RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 MDM2Q00987 491 aaPredicted RBP26.95■■□□□ 1.91
HMGA2-208ENST00000537429 PTPN11Q06124 597 aaPredicted RBP26.95■■□□□ 1.91
HMGA2-208ENST00000537429 TBC1D8BQ0IIM8 1120 aa26.95■■□□□ 1.91
HMGA2-208ENST00000537429 GRAMD1CQ8IYS0 662 aa26.95■■□□□ 1.91
HMGA2-208ENST00000537429 LRRC27Q9C0I9 530 aa26.95■■□□□ 1.91
HMGA2-208ENST00000537429 IGKV6-21A0A0C4DH24 114 aa26.95■■□□□ 1.9
HMGA2-208ENST00000537429 MBLAC1A4D2B0 266 aaPredicted RBP26.95■■□□□ 1.9
HMGA2-208ENST00000537429 CCDC85CA6NKD9 419 aa26.95■■□□□ 1.9
HMGA2-208ENST00000537429 C22orf31O95567 290 aa26.95■■□□□ 1.9
HMGA2-208ENST00000537429 GNAT1P11488 350 aa26.95■■□□□ 1.9
HMGA2-208ENST00000537429 POLGP54098 1239 aaPredicted RBP26.95■■□□□ 1.9
HMGA2-208ENST00000537429 EXOC8Q8IYI6 725 aa26.95■■□□□ 1.9
HMGA2-208ENST00000537429 SLC7A3Q8WY07 619 aa26.95■■□□□ 1.9
HMGA2-208ENST00000537429 CCDC34Q96HJ3 373 aa26.95■■□□□ 1.9
HMGA2-208ENST00000537429 SEZ6LQ9BYH1 1024 aa26.95■■□□□ 1.9
HMGA2-208ENST00000537429 ARVCFO00192 962 aa26.94■■□□□ 1.9
HMGA2-208ENST00000537429 MAGEB2O15479 319 aa26.94■■□□□ 1.9
HMGA2-208ENST00000537429 GUCY2CP25092 1073 aa26.94■■□□□ 1.9
HMGA2-208ENST00000537429 KLHL40Q2TBA0 621 aa26.94■■□□□ 1.9
HMGA2-208ENST00000537429 GDF6Q6KF10 455 aaPredicted RBP26.94■■□□□ 1.9
HMGA2-208ENST00000537429 MTHFD1LQ6UB35 978 aa26.94■■□□□ 1.9
HMGA2-208ENST00000537429 DDX12PQ92771 950 aa26.94■■□□□ 1.9
HMGA2-208ENST00000537429 PAWRQ96IZ0 340 aaKnown RBP26.94■■□□□ 1.9
HMGA2-208ENST00000537429 C7orf25Q9BPX7 421 aa26.94■■□□□ 1.9
HMGA2-208ENST00000537429 TRIM9Q9C026 710 aa26.94■■□□□ 1.9
HMGA2-208ENST00000537429 XPNPEP1Q9NQW7 623 aa26.94■■□□□ 1.9
HMGA2-208ENST00000537429 TUBE1Q9UJT0 475 aa26.94■■□□□ 1.9
HMGA2-208ENST00000537429 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.93■■□□□ 1.9
HMGA2-208ENST00000537429 MYL1P05976 194 aa26.93■■□□□ 1.9
HMGA2-208ENST00000537429 CDK7P50613 346 aa26.93■■□□□ 1.9
HMGA2-208ENST00000537429 ZNF200P98182 395 aaPredicted RBP26.93■■□□□ 1.9
HMGA2-208ENST00000537429 EMC2Q15006 297 aa26.93■■□□□ 1.9
HMGA2-208ENST00000537429 CNNM4Q6P4Q7 775 aa26.93■■□□□ 1.9
HMGA2-208ENST00000537429 ZBTB10Q96DT7 871 aa26.93■■□□□ 1.9
HMGA2-208ENST00000537429 JPH2Q9BR39 696 aaPredicted RBP26.93■■□□□ 1.9
HMGA2-208ENST00000537429 C11orf49Q9H6J7 331 aa26.93■■□□□ 1.9
HMGA2-208ENST00000537429 ATP6V0A4Q9HBG4 840 aa26.93■■□□□ 1.9
HMGA2-208ENST00000537429 BMP2KQ9NSY1 1161 aaPredicted RBP26.93■■□□□ 1.9
HMGA2-208ENST00000537429 TREHO43280 583 aa26.92■■□□□ 1.9
HMGA2-208ENST00000537429 ATN1P54259 1190 aaPredicted RBP26.92■■□□□ 1.9
HMGA2-208ENST00000537429 POSTNQ15063 836 aa26.92■■□□□ 1.9
HMGA2-208ENST00000537429 SKOR2Q2VWA4 1001 aaPredicted RBP26.92■■□□□ 1.9
HMGA2-208ENST00000537429 DYMQ7RTS9 669 aa26.92■■□□□ 1.9
HMGA2-208ENST00000537429 MCPH1Q8NEM0 835 aa26.92■■□□□ 1.9
HMGA2-208ENST00000537429 DNAJC19Q96DA6 116 aa26.92■■□□□ 1.9
HMGA2-208ENST00000537429 TIPINQ9BVW5 301 aa26.92■■□□□ 1.9
HMGA2-208ENST00000537429 CLSTN2Q9H4D0 955 aa26.92■■□□□ 1.9
HMGA2-208ENST00000537429 NPHP3-ACAD11A0A0J9YXS1 232 aa26.91■■□□□ 1.9
HMGA2-208ENST00000537429 GTPBP6O43824 516 aaPredicted RBP26.91■■□□□ 1.9
HMGA2-208ENST00000537429 GAS2O43903 313 aaKnown RBP26.91■■□□□ 1.9
HMGA2-208ENST00000537429 PRR29P0C7W0 189 aa26.91■■□□□ 1.9
HMGA2-208ENST00000537429 CASP1P29466 404 aa26.91■■□□□ 1.9
HMGA2-208ENST00000537429 CUL4BQ13620 913 aa26.91■■□□□ 1.9
HMGA2-208ENST00000537429 GIT2Q14161 759 aa26.91■■□□□ 1.9
HMGA2-208ENST00000537429 EFCAB12Q6NXP0 572 aa26.91■■□□□ 1.9
HMGA2-208ENST00000537429 SLC39A5Q6ZMH5 540 aa26.91■■□□□ 1.9
HMGA2-208ENST00000537429 NECAB2Q7Z6G3 386 aa26.91■■□□□ 1.9
HMGA2-208ENST00000537429 LINC01465Q8N7H1 131 aa26.91■■□□□ 1.9
HMGA2-208ENST00000537429 RETREG2Q8NC44 543 aa26.91■■□□□ 1.9
HMGA2-208ENST00000537429 REEP2Q9BRK0 252 aa26.91■■□□□ 1.9
HMGA2-208ENST00000537429 BLZF1Q9H2G9 400 aa26.91■■□□□ 1.9
HMGA2-208ENST00000537429 HOOK1Q9UJC3 728 aaKnown RBP26.91■■□□□ 1.9
HMGA2-208ENST00000537429 PCDHA2Q9Y5H9 948 aa26.91■■□□□ 1.9
HMGA2-208ENST00000537429 TRIP12Q14669 1992 aaPredicted RBP26.91■■□□□ 1.9
HMGA2-208ENST00000537429 SOX10P56693 466 aa26.9■■□□□ 1.9
HMGA2-208ENST00000537429 RAD51AP2Q09MP3 1159 aa26.9■■□□□ 1.9
HMGA2-208ENST00000537429 MAEAQ7L5Y9 396 aa26.9■■□□□ 1.9
HMGA2-208ENST00000537429 NUP62CLQ9H1M0 184 aa26.9■■□□□ 1.9
HMGA2-208ENST00000537429 TRAK2O60296 914 aa26.9■■□□□ 1.9
HMGA2-208ENST00000537429 KRT18P05783 430 aaKnown RBP26.9■■□□□ 1.9
HMGA2-208ENST00000537429 DPYDQ12882 1025 aa26.9■■□□□ 1.9
HMGA2-208ENST00000537429 MAPK7Q13164 816 aa26.9■■□□□ 1.9
HMGA2-208ENST00000537429 MKRN4PQ13434 485 aaPredicted RBP26.9■■□□□ 1.9
HMGA2-208ENST00000537429 PNOCQ13519 176 aa26.9■■□□□ 1.9
HMGA2-208ENST00000537429 CAMK4Q16566 473 aa26.9■■□□□ 1.9
HMGA2-208ENST00000537429 UBE2Q1Q7Z7E8 422 aa26.9■■□□□ 1.9
HMGA2-208ENST00000537429 DAW1Q8N136 415 aa26.9■■□□□ 1.9
HMGA2-208ENST00000537429 LRRC71Q8N4P6 559 aa26.9■■□□□ 1.9
HMGA2-208ENST00000537429 CTAGE1Q96RT6 745 aa26.9■■□□□ 1.9
HMGA2-208ENST00000537429 SUGCTQ9HAC7 445 aa26.9■■□□□ 1.9
HMGA2-208ENST00000537429 ODF2LQ9ULJ1 636 aa26.9■■□□□ 1.9
HMGA2-208ENST00000537429 CACNB1Q02641 598 aaPredicted RBP26.89■■□□□ 1.89
HMGA2-208ENST00000537429 DRP2Q13474 957 aa26.89■■□□□ 1.89
HMGA2-208ENST00000537429 SNX17Q15036 470 aa26.89■■□□□ 1.89
HMGA2-208ENST00000537429 C1orf53Q5VUE5 145 aa26.89■■□□□ 1.89
HMGA2-208ENST00000537429 METTL13Q8N6R0 699 aa26.89■■□□□ 1.89
HMGA2-208ENST00000537429 TMEM143Q96AN5 459 aa26.89■■□□□ 1.89
HMGA2-208ENST00000537429 POLD4Q9HCU8 107 aa26.89■■□□□ 1.89
HMGA2-208ENST00000537429 GPRC5CQ9NQ84 441 aa26.89■■□□□ 1.89
HMGA2-208ENST00000537429 MKI67P46013 3256 aaKnown RBP26.89■■□□□ 1.89
HMGA2-208ENST00000537429 EVPLQ92817 2033 aa26.88■■□□□ 1.89
HMGA2-208ENST00000537429 SMIM35A0A1B0GVV1 85 aa26.88■■□□□ 1.89
HMGA2-208ENST00000537429 RSPH10B2B2RC85 870 aa26.88■■□□□ 1.89
HMGA2-208ENST00000537429 HIP1RO75146 1068 aa26.88■■□□□ 1.89
HMGA2-208ENST00000537429 RSPH10BP0C881 870 aa26.88■■□□□ 1.89
HMGA2-208ENST00000537429 PTGISQ16647 500 aa26.88■■□□□ 1.89
HMGA2-208ENST00000537429 FAM102BQ5T8I3 360 aa26.88■■□□□ 1.89
HMGA2-208ENST00000537429 IER5Q5VY09 327 aa26.88■■□□□ 1.89
HMGA2-208ENST00000537429 TCP11Q8WWU5 503 aa26.88■■□□□ 1.89
HMGA2-208ENST00000537429 TRMT13Q9NUP7 481 aaKnown RBP26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms