RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 NUMBLQ9Y6R0 609 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 CCDC171Q6TFL3 1326 aa11.11□□□□□ -0.63
CPSF7-217ENST00000537162 WDR19Q8NEZ3 1342 aa11.11□□□□□ -0.63
CPSF7-217ENST00000537162 C9IYK1 514 aa11.11□□□□□ -0.63
CPSF7-217ENST00000537162 CAPNS1P04632 268 aa11.11□□□□□ -0.63
CPSF7-217ENST00000537162 MYCLP12524 364 aaPredicted RBP11.11□□□□□ -0.63
CPSF7-217ENST00000537162 UBE3CQ15386 1083 aa11.11□□□□□ -0.63
CPSF7-217ENST00000537162 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.11□□□□□ -0.63
CPSF7-217ENST00000537162 CASD1Q96PB1 797 aa11.11□□□□□ -0.63
CPSF7-217ENST00000537162 FAM126AQ9BYI3 521 aaPredicted RBP11.11□□□□□ -0.63
CPSF7-217ENST00000537162 FAM49AQ9H0Q0 323 aaPredicted RBP11.11□□□□□ -0.63
CPSF7-217ENST00000537162 ZBP1Q9H171 429 aa11.11□□□□□ -0.63
CPSF7-217ENST00000537162 CPVLQ9H3G5 476 aa11.11□□□□□ -0.63
CPSF7-217ENST00000537162 SMOC1Q9H4F8 434 aa11.11□□□□□ -0.63
CPSF7-217ENST00000537162 C1orf115Q9H7X2 142 aa11.11□□□□□ -0.63
CPSF7-217ENST00000537162 WDR6Q9NNW5 1121 aaKnown RBP11.11□□□□□ -0.63
CPSF7-217ENST00000537162 HECTD1Q9ULT8 2610 aa11.11□□□□□ -0.63
CPSF7-217ENST00000537162 CLUHO75153 1309 aa11.1□□□□□ -0.63
CPSF7-217ENST00000537162 IGSF9BQ9UPX0 1349 aa11.1□□□□□ -0.63
CPSF7-217ENST00000537162 KALRNO60229 2985 aa11.1□□□□□ -0.63
CPSF7-217ENST00000537162 C1QL1O75973 258 aa11.1□□□□□ -0.63
CPSF7-217ENST00000537162 MYBP10242 640 aa11.1□□□□□ -0.63
CPSF7-217ENST00000537162 SLC44A4Q53GD3 710 aa11.1□□□□□ -0.63
CPSF7-217ENST00000537162 KIAA1211LQ6NV74 962 aa11.1□□□□□ -0.63
CPSF7-217ENST00000537162 RSPH3Q86UC2 560 aa11.1□□□□□ -0.63
CPSF7-217ENST00000537162 TMEM173Q86WV6 379 aaPredicted RBP11.1□□□□□ -0.63
CPSF7-217ENST00000537162 VPS52Q8N1B4 723 aa11.1□□□□□ -0.63
CPSF7-217ENST00000537162 FAM160A2Q8N612 972 aaPredicted RBP11.1□□□□□ -0.63
CPSF7-217ENST00000537162 GLIS3Q8NEA6 775 aa11.1□□□□□ -0.63
CPSF7-217ENST00000537162 NXPE3Q969Y0 559 aa11.1□□□□□ -0.63
CPSF7-217ENST00000537162 ADAM2Q99965 735 aa11.1□□□□□ -0.63
CPSF7-217ENST00000537162 USP26Q9BXU7 913 aa11.1□□□□□ -0.63
CPSF7-217ENST00000537162 OSBPL6Q9BZF3 934 aa11.1□□□□□ -0.63
CPSF7-217ENST00000537162 TUBE1Q9UJT0 475 aa11.1□□□□□ -0.63
CPSF7-217ENST00000537162 MBLAC1A4D2B0 266 aaPredicted RBP11.09□□□□□ -0.63
CPSF7-217ENST00000537162 SHISA7A6NL88 538 aa11.09□□□□□ -0.63
CPSF7-217ENST00000537162 EIF4E1BA6NMX2 242 aaKnown RBP11.09□□□□□ -0.63
CPSF7-217ENST00000537162 ABCB7O75027 752 aa11.09□□□□□ -0.63
CPSF7-217ENST00000537162 LAMP2P13473 410 aa11.09□□□□□ -0.63
CPSF7-217ENST00000537162 PLA2G2AP14555 144 aa11.09□□□□□ -0.63
CPSF7-217ENST00000537162 HOXC13P31276 330 aa11.09□□□□□ -0.63
CPSF7-217ENST00000537162 PPM1AP35813 382 aa11.09□□□□□ -0.63
CPSF7-217ENST00000537162 METAP2P50579 478 aaKnown RBP eCLIP11.09□□□□□ -0.63
CPSF7-217ENST00000537162 NFX1Q12986 1120 aaKnown RBP11.09□□□□□ -0.63
CPSF7-217ENST00000537162 GRIK4Q16099 956 aa11.09□□□□□ -0.63
CPSF7-217ENST00000537162 ZBTB41Q5SVQ8 909 aa11.09□□□□□ -0.63
CPSF7-217ENST00000537162 GIMAP6Q6P9H5 292 aa11.09□□□□□ -0.63
CPSF7-217ENST00000537162 C15orf39Q6ZRI6 1047 aa11.09□□□□□ -0.63
CPSF7-217ENST00000537162 FGF14Q92915 247 aa11.09□□□□□ -0.63
CPSF7-217ENST00000537162 BOLA2Q9H3K6 86 aa11.09□□□□□ -0.63
CPSF7-217ENST00000537162 RGS18Q9NS28 235 aa11.09□□□□□ -0.63
CPSF7-217ENST00000537162 FAM217BQ9NTX9 383 aaPredicted RBP11.09□□□□□ -0.63
CPSF7-217ENST00000537162 EXOC6BQ9Y2D4 811 aa11.09□□□□□ -0.63
CPSF7-217ENST00000537162 TRPV2Q9Y5S1 764 aa11.09□□□□□ -0.63
CPSF7-217ENST00000537162 SQORQ9Y6N5 450 aa11.09□□□□□ -0.63
CPSF7-217ENST00000537162 NOP56O00567 594 aaKnown RBP11.08□□□□□ -0.64
CPSF7-217ENST00000537162 AXIN1O15169 862 aa11.08□□□□□ -0.64
CPSF7-217ENST00000537162 MAGEA9P43362 315 aa11.08□□□□□ -0.64
CPSF7-217ENST00000537162 RPS9P46781 194 aaKnown RBP11.08□□□□□ -0.64
CPSF7-217ENST00000537162 NOVP48745 357 aa11.08□□□□□ -0.64
CPSF7-217ENST00000537162 TDO2P48775 406 aa11.08□□□□□ -0.64
CPSF7-217ENST00000537162 CLCN4P51793 760 aa11.08□□□□□ -0.64
CPSF7-217ENST00000537162 PRKCQQ04759 706 aa11.08□□□□□ -0.64
CPSF7-217ENST00000537162 PPFIA1Q13136 1202 aa11.08□□□□□ -0.64
CPSF7-217ENST00000537162 PARM1Q6UWI2 310 aa11.08□□□□□ -0.64
CPSF7-217ENST00000537162 CYFIP1Q7L576 1253 aa11.08□□□□□ -0.64
CPSF7-217ENST00000537162 PROSER1Q86XN7 944 aa11.08□□□□□ -0.64
CPSF7-217ENST00000537162 C12orf50Q8NA57 414 aaPredicted RBP11.08□□□□□ -0.64
CPSF7-217ENST00000537162 BCL7CQ8WUZ0 217 aaPredicted RBP11.08□□□□□ -0.64
CPSF7-217ENST00000537162 PDCD2LQ9BRP1 358 aa11.08□□□□□ -0.64
CPSF7-217ENST00000537162 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.08□□□□□ -0.644e-7■■■□□ 16.7
CPSF7-217ENST00000537162 ARRDC1-AS1Q9H2J1 176 aa11.08□□□□□ -0.64
CPSF7-217ENST00000537162 CDHR5Q9HBB8 845 aa11.08□□□□□ -0.64
CPSF7-217ENST00000537162 ZNF287Q9HBT7 754 aa11.08□□□□□ -0.64
CPSF7-217ENST00000537162 KLK13Q9UKR3 277 aa11.08□□□□□ -0.64
CPSF7-217ENST00000537162 CCDC195A0A1B0GUA6 201 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 CHURC1-FNTBB4DL54 471 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 OPLAHO14841 1288 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 HYAL3O43820 417 aaPredicted RBP11.07□□□□□ -0.64
CPSF7-217ENST00000537162 FOXD2O60548 495 aaPredicted RBP11.07□□□□□ -0.64
CPSF7-217ENST00000537162 ZNF806P0C7X5 589 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 MARK3P27448 753 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 FNTBP49356 437 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 IGBP1P78318 339 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 SP4Q02446 784 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 TROAPQ12815 778 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 SEMA3FQ13275 785 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 KCNV1Q6PIU1 500 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 SLC24A5Q71RS6 500 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 VSIG10LQ86VR7 867 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 TMEM87AQ8NBN3 555 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 TMEM40Q8WWA1 233 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 OSBP2Q969R2 916 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 VN1R3Q9BXE9 311 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 CELF4Q9BZC1 486 aaKnown RBP11.07□□□□□ -0.64
CPSF7-217ENST00000537162 TMEM117Q9H0C3 514 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 ATP6V0A4Q9HBG4 840 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 TMEM161AQ9NX61 479 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 ZNF215Q9UL58 517 aaPredicted RBP11.07□□□□□ -0.64
CPSF7-217ENST00000537162 NOC2LQ9Y3T9 749 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms