RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 FAM196AQ6ZSG2 479 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 SLC35G2Q8TBE7 412 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 ALG3Q92685 438 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 LRRC4BQ9NT99 713 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 SERPINB13Q9UIV8 391 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 BTAF1O14981 1849 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 IBSPP21815 317 aaPredicted RBP15.35■□□□□ 0.05
CLPB-209ENST00000538039 PRKCIP41743 596 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 JAG1P78504 1218 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 USH1GQ495M9 461 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 SWT1Q5T5J6 900 aaKnown RBP15.35■□□□□ 0.05
CLPB-209ENST00000538039 SAMD1Q6SPF0 538 aaPredicted RBP15.35■□□□□ 0.05
CLPB-209ENST00000538039 FRMD5Q7Z6J6 570 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 ATP8A1Q9Y2Q0 1164 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 GMNCA6NCL1 334 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 F8VZ95 297 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 C6orf229H3BNL8 230 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 CAND2O75155 1236 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 ATP2C2O75185 946 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 XRCC5P13010 732 aaKnown RBP15.35■□□□□ 0.05
CLPB-209ENST00000538039 MARCKSL1P49006 195 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 SYT2Q8N9I0 419 aaPredicted RBP15.35■□□□□ 0.05
CLPB-209ENST00000538039 C1orf131Q8NDD1 294 aaKnown RBP15.35■□□□□ 0.05
CLPB-209ENST00000538039 PBKQ96KB5 322 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 JPH2Q9BR39 696 aaPredicted RBP15.35■□□□□ 0.05
CLPB-209ENST00000538039 ZNF831Q5JPB2 1677 aa15.35■□□□□ 0.05
CLPB-209ENST00000538039 RASSF9O75901 435 aa15.34■□□□□ 0.05
CLPB-209ENST00000538039 ARHGAP4P98171 946 aa15.34■□□□□ 0.05
CLPB-209ENST00000538039 MBOAT7Q96N66 472 aa15.34■□□□□ 0.05
CLPB-209ENST00000538039 TXLNGYQ9BZA5 131 aa15.34■□□□□ 0.05
CLPB-209ENST00000538039 VCPKMTQ9H867 229 aa15.34■□□□□ 0.05
CLPB-209ENST00000538039 USP40Q9NVE5 1235 aa15.34■□□□□ 0.05
CLPB-209ENST00000538039 TMOD4Q9NZQ9 345 aa15.34■□□□□ 0.05
CLPB-209ENST00000538039 NBPF9Q3BBW0 867 aa15.34■□□□□ 0.05
CLPB-209ENST00000538039 LRIG3Q6UXM1 1119 aa15.34■□□□□ 0.05
CLPB-209ENST00000538039 UHMK1Q8TAS1 419 aaKnown RBP15.34■□□□□ 0.05
CLPB-209ENST00000538039 SEC14L1Q92503 715 aa15.34■□□□□ 0.05
CLPB-209ENST00000538039 SYT11Q9BT88 431 aa15.34■□□□□ 0.05
CLPB-209ENST00000538039 PNMA2Q9UL42 364 aa15.34■□□□□ 0.05
CLPB-209ENST00000538039 MYO3BQ8WXR4 1341 aa15.34■□□□□ 0.05
CLPB-209ENST00000538039 KDM3AQ9Y4C1 1321 aa15.34■□□□□ 0.05
CLPB-209ENST00000538039 KIF13BQ9NQT8 1826 aa15.34■□□□□ 0.05
CLPB-209ENST00000538039 CYP3A7-CYP3A51PA0A087WV96 503 aa15.33■□□□□ 0.05
CLPB-209ENST00000538039 CES2O00748 559 aa15.33■□□□□ 0.05
CLPB-209ENST00000538039 MSH4O15457 936 aa15.33■□□□□ 0.05
CLPB-209ENST00000538039 GCNT3O95395 438 aa15.33■□□□□ 0.05
CLPB-209ENST00000538039 TRIM49P0CI25 452 aa15.33■□□□□ 0.05
CLPB-209ENST00000538039 TRIM49CP0CI26 452 aa15.33■□□□□ 0.05
CLPB-209ENST00000538039 EEF2P13639 858 aaKnown RBP15.33■□□□□ 0.05
CLPB-209ENST00000538039 CYP3A7P24462 503 aa15.33■□□□□ 0.05
CLPB-209ENST00000538039 TCP10Q12799 353 aa15.33■□□□□ 0.05
CLPB-209ENST00000538039 CUL1Q13616 776 aa15.33■□□□□ 0.05
CLPB-209ENST00000538039 CTTNQ14247 550 aaKnown RBP15.33■□□□□ 0.05
CLPB-209ENST00000538039 CDC42EP5Q6NZY7 148 aa15.33■□□□□ 0.05
CLPB-209ENST00000538039 GPATCH11Q8N954 259 aa15.33■□□□□ 0.05
CLPB-209ENST00000538039 RPGRQ92834 1020 aaKnown RBP15.33■□□□□ 0.05
CLPB-209ENST00000538039 SEC16BQ96JE7 1060 aa15.33■□□□□ 0.05
CLPB-209ENST00000538039 CEP89Q96ST8 783 aa15.33■□□□□ 0.05
CLPB-209ENST00000538039 WRAP73Q9P2S5 460 aaPredicted RBP15.33■□□□□ 0.05
CLPB-209ENST00000538039 ATXN2Q99700 1313 aaKnown RBP15.33■□□□□ 0.05
CLPB-209ENST00000538039 KIAA0754O94854 1291 aa15.33■□□□□ 0.04
CLPB-209ENST00000538039 H2AFZP0C0S5 128 aa15.33■□□□□ 0.04
CLPB-209ENST00000538039 PLCG2P16885 1265 aa15.33■□□□□ 0.04
CLPB-209ENST00000538039 PPATQ06203 517 aa15.33■□□□□ 0.04
CLPB-209ENST00000538039 DOK7Q18PE1 504 aa15.33■□□□□ 0.04
CLPB-209ENST00000538039 CRY2Q49AN0 593 aa15.33■□□□□ 0.04
CLPB-209ENST00000538039 H2AFVQ71UI9 128 aa15.33■□□□□ 0.04
CLPB-209ENST00000538039 BANK1Q8NDB2 785 aa15.33■□□□□ 0.04
CLPB-209ENST00000538039 RNF25Q96BH1 459 aaPredicted RBP15.33■□□□□ 0.04
CLPB-209ENST00000538039 THAP2Q9H0W7 228 aa15.33■□□□□ 0.04
CLPB-209ENST00000538039 ADAM7Q9H2U9 754 aa15.33■□□□□ 0.04
CLPB-209ENST00000538039 SLC40A1Q9NP59 571 aa15.33■□□□□ 0.04
CLPB-209ENST00000538039 LUC7LQ9NQ29 371 aaKnown RBP15.33■□□□□ 0.04
CLPB-209ENST00000538039 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.33■□□□□ 0.041e-6■■■■■ 250.4
CLPB-209ENST00000538039 ZDHHC18Q9NUE0 388 aa15.33■□□□□ 0.04
CLPB-209ENST00000538039 SUCLA2Q9P2R7 463 aaPredicted RBP15.33■□□□□ 0.04
CLPB-209ENST00000538039 VAV3Q9UKW4 847 aa15.33■□□□□ 0.04
CLPB-209ENST00000538039 FOXO6A8MYZ6 492 aa15.32■□□□□ 0.04
CLPB-209ENST00000538039 H0YHG0 523 aa15.32■□□□□ 0.04
CLPB-209ENST00000538039 PPP2R2AP63151 447 aa15.32■□□□□ 0.04
CLPB-209ENST00000538039 PRPF4BQ13523 1007 aaKnown RBP15.32■□□□□ 0.04
CLPB-209ENST00000538039 PPP1R18Q6NYC8 613 aa15.32■□□□□ 0.04
CLPB-209ENST00000538039 YTHDF3Q7Z739 585 aaKnown RBP15.32■□□□□ 0.04
CLPB-209ENST00000538039 ZSWIM2Q8NEG5 633 aa15.32■□□□□ 0.04
CLPB-209ENST00000538039 PITPNM2Q9BZ72 1349 aa15.32■□□□□ 0.04
CLPB-209ENST00000538039 TISP43B9A030 160 aa15.32■□□□□ 0.04
CLPB-209ENST00000538039 GCFC2P16383 781 aaKnown RBP15.32■□□□□ 0.04
CLPB-209ENST00000538039 IFI35P80217 286 aaPredicted RBP15.32■□□□□ 0.04
CLPB-209ENST00000538039 LLGL1Q15334 1064 aa15.32■□□□□ 0.04
CLPB-209ENST00000538039 ZKSCAN4Q969J2 545 aaPredicted RBP15.32■□□□□ 0.04
CLPB-209ENST00000538039 CABS1Q96KC9 395 aa15.32■□□□□ 0.04
CLPB-209ENST00000538039 ACP6Q9NPH0 428 aa15.32■□□□□ 0.04
CLPB-209ENST00000538039 HAUS2Q9NVX0 235 aa15.32■□□□□ 0.04
CLPB-209ENST00000538039 TCRBV7S2A1N4TA0A589 114 aa15.32■□□□□ 0.04
CLPB-209ENST00000538039 DDTLA6NHG4 134 aaPredicted RBP15.32■□□□□ 0.04
CLPB-209ENST00000538039 PDXKO00764 312 aa15.32■□□□□ 0.04
CLPB-209ENST00000538039 RPA1P27694 616 aa15.32■□□□□ 0.04
CLPB-209ENST00000538039 DRAP1Q14919 205 aaPredicted RBP15.32■□□□□ 0.04
CLPB-209ENST00000538039 KRT71Q3SY84 523 aa15.32■□□□□ 0.04
CLPB-209ENST00000538039 ODF2Q5BJF6 829 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms