RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 OSMRQ99650 979 aa22.27■■□□□ 1.16
TNFRSF1B-204ENST00000536782 VPS54Q9P1Q0 977 aa22.27■■□□□ 1.16
TNFRSF1B-204ENST00000536782 ARIH1Q9Y4X5 557 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF1B-204ENST00000536782 WDR64B1ANS9 1081 aa22.26■■□□□ 1.15
TNFRSF1B-204ENST00000536782 MAGEB2O15479 319 aa22.26■■□□□ 1.15
TNFRSF1B-204ENST00000536782 VTNP04004 478 aa22.26■■□□□ 1.15
TNFRSF1B-204ENST00000536782 PDIA3P30101 505 aaKnown RBP22.26■■□□□ 1.15
TNFRSF1B-204ENST00000536782 EVCP57679 992 aa22.26■■□□□ 1.15
TNFRSF1B-204ENST00000536782 CCT2P78371 535 aaKnown RBP22.26■■□□□ 1.15
TNFRSF1B-204ENST00000536782 ADAM15Q13444 863 aa22.26■■□□□ 1.15
TNFRSF1B-204ENST00000536782 POF1BQ8WVV4 589 aa22.26■■□□□ 1.15
TNFRSF1B-204ENST00000536782 LENG9Q96B70 501 aa22.26■■□□□ 1.15
TNFRSF1B-204ENST00000536782 CCDC136Q96JN2 1154 aa22.26■■□□□ 1.15
TNFRSF1B-204ENST00000536782 SH3GLB2Q9NR46 395 aa22.26■■□□□ 1.15
TNFRSF1B-204ENST00000536782 PCDHB12Q9Y5F1 795 aa22.26■■□□□ 1.15
TNFRSF1B-204ENST00000536782 C19orf67A6NJJ6 358 aa22.25■■□□□ 1.15
TNFRSF1B-204ENST00000536782 TBKBP1A7MCY6 615 aa22.25■■□□□ 1.15
TNFRSF1B-204ENST00000536782 C9IYK1 514 aa22.25■■□□□ 1.15
TNFRSF1B-204ENST00000536782 LINC01565O15544 149 aa22.25■■□□□ 1.15
TNFRSF1B-204ENST00000536782 MBTPS2O43462 519 aa22.25■■□□□ 1.15
TNFRSF1B-204ENST00000536782 TBX10O75333 385 aa22.25■■□□□ 1.15
TNFRSF1B-204ENST00000536782 GPR32O75388 356 aa22.25■■□□□ 1.15
TNFRSF1B-204ENST00000536782 USP11P51784 963 aa22.25■■□□□ 1.15
TNFRSF1B-204ENST00000536782 SMAD2Q15796 467 aaKnown RBP22.25■■□□□ 1.15
TNFRSF1B-204ENST00000536782 SPOUT1Q5T280 376 aaKnown RBP22.25■■□□□ 1.15
TNFRSF1B-204ENST00000536782 FAM228AQ86W67 206 aa22.25■■□□□ 1.15
TNFRSF1B-204ENST00000536782 NCOA5Q9HCD5 579 aaKnown RBP22.25■■□□□ 1.15
TNFRSF1B-204ENST00000536782 AAASQ9NRG9 546 aa22.25■■□□□ 1.15
TNFRSF1B-204ENST00000536782 DISC1Q9NRI5 854 aa22.25■■□□□ 1.15
TNFRSF1B-204ENST00000536782 PRR33A8MZF0 331 aa22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 MSH4O15457 936 aa22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 TMOD1P28289 359 aa22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 HOXD11P31277 338 aaPredicted RBP22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 IRS1P35568 1242 aa22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 NDUFV1P49821 464 aa22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 NLRP5P59047 1200 aa22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 SMAD4Q13485 552 aaKnown RBP22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 FAM102BQ5T8I3 360 aa22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 EFCAB12Q6NXP0 572 aa22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 RUFY3Q7L099 469 aa22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 ADGRD2Q7Z7M1 963 aa22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 MAP7D2Q96T17 732 aa22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 RIT2Q99578 217 aa22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 ATP6V0A4Q9HBG4 840 aa22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 NRBP2Q9NSY0 501 aa22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 TMEM161AQ9NX61 479 aa22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 CD207Q9UJ71 328 aa22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 AKT3Q9Y243 479 aa22.24■■□□□ 1.15
TNFRSF1B-204ENST00000536782 DCXO43602 365 aa22.23■■□□□ 1.15
TNFRSF1B-204ENST00000536782 OATP04181 439 aa22.23■■□□□ 1.15
TNFRSF1B-204ENST00000536782 CLCN3P51790 818 aa22.23■■□□□ 1.15
TNFRSF1B-204ENST00000536782 NLRP11P59045 1033 aaKnown RBP22.23■■□□□ 1.15
TNFRSF1B-204ENST00000536782 UBE3AQ05086 875 aa22.23■■□□□ 1.15
TNFRSF1B-204ENST00000536782 TRIM22Q8IYM9 498 aa22.23■■□□□ 1.15
TNFRSF1B-204ENST00000536782 ZNF710Q8N1W2 664 aa22.23■■□□□ 1.15
TNFRSF1B-204ENST00000536782 POP1Q99575 1024 aaKnown RBP22.23■■□□□ 1.15
TNFRSF1B-204ENST00000536782 UPF3BQ9BZI7 483 aaKnown RBP22.23■■□□□ 1.15
TNFRSF1B-204ENST00000536782 ELAC1Q9H777 363 aaKnown RBP22.23■■□□□ 1.15
TNFRSF1B-204ENST00000536782 TECTAO75443 2155 aa22.22■■□□□ 1.15
TNFRSF1B-204ENST00000536782 EDIL3O43854 480 aa22.22■■□□□ 1.15
TNFRSF1B-204ENST00000536782 GAS7O60861 476 aa22.22■■□□□ 1.15
TNFRSF1B-204ENST00000536782 SFNP31947 248 aa22.22■■□□□ 1.15
TNFRSF1B-204ENST00000536782 NRIP1P48552 1158 aa22.22■■□□□ 1.15
TNFRSF1B-204ENST00000536782 JAK3P52333 1124 aa22.22■■□□□ 1.15
TNFRSF1B-204ENST00000536782 FAM189BP81408 668 aa22.22■■□□□ 1.15
TNFRSF1B-204ENST00000536782 SSRP1Q08945 709 aaKnown RBP22.22■■□□□ 1.15
TNFRSF1B-204ENST00000536782 DSC3Q14574 896 aa22.22■■□□□ 1.15
TNFRSF1B-204ENST00000536782 LINC01465Q8N7H1 131 aa22.22■■□□□ 1.15
TNFRSF1B-204ENST00000536782 EFHBQ8N7U6 833 aa22.22■■□□□ 1.15
TNFRSF1B-204ENST00000536782 MICAL1Q8TDZ2 1067 aa22.22■■□□□ 1.15
TNFRSF1B-204ENST00000536782 SLC5A5Q92911 643 aa22.22■■□□□ 1.15
TNFRSF1B-204ENST00000536782 TEKT3Q9BXF9 490 aa22.22■■□□□ 1.15
TNFRSF1B-204ENST00000536782 C22orf23Q9BZE7 217 aa22.22■■□□□ 1.15
TNFRSF1B-204ENST00000536782 ZSWIM6Q9HCJ5 1215 aa22.22■■□□□ 1.15
TNFRSF1B-204ENST00000536782 TYW1Q9NV66 732 aaKnown RBP22.22■■□□□ 1.15
TNFRSF1B-204ENST00000536782 EPB41L2O43491 1005 aaKnown RBP22.21■■□□□ 1.15
TNFRSF1B-204ENST00000536782 CHMP2AO43633 222 aa22.21■■□□□ 1.15
TNFRSF1B-204ENST00000536782 ZNF862O60290 1169 aa22.21■■□□□ 1.15
TNFRSF1B-204ENST00000536782 FGFR1P11362 822 aa22.21■■□□□ 1.15
TNFRSF1B-204ENST00000536782 PRKCEQ02156 737 aa22.21■■□□□ 1.15
TNFRSF1B-204ENST00000536782 TOB2Q14106 344 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1B-204ENST00000536782 CSPP1Q1MSJ5 1256 aa22.21■■□□□ 1.15
TNFRSF1B-204ENST00000536782 LRCH2Q5VUJ6 765 aa22.21■■□□□ 1.15
TNFRSF1B-204ENST00000536782 RBM23Q86U06 439 aaKnown RBP22.21■■□□□ 1.15
TNFRSF1B-204ENST00000536782 THNSL1Q8IYQ7 743 aa22.21■■□□□ 1.15
TNFRSF1B-204ENST00000536782 LRRC71Q8N4P6 559 aa22.21■■□□□ 1.15
TNFRSF1B-204ENST00000536782 TBCKQ8TEA7 893 aa22.21■■□□□ 1.15
TNFRSF1B-204ENST00000536782 MSLNLQ96KJ4 702 aa22.21■■□□□ 1.15
TNFRSF1B-204ENST00000536782 ADAMTS10Q9H324 1103 aa22.21■■□□□ 1.15
TNFRSF1B-204ENST00000536782 PCDHA4Q9UN74 947 aa22.21■■□□□ 1.15
TNFRSF1B-204ENST00000536782 CPLX1O14810 134 aa22.2■■□□□ 1.14
TNFRSF1B-204ENST00000536782 FGF18O76093 207 aa22.2■■□□□ 1.14
TNFRSF1B-204ENST00000536782 ZSCAN20P17040 1043 aaPredicted RBP22.2■■□□□ 1.14
TNFRSF1B-204ENST00000536782 COLGALT1Q8NBJ5 622 aa22.2■■□□□ 1.14
TNFRSF1B-204ENST00000536782 UNC45AQ9H3U1 944 aa22.2■■□□□ 1.14
TNFRSF1B-204ENST00000536782 TLE6Q9H808 572 aa22.2■■□□□ 1.14
TNFRSF1B-204ENST00000536782 TLR9Q9NR96 1032 aa22.2■■□□□ 1.14
TNFRSF1B-204ENST00000536782 CLEC1BQ9P126 229 aa22.2■■□□□ 1.14
TNFRSF1B-204ENST00000536782 CYP46A1Q9Y6A2 500 aa22.2■■□□□ 1.14
TNFRSF1B-204ENST00000536782 HOXA2O43364 376 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms