKnown RBP10.64□□□□□ -0.71
COL4A6-208ENST00000538570 ARL4CP56559 192 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 RPF1Q9H9Y2 349 aaKnown RBP10.64□□□□□ -0.71
COL4A6-208ENST00000538570 BCS1LQ9Y276 419 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 PSAPP07602 524 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 SCP2P22307 547 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 MTERF2Q49AM1 385 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 ALKBH8Q96BT7 664 aaKnown RBP10.63□□□□□ -0.71
COL4A6-208ENST00000538570 TRPV6Q9H1D0 765 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 RHOBTB1O94844 696 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 ADD2P35612 726 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 SLC16A2P36021 539 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 STAT2P52630 851 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 TEDDM1Q5T9Z0 273 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 SYDE2Q5VT97 1194 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 SCARA5Q6ZMJ2 495 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 FRA10AC1Q70Z53 315 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 ETAA1Q9NY74 926 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 KPNA7A9QM74 516 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 TRIM66O15016 1216 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 CTIFO43310 598 aaKnown RBP10.63□□□□□ -0.71
COL4A6-208ENST00000538570 MFAP3LO75121 409 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 ZNF18P17022 549 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 ARPP19P56211 112 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 CYP27A1Q02318 531 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 RINLQ6ZS11 566 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 IL17REQ8NFR9 667 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 THOC1Q96FV9 657 aaKnown RBP10.63□□□□□ -0.71
COL4A6-208ENST00000538570 ING2Q9H160 280 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 KANSL2Q9H9L4 492 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 SLAIN2Q9P270 581 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 ZFP69BQ9UJL9 534 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 SNX5Q9Y5X3 404 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 KDM5AP29375 1690 aaKnown RBP10.63□□□□□ -0.71
COL4A6-208ENST00000538570 A0A087WWV3 80 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 E9PMD0 336 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 SNUPNO95149 360 aaKnown RBP10.63□□□□□ -0.71
COL4A6-208ENST00000538570 BMP3P12645 472 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 FOXD4Q12950 439 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-208ENST00000538570 NR5A1Q13285 461 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 DRP2Q13474 957 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 KRT33BQ14525 404 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 ALKBH5Q6P6C2 394 aaKnown RBP10.63□□□□□ -0.71
COL4A6-208ENST00000538570 ZNF589Q86UQ0 364 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-208ENST00000538570 SNX19Q92543 992 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 WARS2Q9UGM6 360 aaKnown RBP10.63□□□□□ -0.71
COL4A6-208ENST00000538570 SYNGAP1Q96PV0 1343 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 ARHGAP10A1A4S6 786 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 NR1H3Q13133 447 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 NDUFAF2Q8N183 169 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 SIX5Q8N196 739 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 COA7Q96BR5 231 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 TRIM33Q9UPN9 1127 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 INPP5FQ9Y2H2 1132 aa10.63□□□□□ -0.71
COL4A6-208ENST00000538570 PPEF1O14829 653 aaPredicted RBP10.62□□□□□ -0.71
COL4A6-208ENST00000538570 OSTNP61366 133 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 DYNLL1P63167 89 aaKnown RBP10.62□□□□□ -0.71
COL4A6-208ENST00000538570 HABP4Q5JVS0 413 aaKnown RBP10.62□□□□□ -0.71
COL4A6-208ENST00000538570 KIAA1841Q6NSI8 718 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 KRT27Q7Z3Y8 459 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 CNKSR1Q969H4 720 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 TEX12Q9BXU0 123 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms