RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 TGFB1I1O43294 461 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 HIP1RO75146 1068 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 PPP1R37O75864 691 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 AKAP3O75969 853 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 PLEKP08567 350 aaPredicted RBP7.25□□□□□ -1.25
USP28-206ENST00000538224 RSPH10BP0C881 870 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 ARP10275 920 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 ZSCAN20P17040 1043 aaPredicted RBP7.25□□□□□ -1.25
USP28-206ENST00000538224 TAL1P17542 331 aaPredicted RBP7.25□□□□□ -1.25
USP28-206ENST00000538224 PON1P27169 355 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 INPP5BP32019 993 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 HOXD13P35453 343 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 STAT1P42224 750 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 GMPSP49915 693 aaPredicted RBP7.25□□□□□ -1.25
USP28-206ENST00000538224 BACE1P56817 501 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 PSMC5P62195 406 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 CYP27A1Q02318 531 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 LONRF2Q1L5Z9 754 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 GLE1Q53GS7 698 aaKnown RBP7.25□□□□□ -1.25
USP28-206ENST00000538224 KLHDC7AQ5VTJ3 777 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 ZNF746Q6NUN9 644 aaPredicted RBP7.25□□□□□ -1.25
USP28-206ENST00000538224 SAMD1Q6SPF0 538 aaPredicted RBP7.25□□□□□ -1.25
USP28-206ENST00000538224 PADI6Q6TGC4 694 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 RNF207Q6ZRF8 634 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 INTS8Q75QN2 995 aaKnown RBP7.25□□□□□ -1.25
USP28-206ENST00000538224 ZNF720Q7Z2F6 126 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 USP37Q86T82 979 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 NLRX1Q86UT6 975 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 MICALL2Q8IY33 904 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 C4orf19Q8IY42 314 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 SYCP3Q8IZU3 236 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 SYTL5Q8TDW5 730 aaPredicted RBP7.25□□□□□ -1.25
USP28-206ENST00000538224 LMBR1Q8WVP7 490 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 TBC1D5Q92609 795 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 SLC35C1Q96A29 364 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 GPRASP2Q96D09 838 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 AGBL1Q96MI9 1066 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 UIMC1Q96RL1 719 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 GLIS2Q9BZE0 524 aaPredicted RBP7.25□□□□□ -1.25
USP28-206ENST00000538224 LACRTQ9GZZ8 138 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 RPAP3Q9H6T3 665 aaPredicted RBP7.25□□□□□ -1.25
USP28-206ENST00000538224 C17orf75Q9HAS0 396 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 AGPAT3Q9NRZ7 376 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 DMAC2Q9NW81 257 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 KCNG1Q9UIX4 513 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 HACL1Q9UJ83 578 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 ZNF112Q9UJU3 913 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 EXOC7Q9UPT5 735 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 SAMM50Q9Y512 469 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 OTOFQ9HC10 1997 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 SSC5DA1L4H1 1573 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 A0A0A6YYK5 440 aaPredicted RBP7.24□□□□□ -1.25
USP28-206ENST00000538224 RCCD1A6NED2 376 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 FZD9O00144 591 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 ENC1O14682 589 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 ATP2A1O14983 1001 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 NKRFO15226 690 aaKnown RBP eCLIP7.24□□□□□ -1.25
USP28-206ENST00000538224 EXOC3O60645 756 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 CLSTN1O94985 981 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 TBC1D8O95759 1140 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 ABL1P00519 1130 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 RHOXF2BP0C7M4 288 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 PLS3P13797 630 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 ITGB5P18084 799 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 LMNB1P20700 586 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 NMT1P30419 496 aaKnown RBP7.24□□□□□ -1.25
USP28-206ENST00000538224 RARRES1P49788 294 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 NAP1L1P55209 391 aaKnown RBP7.24□□□□□ -1.25
USP28-206ENST00000538224 JAM2P57087 298 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 RPS6P62753 249 aaKnown RBP7.24□□□□□ -1.25
USP28-206ENST00000538224 UBXN2AP68543 259 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 MYL7Q01449 175 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 GFPT1Q06210 699 aaPredicted RBP7.24□□□□□ -1.25
USP28-206ENST00000538224 ENPEPQ07075 957 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 DMTNQ08495 405 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 BFSP1Q12934 665 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 MTMR2Q13614 643 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 PGM5Q15124 567 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 NAB2Q15742 525 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 GNPTABQ3T906 1256 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 CFAP221Q4G0U5 840 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 NOL9Q5SY16 702 aaKnown RBP7.24□□□□□ -1.25
USP28-206ENST00000538224 ARHGEF16Q5VV41 709 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 OTUD6AQ7L8S5 288 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 DEFB132Q7Z7B7 95 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 CDAN1Q8IWY9 1227 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 SYCE1Q8N0S2 351 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 MMGT1Q8N4V1 131 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 FAM133AQ8N9E0 248 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 ZNF280CQ8ND82 737 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 BANK1Q8NDB2 785 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 TAF4BQ92750 862 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 KIFAP3Q92845 792 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 ATP6V0A1Q93050 837 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 BORCS6Q96GS4 357 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 TRERF1Q96PN7 1200 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 OSBPL9Q96SU4 736 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 RMDN3Q96TC7 470 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 SENP7Q9BQF6 1050 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 RHOXF2Q9BQY4 288 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms