RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 BRAPQ7Z569 592 aa7.98□□□□□ -1.13
CCDC7-208ENST00000537047 IGSF22Q8N9C0 903 aa7.98□□□□□ -1.13
CCDC7-208ENST00000537047 SHCBP1Q8NEM2 672 aa7.98□□□□□ -1.13
CCDC7-208ENST00000537047 MAGEB10Q96LZ2 347 aaPredicted RBP7.98□□□□□ -1.13
CCDC7-208ENST00000537047 SLC26A4O43511 780 aa7.97□□□□□ -1.13
CCDC7-208ENST00000537047 TRIM61Q5EBN2 209 aa7.97□□□□□ -1.13
CCDC7-208ENST00000537047 SGMS1Q86VZ5 419 aa7.97□□□□□ -1.13
CCDC7-208ENST00000537047 FOXRED1Q96CU9 486 aaPredicted RBP7.97□□□□□ -1.13
CCDC7-208ENST00000537047 ASB1Q9Y576 335 aa7.97□□□□□ -1.13
CCDC7-208ENST00000537047 TCRBV16S1A1N1A0A5B0 115 aa7.96□□□□□ -1.14
CCDC7-208ENST00000537047 SLC12A8A0AV02 714 aa7.96□□□□□ -1.14
CCDC7-208ENST00000537047 E9PSI1 815 aa7.96□□□□□ -1.14
CCDC7-208ENST00000537047 EFCAB14O75071 495 aa7.96□□□□□ -1.14
CCDC7-208ENST00000537047 ZBTB48P10074 688 aaPredicted RBP7.96□□□□□ -1.14
CCDC7-208ENST00000537047 SDHAP31040 664 aa7.96□□□□□ -1.14
CCDC7-208ENST00000537047 TMEM177Q53S58 311 aa7.96□□□□□ -1.14
CCDC7-208ENST00000537047 RTN4RL1Q86UN2 441 aaPredicted RBP7.96□□□□□ -1.14
CCDC7-208ENST00000537047 D2HGDHQ8N465 521 aa7.96□□□□□ -1.14
CCDC7-208ENST00000537047 NEU4Q8WWR8 484 aaPredicted RBP7.96□□□□□ -1.14
CCDC7-208ENST00000537047 CHFRQ96EP1 664 aa7.96□□□□□ -1.14
CCDC7-208ENST00000537047 TRIM8Q9BZR9 551 aa7.96□□□□□ -1.14
CCDC7-208ENST00000537047 IKZF4Q9H2S9 585 aa7.96□□□□□ -1.14
CCDC7-208ENST00000537047 CEP72Q9P209 647 aa7.96□□□□□ -1.14
CCDC7-208ENST00000537047 SFMBT1Q9UHJ3 866 aa7.96□□□□□ -1.14
CCDC7-208ENST00000537047 ATP2C1P98194 919 aaPredicted RBP7.95□□□□□ -1.14
CCDC7-208ENST00000537047 IRF9Q00978 393 aa7.95□□□□□ -1.14
CCDC7-208ENST00000537047 RIN1Q13671 783 aa7.95□□□□□ -1.14
CCDC7-208ENST00000537047 MMRN2Q9H8L6 949 aa7.95□□□□□ -1.14
CCDC7-208ENST00000537047 CTDP1Q9Y5B0 961 aaPredicted RBP7.95□□□□□ -1.14
CCDC7-208ENST00000537047 CAPN14A8MX76 684 aa7.94□□□□□ -1.14
CCDC7-208ENST00000537047 KRT37O76014 449 aa7.94□□□□□ -1.14
CCDC7-208ENST00000537047 APEX1P27695 318 aaKnown RBP7.94□□□□□ -1.14
CCDC7-208ENST00000537047 ANTXR2P58335 489 aa7.94□□□□□ -1.14
CCDC7-208ENST00000537047 C2orf69Q8N8R5 385 aa7.94□□□□□ -1.14
CCDC7-208ENST00000537047 NELFAQ9H3P2 528 aa7.94□□□□□ -1.14
CCDC7-208ENST00000537047 TRIM39Q9HCM9 518 aa7.94□□□□□ -1.14
CCDC7-208ENST00000537047 SH3BP1Q9Y3L3 701 aa7.94□□□□□ -1.14
CCDC7-208ENST00000537047 MCM7P33993 719 aa7.93□□□□□ -1.14
CCDC7-208ENST00000537047 RGS3P49796 1198 aa7.93□□□□□ -1.14
CCDC7-208ENST00000537047 ALDH6A1Q02252 535 aaKnown RBP7.93□□□□□ -1.14
CCDC7-208ENST00000537047 TUBA3CQ13748 450 aa7.93□□□□□ -1.14
CCDC7-208ENST00000537047 TUBA3EQ6PEY2 450 aa7.93□□□□□ -1.14
CCDC7-208ENST00000537047 AMER2Q8N7J2 671 aa7.93□□□□□ -1.14
CCDC7-208ENST00000537047 SRPK1Q96SB4 655 aaKnown RBP7.93□□□□□ -1.14
CCDC7-208ENST00000537047 DVL2O14641 736 aa7.92□□□□□ -1.14
CCDC7-208ENST00000537047 RBL2Q08999 1139 aa7.92□□□□□ -1.14
CCDC7-208ENST00000537047 CALML6Q8TD86 181 aa7.92□□□□□ -1.14
CCDC7-208ENST00000537047 HIRIP3Q9BW71 556 aaPredicted RBP7.92□□□□□ -1.14
CCDC7-208ENST00000537047 C11orf21Q9P2W6 132 aa7.92□□□□□ -1.14
CCDC7-208ENST00000537047 HIP1RO75146 1068 aa7.91□□□□□ -1.14
CCDC7-208ENST00000537047 HHEXQ03014 270 aa7.91□□□□□ -1.14
CCDC7-208ENST00000537047 KRTAP1-1Q07627 177 aa7.91□□□□□ -1.14
CCDC7-208ENST00000537047 RRP1BQ14684 758 aaKnown RBP7.91□□□□□ -1.14
CCDC7-208ENST00000537047 ADGRE4PQ86SQ3 457 aa7.91□□□□□ -1.14
CCDC7-208ENST00000537047 JMYQ8N9B5 988 aa7.91□□□□□ -1.14
CCDC7-208ENST00000537047 LARP4BQ92615 738 aaKnown RBP7.91□□□□□ -1.14
CCDC7-208ENST00000537047 RPL10LQ96L21 214 aaKnown RBP7.91□□□□□ -1.14
CCDC7-208ENST00000537047 SLC2A4RGQ9NR83 387 aa7.91□□□□□ -1.14
CCDC7-208ENST00000537047 GIT1Q9Y2X7 761 aa7.91□□□□□ -1.14
CCDC7-208ENST00000537047 WDR33Q9C0J8 1336 aaKnown RBP7.9□□□□□ -1.14
CCDC7-208ENST00000537047 A0A1W2PRX2 142 aa7.9□□□□□ -1.14
CCDC7-208ENST00000537047 C2orf78A6NCI8 922 aa7.9□□□□□ -1.14
CCDC7-208ENST00000537047 ADCY7P51828 1080 aa7.9□□□□□ -1.14
CCDC7-208ENST00000537047 SLC6A3Q01959 620 aa7.9□□□□□ -1.14
CCDC7-208ENST00000537047 DPTQ07507 201 aa7.9□□□□□ -1.14
CCDC7-208ENST00000537047 ZC3H12BQ5HYM0 836 aaKnown RBP7.9□□□□□ -1.14
CCDC7-208ENST00000537047 Q6ZRM9 215 aa7.9□□□□□ -1.14
CCDC7-208ENST00000537047 ZNF627Q7L945 461 aa7.9□□□□□ -1.14
CCDC7-208ENST00000537047 LRP10Q7Z4F1 713 aa7.9□□□□□ -1.14
CCDC7-208ENST00000537047 LILRB2Q8N423 598 aa7.9□□□□□ -1.14
CCDC7-208ENST00000537047 CLUHP3Q96NS8 147 aa7.9□□□□□ -1.14
CCDC7-208ENST00000537047 CEP89Q96ST8 783 aa7.9□□□□□ -1.14
CCDC7-208ENST00000537047 GPHA2Q96T91 129 aa7.9□□□□□ -1.14
CCDC7-208ENST00000537047 MSL2Q9HCI7 577 aa7.9□□□□□ -1.14
CCDC7-208ENST00000537047 RBM8AQ9Y5S9 174 aaKnown RBP7.9□□□□□ -1.14
CCDC7-208ENST00000537047 PTCH2Q9Y6C5 1203 aa7.9□□□□□ -1.14
CCDC7-208ENST00000537047 M0R2C6 588 aa7.89□□□□□ -1.15
CCDC7-208ENST00000537047 KCNQ2O43526 872 aa7.89□□□□□ -1.15
CCDC7-208ENST00000537047 RAPGEF3O95398 923 aa7.89□□□□□ -1.15
CCDC7-208ENST00000537047 MECP2P51608 486 aaKnown RBP7.89□□□□□ -1.15
CCDC7-208ENST00000537047 ADAM8P78325 824 aa7.89□□□□□ -1.15
CCDC7-208ENST00000537047 SMN1Q16637 294 aaKnown RBP7.89□□□□□ -1.15
CCDC7-208ENST00000537047 OTOP1Q7RTM1 612 aa7.89□□□□□ -1.15
CCDC7-208ENST00000537047 RABGGTAQ92696 567 aa7.89□□□□□ -1.15
CCDC7-208ENST00000537047 FOXB1Q99853 325 aa7.89□□□□□ -1.15
CCDC7-208ENST00000537047 MRPL4Q9BYD3 311 aaKnown RBP7.89□□□□□ -1.15
CCDC7-208ENST00000537047 ZNF703Q9H7S9 590 aaPredicted RBP7.89□□□□□ -1.15
CCDC7-208ENST00000537047 NCOA5Q9HCD5 579 aaKnown RBP7.89□□□□□ -1.15
CCDC7-208ENST00000537047 KRTAP23-1A1A580 65 aa7.88□□□□□ -1.15
CCDC7-208ENST00000537047 PMS2P1A4D2B8 440 aa7.88□□□□□ -1.15
CCDC7-208ENST00000537047 GLRX3O76003 335 aaKnown RBP7.88□□□□□ -1.15
CCDC7-208ENST00000537047 PRLP01236 227 aa7.88□□□□□ -1.15
CCDC7-208ENST00000537047 SCNN1GP51170 649 aa7.88□□□□□ -1.15
CCDC7-208ENST00000537047 CRHR2Q13324 411 aa7.88□□□□□ -1.15
CCDC7-208ENST00000537047 CC2D1AQ6P1N0 951 aaPredicted RBP7.88□□□□□ -1.15
CCDC7-208ENST00000537047 KLHDC10Q6PID8 442 aa7.88□□□□□ -1.15
CCDC7-208ENST00000537047 LDLRAD3Q86YD5 345 aa7.88□□□□□ -1.15
CCDC7-208ENST00000537047 TMPRSS6Q8IU80 811 aa7.88□□□□□ -1.15
CCDC7-208ENST00000537047 ANKRD53Q8N9V6 530 aa7.88□□□□□ -1.15
CCDC7-208ENST00000537047 ZSWIM2Q8NEG5 633 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms